RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 MPZL2O60487 215 aa9.26□□□□□ -0.93
SQSTM1-203ENST00000422245 ALX3O95076 343 aa9.26□□□□□ -0.93
SQSTM1-203ENST00000422245 FADS2O95864 444 aaKnown RBP9.26□□□□□ -0.93
SQSTM1-203ENST00000422245 IGLV1-47P01700 117 aa9.26□□□□□ -0.93
SQSTM1-203ENST00000422245 CCDC159P0C7I6 412 aa9.26□□□□□ -0.93
SQSTM1-203ENST00000422245 DBTP11182 482 aaKnown RBP9.26□□□□□ -0.93
SQSTM1-203ENST00000422245 CEACAM3P40198 252 aa9.26□□□□□ -0.93
SQSTM1-203ENST00000422245 GLIPR1P48060 266 aa9.26□□□□□ -0.93
SQSTM1-203ENST00000422245 AESQ08117 197 aa9.26□□□□□ -0.93
SQSTM1-203ENST00000422245 GALEQ14376 348 aa9.26□□□□□ -0.93
SQSTM1-203ENST00000422245 KPNB1Q14974 876 aaKnown RBP9.26□□□□□ -0.93
SQSTM1-203ENST00000422245 HLA-DRB5Q30154 266 aa9.26□□□□□ -0.93
SQSTM1-203ENST00000422245 TMEM95Q3KNT9 176 aa9.26□□□□□ -0.93
SQSTM1-203ENST00000422245 CCDC144NLQ6NUI1 221 aa9.26□□□□□ -0.93
SQSTM1-203ENST00000422245 CBR4Q8N4T8 237 aa9.26□□□□□ -0.93
SQSTM1-203ENST00000422245 OR4D6Q8NGJ1 314 aa9.26□□□□□ -0.93
SQSTM1-203ENST00000422245 OR5D14Q8NGL3 314 aa9.26□□□□□ -0.93
SQSTM1-203ENST00000422245 HAVCR2Q8TDQ0 301 aa9.26□□□□□ -0.93
SQSTM1-203ENST00000422245 COQ2Q96H96 371 aa9.26□□□□□ -0.93
SQSTM1-203ENST00000422245 SPACA5Q96QH8 159 aa9.26□□□□□ -0.93
SQSTM1-203ENST00000422245 MMP28Q9H239 520 aa9.26□□□□□ -0.93
SQSTM1-203ENST00000422245 OR6C3Q9NZP0 311 aa9.26□□□□□ -0.93
SQSTM1-203ENST00000422245 MYRFQ9Y2G1 1151 aa9.26□□□□□ -0.93
SQSTM1-203ENST00000422245 GMPPBQ9Y5P6 360 aa9.26□□□□□ -0.93
SQSTM1-203ENST00000422245 KIAA2026Q5HYC2 2103 aa9.25□□□□□ -0.93
SQSTM1-203ENST00000422245 A0A087X0M5 115 aa9.25□□□□□ -0.93
SQSTM1-203ENST00000422245 A0A1B0GX30 115 aa9.25□□□□□ -0.93
SQSTM1-203ENST00000422245 ZNF729A6NN14 1252 aaPredicted RBP9.25□□□□□ -0.93
SQSTM1-203ENST00000422245 OOSP1A8MZH6 123 aa9.25□□□□□ -0.93
SQSTM1-203ENST00000422245 H3BNX3 289 aa9.25□□□□□ -0.93
SQSTM1-203ENST00000422245 SLC33A1O00400 549 aaPredicted RBP9.25□□□□□ -0.93
SQSTM1-203ENST00000422245 TOR1AO14656 332 aa9.25□□□□□ -0.93
SQSTM1-203ENST00000422245 PIN1P1O15428 100 aa9.25□□□□□ -0.93
SQSTM1-203ENST00000422245 OR2F2O95006 317 aa9.25□□□□□ -0.93
SQSTM1-203ENST00000422245 HCKP08631 526 aa9.25□□□□□ -0.93
SQSTM1-203ENST00000422245 TMEM225BP0DP42 221 aa9.25□□□□□ -0.93
SQSTM1-203ENST00000422245 GABRB1P18505 474 aa9.25□□□□□ -0.93
SQSTM1-203ENST00000422245 MTNR1BP49286 362 aa9.25□□□□□ -0.93
SQSTM1-203ENST00000422245 ZP1P60852 638 aa9.25□□□□□ -0.93
SQSTM1-203ENST00000422245 ATXN7L3Q14CW9 347 aaPredicted RBP9.25□□□□□ -0.93
SQSTM1-203ENST00000422245 KISS1Q15726 138 aa9.25□□□□□ -0.93
SQSTM1-203ENST00000422245 ZIK1Q3SY52 487 aaPredicted RBP9.25□□□□□ -0.93
SQSTM1-203ENST00000422245 FBLN7Q53RD9 439 aa9.25□□□□□ -0.93
SQSTM1-203ENST00000422245 KRBOX4Q5JUW0 171 aa9.25□□□□□ -0.93
SQSTM1-203ENST00000422245 Q6P435 159 aa9.25□□□□□ -0.93
SQSTM1-203ENST00000422245 BAIAP2L2Q6UXY1 529 aa9.25□□□□□ -0.93
SQSTM1-203ENST00000422245 Q6ZS46 218 aa9.25□□□□□ -0.93
SQSTM1-203ENST00000422245 SERPINA12Q8IW75 414 aa9.25□□□□□ -0.93
SQSTM1-203ENST00000422245 PARP16Q8N5Y8 322 aa9.25□□□□□ -0.93
SQSTM1-203ENST00000422245 TSEN15Q8WW01 171 aaKnown RBP9.25□□□□□ -0.93
SQSTM1-203ENST00000422245 Q96MT0 163 aa9.25□□□□□ -0.93
SQSTM1-203ENST00000422245 OCSTAMPQ9BR26 566 aa9.25□□□□□ -0.93
SQSTM1-203ENST00000422245 ZNF286AQ9HBT8 521 aa9.25□□□□□ -0.93
SQSTM1-203ENST00000422245 DHDHQ9UQ10 334 aa9.25□□□□□ -0.93
SQSTM1-203ENST00000422245 FAM172BPA6NC97 362 aa9.24□□□□□ -0.93
SQSTM1-203ENST00000422245 M0QZK8 103 aa9.24□□□□□ -0.93
SQSTM1-203ENST00000422245 DEGS1O15121 323 aa9.24□□□□□ -0.93
SQSTM1-203ENST00000422245 ZFPL1O95159 310 aa9.24□□□□□ -0.93
SQSTM1-203ENST00000422245 GDNFP39905 211 aa9.24□□□□□ -0.93
SQSTM1-203ENST00000422245 MNDAP41218 407 aa9.24□□□□□ -0.93
SQSTM1-203ENST00000422245 GLP1RP43220 463 aa9.24□□□□□ -0.93
SQSTM1-203ENST00000422245 PRRX1P54821 245 aa9.24□□□□□ -0.93
SQSTM1-203ENST00000422245 CD83Q01151 205 aa9.24□□□□□ -0.93
SQSTM1-203ENST00000422245 SCN1BQ07699 218 aa9.24□□□□□ -0.93
SQSTM1-203ENST00000422245 RAB40BQ12829 278 aa9.24□□□□□ -0.93
SQSTM1-203ENST00000422245 TPTE2P1Q5T6R2 138 aa9.24□□□□□ -0.93
SQSTM1-203ENST00000422245 ZNF691Q5VV52 312 aa9.24□□□□□ -0.93
SQSTM1-203ENST00000422245 ELP2Q6IA86 826 aa9.24□□□□□ -0.93
SQSTM1-203ENST00000422245 Q6ZPA2 131 aa9.24□□□□□ -0.93
SQSTM1-203ENST00000422245 RNF144BQ7Z419 303 aa9.24□□□□□ -0.93
SQSTM1-203ENST00000422245 LHFPL3Q86UP9 236 aa9.24□□□□□ -0.93
SQSTM1-203ENST00000422245 C10orf67Q8IYJ2 551 aa9.24□□□□□ -0.93
SQSTM1-203ENST00000422245 OR5AU1Q8NGC0 362 aa9.24□□□□□ -0.93
SQSTM1-203ENST00000422245 OR4X2Q8NGF9 303 aa9.24□□□□□ -0.93
SQSTM1-203ENST00000422245 OR5AK2Q8NH90 309 aa9.24□□□□□ -0.93
SQSTM1-203ENST00000422245 STMN2Q93045 179 aa9.24□□□□□ -0.93
SQSTM1-203ENST00000422245 SLC25A33Q9BSK2 321 aa9.24□□□□□ -0.93
SQSTM1-203ENST00000422245 C9orf16Q9BUW7 83 aa9.24□□□□□ -0.93
SQSTM1-203ENST00000422245 NCOR1P1Q9H4R4 102 aa9.24□□□□□ -0.93
SQSTM1-203ENST00000422245 PCDHB16Q9NRJ7 776 aa9.24□□□□□ -0.93
SQSTM1-203ENST00000422245 NECAP2Q9NVZ3 263 aa9.24□□□□□ -0.93
SQSTM1-203ENST00000422245 ERVK13-1Q9NX77 482 aa9.24□□□□□ -0.93
SQSTM1-203ENST00000422245 AMMECR1Q9Y4X0 333 aaPredicted RBP9.24□□□□□ -0.93
SQSTM1-203ENST00000422245 KBTBD11-OT1A0A1B0GTJ5 212 aa9.23□□□□□ -0.93
SQSTM1-203ENST00000422245 H0YJX3 145 aa9.23□□□□□ -0.93
SQSTM1-203ENST00000422245 BUB1B-PAK6H3BSN5 160 aa9.23□□□□□ -0.93
SQSTM1-203ENST00000422245 MAGEB3O15480 346 aa9.23□□□□□ -0.93
SQSTM1-203ENST00000422245 PRB2P02812 416 aaPredicted RBP9.23□□□□□ -0.93
SQSTM1-203ENST00000422245 PF4V1P10720 104 aa9.23□□□□□ -0.93
SQSTM1-203ENST00000422245 RAB3AP20336 220 aa9.23□□□□□ -0.93
SQSTM1-203ENST00000422245 OR3A4PP47883 348 aa9.23□□□□□ -0.93
SQSTM1-203ENST00000422245 KCNJ3P48549 501 aa9.23□□□□□ -0.93
SQSTM1-203ENST00000422245 GBX2P52951 348 aaPredicted RBP9.23□□□□□ -0.93
SQSTM1-203ENST00000422245 PAX5Q02548 391 aa9.23□□□□□ -0.93
SQSTM1-203ENST00000422245 RBM39Q14498 530 aaKnown RBP9.23□□□□□ -0.93
SQSTM1-203ENST00000422245 IL13RA2Q14627 380 aa9.23□□□□□ -0.93
SQSTM1-203ENST00000422245 CDK5R1Q15078 307 aa9.23□□□□□ -0.93
SQSTM1-203ENST00000422245 C17orf58Q2M2W7 97 aa9.23□□□□□ -0.93
SQSTM1-203ENST00000422245 PAN3Q58A45 887 aaKnown RBP9.23□□□□□ -0.93
SQSTM1-203ENST00000422245 OXLD1Q5BKU9 147 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms