RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 ACOT13Q9NPJ3 140 aa14.92□□□□□ -0.02
ECHDC3-202ENST00000420401 A0A0G2JK05 382 aa14.91□□□□□ -0.02
ECHDC3-202ENST00000420401 ERP29P30040 261 aaKnown RBP14.91□□□□□ -0.02
ECHDC3-202ENST00000420401 OR3A1P47881 315 aa14.91□□□□□ -0.02
ECHDC3-202ENST00000420401 INSL4Q14641 139 aa14.91□□□□□ -0.02
ECHDC3-202ENST00000420401 HSD17B12Q53GQ0 312 aa14.91□□□□□ -0.02
ECHDC3-202ENST00000420401 OR10K1Q8NGX5 313 aa14.91□□□□□ -0.02
ECHDC3-202ENST00000420401 TNFRSF14Q92956 283 aa14.91□□□□□ -0.02
ECHDC3-202ENST00000420401 ZNF48Q96MX3 618 aaPredicted RBP14.91□□□□□ -0.02
ECHDC3-202ENST00000420401 NKX3-1Q99801 234 aaPredicted RBP14.91□□□□□ -0.02
ECHDC3-202ENST00000420401 SLITRK2Q9H156 845 aa14.91□□□□□ -0.02
ECHDC3-202ENST00000420401 SOX21Q9Y651 276 aaPredicted RBP14.91□□□□□ -0.02
ECHDC3-202ENST00000420401 TGP01266 2768 aa14.91□□□□□ -0.02
ECHDC3-202ENST00000420401 TMEM89A2RUT3 159 aa14.9□□□□□ -0.02
ECHDC3-202ENST00000420401 RNASEK-C17orf49H0YIS7 233 aa14.9□□□□□ -0.02
ECHDC3-202ENST00000420401 SLC33A1O00400 549 aaPredicted RBP14.9□□□□□ -0.02
ECHDC3-202ENST00000420401 UBE2E1P51965 193 aa14.9□□□□□ -0.02
ECHDC3-202ENST00000420401 EMX1Q04741 257 aaPredicted RBP14.9□□□□□ -0.02
ECHDC3-202ENST00000420401 ZNF273Q14593 569 aa14.9□□□□□ -0.02
ECHDC3-202ENST00000420401 DEFB112Q30KQ8 113 aa14.9□□□□□ -0.02
ECHDC3-202ENST00000420401 OSR2Q8N2R0 312 aa14.9□□□□□ -0.02
ECHDC3-202ENST00000420401 ZDHHC22Q8N966 263 aa14.9□□□□□ -0.02
ECHDC3-202ENST00000420401 MUL1Q969V5 352 aa14.9□□□□□ -0.02
ECHDC3-202ENST00000420401 FOXRED1Q96CU9 486 aaPredicted RBP14.9□□□□□ -0.02
ECHDC3-202ENST00000420401 UQCC2Q9BRT2 126 aa14.9□□□□□ -0.02
ECHDC3-202ENST00000420401 HEXA-AS1Q9H8Q6 139 aa14.9□□□□□ -0.02
ECHDC3-202ENST00000420401 ZMAT3Q9HA38 289 aaKnown RBP14.9□□□□□ -0.02
ECHDC3-202ENST00000420401 ST3GAL6Q9Y274 331 aa14.9□□□□□ -0.02
ECHDC3-202ENST00000420401 MRPS28Q9Y2Q9 187 aaKnown RBP14.9□□□□□ -0.02
ECHDC3-202ENST00000420401 SF3B6Q9Y3B4 125 aaKnown RBP14.9□□□□□ -0.02
ECHDC3-202ENST00000420401 LRRC42Q9Y546 428 aa14.9□□□□□ -0.02
ECHDC3-202ENST00000420401 PKD1L1Q8TDX9 2849 aa14.9□□□□□ -0.02
ECHDC3-202ENST00000420401 NPFFO15130 113 aa14.89□□□□□ -0.03
ECHDC3-202ENST00000420401 RRP9O43818 475 aaKnown RBP14.89□□□□□ -0.03
ECHDC3-202ENST00000420401 SC5DO75845 299 aa14.89□□□□□ -0.03
ECHDC3-202ENST00000420401 CSN2P05814 226 aa14.89□□□□□ -0.03
ECHDC3-202ENST00000420401 UCHL1P09936 223 aa14.89□□□□□ -0.03
ECHDC3-202ENST00000420401 ZNF728P0DKX0 622 aa14.89□□□□□ -0.03
ECHDC3-202ENST00000420401 GTF2F2P13984 249 aa14.89□□□□□ -0.03
ECHDC3-202ENST00000420401 CCL3L1P16619 93 aa14.89□□□□□ -0.03
ECHDC3-202ENST00000420401 SRMP19623 302 aa14.89□□□□□ -0.03
ECHDC3-202ENST00000420401 SERPINA2P20848 420 aa14.89□□□□□ -0.03
ECHDC3-202ENST00000420401 P2RX3P56373 397 aa14.89□□□□□ -0.03
ECHDC3-202ENST00000420401 ERVFRD-1P60508 538 aa14.89□□□□□ -0.03
ECHDC3-202ENST00000420401 RPS25P62851 125 aaKnown RBP14.89□□□□□ -0.03
ECHDC3-202ENST00000420401 PIGYQ3MUY2 71 aa14.89□□□□□ -0.03
ECHDC3-202ENST00000420401 SLC22A6Q4U2R8 563 aa14.89□□□□□ -0.03
ECHDC3-202ENST00000420401 NHLRC3Q5JS37 347 aa14.89□□□□□ -0.03
ECHDC3-202ENST00000420401 FAM27D1Q5T7N8 215 aa14.89□□□□□ -0.03
ECHDC3-202ENST00000420401 AWAT2Q6E213 333 aa14.89□□□□□ -0.03
ECHDC3-202ENST00000420401 GLIPR1L1Q6UWM5 242 aa14.89□□□□□ -0.03
ECHDC3-202ENST00000420401 LINC00596Q86U02 117 aa14.89□□□□□ -0.03
ECHDC3-202ENST00000420401 FAM216AQ8WUB2 273 aa14.89□□□□□ -0.03
ECHDC3-202ENST00000420401 ZNF714Q96N38 554 aa14.89□□□□□ -0.03
ECHDC3-202ENST00000420401 PPA2Q9H2U2 334 aa14.89□□□□□ -0.03
ECHDC3-202ENST00000420401 PRDM13Q9H4Q3 707 aa14.89□□□□□ -0.03
ECHDC3-202ENST00000420401 ESM1Q9NQ30 184 aa14.89□□□□□ -0.03
ECHDC3-202ENST00000420401 FAM96BQ9Y3D0 163 aa14.89□□□□□ -0.03
ECHDC3-202ENST00000420401 LINC00312Q9Y6C7 94 aa14.89□□□□□ -0.03
ECHDC3-202ENST00000420401 C17orf98A8MV24 154 aa14.88□□□□□ -0.03
ECHDC3-202ENST00000420401 ARL6IP5O75915 188 aa14.88□□□□□ -0.03
ECHDC3-202ENST00000420401 RBP4P02753 201 aa14.88□□□□□ -0.03
ECHDC3-202ENST00000420401 GABRA5P31644 462 aa14.88□□□□□ -0.03
ECHDC3-202ENST00000420401 GP2P55259 537 aaKnown RBP14.88□□□□□ -0.03
ECHDC3-202ENST00000420401 DLX1P56177 255 aa14.88□□□□□ -0.03
ECHDC3-202ENST00000420401 UBA52P62987 128 aaKnown RBP14.88□□□□□ -0.03
ECHDC3-202ENST00000420401 PRB3Q04118 309 aaPredicted RBP14.88□□□□□ -0.03
ECHDC3-202ENST00000420401 KLRD1Q13241 179 aa14.88□□□□□ -0.03
ECHDC3-202ENST00000420401 PAN3Q58A45 887 aaKnown RBP14.88□□□□□ -0.03
ECHDC3-202ENST00000420401 GLT8D1Q68CQ7 371 aa14.88□□□□□ -0.03
ECHDC3-202ENST00000420401 TRAPPC6BQ86SZ2 158 aa14.88□□□□□ -0.03
ECHDC3-202ENST00000420401 SPARTQ8N0X7 666 aa14.88□□□□□ -0.03
ECHDC3-202ENST00000420401 PIP4P2Q8N4L2 257 aa14.88□□□□□ -0.03
ECHDC3-202ENST00000420401 C11orf42Q8N5U0 333 aa14.88□□□□□ -0.03
ECHDC3-202ENST00000420401 TPRX1Q8N7U7 411 aa14.88□□□□□ -0.03
ECHDC3-202ENST00000420401 MRPS24Q96EL2 167 aaKnown RBP14.88□□□□□ -0.03
ECHDC3-202ENST00000420401 UBE2J1Q9Y385 318 aaPredicted RBP14.88□□□□□ -0.03
ECHDC3-202ENST00000420401 TRGV10A0A0A0MS01 117 aa14.87□□□□□ -0.03
ECHDC3-202ENST00000420401 MDFIC2A0A1B0GVS7 189 aa14.87□□□□□ -0.03
ECHDC3-202ENST00000420401 DNAJC9-AS1A6NH13 148 aa14.87□□□□□ -0.03
ECHDC3-202ENST00000420401 CLDN34H7C241 214 aa14.87□□□□□ -0.03
ECHDC3-202ENST00000420401 DLX6P56179 175 aa14.87□□□□□ -0.03
ECHDC3-202ENST00000420401 RBM11P57052 281 aaKnown RBP14.87□□□□□ -0.03
ECHDC3-202ENST00000420401 AESQ08117 197 aa14.87□□□□□ -0.03
ECHDC3-202ENST00000420401 KRBOX4Q5JUW0 171 aa14.87□□□□□ -0.03
ECHDC3-202ENST00000420401 Q6YL49 198 aa14.87□□□□□ -0.03
ECHDC3-202ENST00000420401 TMEM91Q6ZNR0 172 aa14.87□□□□□ -0.03
ECHDC3-202ENST00000420401 LRRTM1Q86UE6 522 aa14.87□□□□□ -0.03
ECHDC3-202ENST00000420401 LYPD6Q86Y78 171 aa14.87□□□□□ -0.03
ECHDC3-202ENST00000420401 OR4D6Q8NGJ1 314 aa14.87□□□□□ -0.03
ECHDC3-202ENST00000420401 FCGR1BQ92637 280 aa14.87□□□□□ -0.03
ECHDC3-202ENST00000420401 SLC25A28Q96A46 364 aa14.87□□□□□ -0.03
ECHDC3-202ENST00000420401 BARHL1Q9BZE3 327 aa14.87□□□□□ -0.03
ECHDC3-202ENST00000420401 IFT22Q9H7X7 185 aa14.87□□□□□ -0.03
ECHDC3-202ENST00000420401 GHRLQ9UBU3 117 aa14.87□□□□□ -0.03
ECHDC3-202ENST00000420401 TRAV24A0A0B4J272 114 aa14.86□□□□□ -0.03
ECHDC3-202ENST00000420401 A0A0U1RQK1 487 aa14.86□□□□□ -0.03
ECHDC3-202ENST00000420401 A0A1W2PRD5 423 aa14.86□□□□□ -0.03
ECHDC3-202ENST00000420401 A0A1W2PRF3 423 aa14.86□□□□□ -0.03
ECHDC3-202ENST00000420401 A0A1W2PRM7 423 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms