RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 FAAP20Q6NZ36 180 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 ACP7Q6ZNF0 438 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 C22orf34Q6ZV56 151 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 GDPD3Q7L5L3 318 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 RTN4RL2Q86UN3 420 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 MUC15Q8N387 334 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 ZNF843Q8N446 348 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 ARRDC1Q8N5I2 433 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 ASCC1Q8N9N2 400 aaKnown RBP5.04□□□□□ -1.6
HMGB3-202ENST00000419110 BEST4Q8NFU0 473 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 OR4K15Q8NH41 348 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 OR56B4Q8NH76 319 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 PPP1R35Q8TAP8 253 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 Q8TCH9 128 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 SNAPC3Q92966 411 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 UPRTQ96BW1 309 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 SULT4A1Q9BR01 284 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 GINS4Q9BRT9 223 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 DPCDQ9BVM2 203 aaPredicted RBP5.04□□□□□ -1.6
HMGB3-202ENST00000419110 CACNG6Q9BXT2 260 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 DNTTIP1Q9H147 329 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 PPA2Q9H2U2 334 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 RIMS4Q9H426 269 aaPredicted RBP5.04□□□□□ -1.6
HMGB3-202ENST00000419110 HES4Q9HCC6 221 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 DECR2Q9NUI1 292 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 SLC2A8Q9NY64 477 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 ETAA1Q9NY74 926 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 RASL12Q9NYN1 266 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 EHFQ9NZC4 300 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 RNF7Q9UBF6 113 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 IL36RNQ9UBH0 155 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 MGAT4AQ9UM21 535 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 ABCA4P78363 2273 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 TRAV6A0A075B6T7 132 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 A0A1B0GVG6 124 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 TMEM30CPA0ZSE6 113 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 UBE2QL1A1L167 161 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 WIPF3A6NGB9 483 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 E7EQL1 145 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 F8VVB4 439 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 F8VWA3 439 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 INMT-MINDY4F8WBC2 141 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 M0QYG6 137 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 ARPC1BO15143 372 aaKnown RBP5.03□□□□□ -1.6
HMGB3-202ENST00000419110 PFDN1O60925 122 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 PEX14O75381 377 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 NDUFB6O95139 128 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 OR2H2O95918 312 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 CSN2P05814 226 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 FCER2P06734 321 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 H2AFB2P0C5Z0 115 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 EGR1P18146 543 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 NAT1P18440 290 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 CD80P33681 288 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 BCAP31P51572 246 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 CCR6P51684 374 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 RAG2P55895 527 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 TMEM50BP56557 158 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 TAS2R31P59538 309 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 ERVK11-1P61568 191 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 HERV-K104P61576 105 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 BTG1P62324 171 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 HLA-DRB3P79483 266 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 MAB21L1Q13394 359 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 ATXN7L3Q14CW9 347 aaPredicted RBP5.03□□□□□ -1.6
HMGB3-202ENST00000419110 ZNF146Q15072 292 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 CDK10Q15131 360 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 MPPED2Q15777 294 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 TATDN3Q17R31 274 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 MICBQ29980 383 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 SCGB2B2Q4G0G5 96 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 PLA1AQ53H76 456 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 VAX1Q5SQQ9 334 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 AGAP6Q5VW22 663 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 SIGIRRQ6IA17 410 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 OR52W1Q6IF63 320 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 TRAT1Q6PIZ9 186 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 MEX3BQ6ZN04 569 aaKnown RBP5.03□□□□□ -1.6
HMGB3-202ENST00000419110 IDO2Q6ZQW0 420 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 ZNF826PQ6ZT77 177 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 BTN2A1Q7KYR7 527 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 HOGA1Q86XE5 327 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 Q8N3U1 123 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 BPIFB2Q8N4F0 458 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 GVQW1Q8N7I0 195 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 BOLLQ8N9W6 283 aaKnown RBP5.03□□□□□ -1.6
HMGB3-202ENST00000419110 SUMF2Q8NBJ7 301 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 DUSP18Q8NEJ0 188 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 OR4S1Q8NGB4 309 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 OR51S1Q8NGJ8 323 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 CCDC107Q8WV48 283 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 GIMAP1Q8WWP7 306 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 DYRK2Q92630 601 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 RDH5Q92781 318 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 BBC3Q96PG8 261 aaPredicted RBP5.03□□□□□ -1.6
HMGB3-202ENST00000419110 HDHD3Q9BSH5 251 aaPredicted RBP5.03□□□□□ -1.6
HMGB3-202ENST00000419110 TMEM204Q9BSN7 226 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 TINAGL1Q9GZM7 467 aaPredicted RBP5.03□□□□□ -1.6
HMGB3-202ENST00000419110 MMP28Q9H239 520 aa5.03□□□□□ -1.6
HMGB3-202ENST00000419110 MS4A5Q9H3V2 200 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms