RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 RHOFQ9HBH0 211 aa11.53□□□□□ -0.56
PAF1-202ENST00000416728 ZNF286AQ9HBT8 521 aa11.53□□□□□ -0.56
PAF1-202ENST00000416728 SAC3D1A6NKF1 404 aa11.52□□□□□ -0.57
PAF1-202ENST00000416728 BUB1B-PAK6H3BSN5 160 aa11.52□□□□□ -0.57
PAF1-202ENST00000416728 DYNC1I1O14576 645 aa11.52□□□□□ -0.57
PAF1-202ENST00000416728 MPIG6BO95866 241 aa11.52□□□□□ -0.57
PAF1-202ENST00000416728 MT-ND2P03891 347 aa11.52□□□□□ -0.57
PAF1-202ENST00000416728 CSN2P05814 226 aa11.52□□□□□ -0.57
PAF1-202ENST00000416728 HTR1AP08908 422 aa11.52□□□□□ -0.57
PAF1-202ENST00000416728 GDNFP39905 211 aa11.52□□□□□ -0.57
PAF1-202ENST00000416728 MNDAP41218 407 aa11.52□□□□□ -0.57
PAF1-202ENST00000416728 CCR9P51686 369 aa11.52□□□□□ -0.57
PAF1-202ENST00000416728 SLC35A2P78381 396 aa11.52□□□□□ -0.57
PAF1-202ENST00000416728 HLA-DRB5Q30154 266 aa11.52□□□□□ -0.57
PAF1-202ENST00000416728 KHDC1LQ5JSQ8 128 aa11.52□□□□□ -0.57
PAF1-202ENST00000416728 KRBOX4Q5JUW0 171 aa11.52□□□□□ -0.57
PAF1-202ENST00000416728 TPTE2P1Q5T6R2 138 aa11.52□□□□□ -0.57
PAF1-202ENST00000416728 CCDC144NLQ6NUI1 221 aa11.52□□□□□ -0.57
PAF1-202ENST00000416728 CHST4Q8NCG5 386 aa11.52□□□□□ -0.57
PAF1-202ENST00000416728 OR51A4Q8NGJ6 313 aa11.52□□□□□ -0.57
PAF1-202ENST00000416728 OR10AC1Q8NH08 325 aa11.52□□□□□ -0.57
PAF1-202ENST00000416728 TRUB1Q8WWH5 349 aaKnown RBP11.52□□□□□ -0.57
PAF1-202ENST00000416728 MYDGFQ969H8 173 aa11.52□□□□□ -0.57
PAF1-202ENST00000416728 RNFT2Q96EX2 444 aa11.52□□□□□ -0.57
PAF1-202ENST00000416728 RBM14Q96PK6 669 aaKnown RBP11.52□□□□□ -0.57
PAF1-202ENST00000416728 ING3Q9NXR8 418 aa11.52□□□□□ -0.57
PAF1-202ENST00000416728 DSCAML1Q8TD84 2053 aa11.51□□□□□ -0.57
PAF1-202ENST00000416728 M0QZK8 103 aa11.51□□□□□ -0.57
PAF1-202ENST00000416728 CLIC3O95833 236 aa11.51□□□□□ -0.57
PAF1-202ENST00000416728 OR3A4PP47883 348 aa11.51□□□□□ -0.57
PAF1-202ENST00000416728 PRRX1P54821 245 aa11.51□□□□□ -0.57
PAF1-202ENST00000416728 RBM39Q14498 530 aaKnown RBP11.51□□□□□ -0.57
PAF1-202ENST00000416728 ATXN7L3Q14CW9 347 aaPredicted RBP11.51□□□□□ -0.57
PAF1-202ENST00000416728 SAXO1Q8IYX7 474 aa11.51□□□□□ -0.57
PAF1-202ENST00000416728 COQ2Q96H96 371 aa11.51□□□□□ -0.57
PAF1-202ENST00000416728 OR6C3Q9NZP0 311 aa11.51□□□□□ -0.57
PAF1-202ENST00000416728 A0A087X0M5 115 aa11.5□□□□□ -0.57
PAF1-202ENST00000416728 A0A1B0GX30 115 aa11.5□□□□□ -0.57
PAF1-202ENST00000416728 SH2D7A6NKC9 451 aaPredicted RBP11.5□□□□□ -0.57
PAF1-202ENST00000416728 ZNF729A6NN14 1252 aaPredicted RBP11.5□□□□□ -0.57
PAF1-202ENST00000416728 OOSP1A8MZH6 123 aa11.5□□□□□ -0.57
PAF1-202ENST00000416728 J3QLW9 94 aa11.5□□□□□ -0.57
PAF1-202ENST00000416728 J3QRE1 110 aa11.5□□□□□ -0.57
PAF1-202ENST00000416728 SLC33A1O00400 549 aaPredicted RBP11.5□□□□□ -0.57
PAF1-202ENST00000416728 DEGS1O15121 323 aa11.5□□□□□ -0.57
PAF1-202ENST00000416728 AMY1AP04745 511 aa11.5□□□□□ -0.57
PAF1-202ENST00000416728 AMY2AP04746 511 aa11.5□□□□□ -0.57
PAF1-202ENST00000416728 ZNF19P17023 458 aa11.5□□□□□ -0.57
PAF1-202ENST00000416728 C9orf152Q5JTZ5 239 aa11.5□□□□□ -0.57
PAF1-202ENST00000416728 MEDAGQ5VYS4 303 aa11.5□□□□□ -0.57
PAF1-202ENST00000416728 Q6P435 159 aa11.5□□□□□ -0.57
PAF1-202ENST00000416728 C10orf99Q6UWK7 81 aa11.5□□□□□ -0.57
PAF1-202ENST00000416728 RNF144BQ7Z419 303 aa11.5□□□□□ -0.57
PAF1-202ENST00000416728 ACBD7Q8N6N7 88 aa11.5□□□□□ -0.57
PAF1-202ENST00000416728 PELI1Q96FA3 418 aa11.5□□□□□ -0.57
PAF1-202ENST00000416728 RCC1LQ96I51 464 aaKnown RBP11.5□□□□□ -0.57
PAF1-202ENST00000416728 HRASLS5Q96KN8 279 aa11.5□□□□□ -0.57
PAF1-202ENST00000416728 ZCCHC4Q9H5U6 513 aa11.5□□□□□ -0.57
PAF1-202ENST00000416728 ORC6Q9Y5N6 252 aa11.5□□□□□ -0.57
PAF1-202ENST00000416728 OR4C45A6NMZ5 311 aa11.49□□□□□ -0.57
PAF1-202ENST00000416728 LY6LH3BQJ8 138 aa11.49□□□□□ -0.57
PAF1-202ENST00000416728 DUS4LO95620 317 aaKnown RBP11.49□□□□□ -0.57
PAF1-202ENST00000416728 HCKP08631 526 aa11.49□□□□□ -0.57
PAF1-202ENST00000416728 FAM106CPP0CH98 169 aa11.49□□□□□ -0.57
PAF1-202ENST00000416728 TMEM225BP0DP42 221 aa11.49□□□□□ -0.57
PAF1-202ENST00000416728 DBTP11182 482 aaKnown RBP11.49□□□□□ -0.57
PAF1-202ENST00000416728 NFYBP25208 207 aa11.49□□□□□ -0.57
PAF1-202ENST00000416728 ALKBH1Q13686 389 aaKnown RBP11.49□□□□□ -0.57
PAF1-202ENST00000416728 C17orf58Q2M2W7 97 aa11.49□□□□□ -0.57
PAF1-202ENST00000416728 SLC25A30Q5SVS4 291 aa11.49□□□□□ -0.57
PAF1-202ENST00000416728 OR9G1Q8NH87 305 aa11.49□□□□□ -0.57
PAF1-202ENST00000416728 TOMM40LQ969M1 308 aa11.49□□□□□ -0.57
PAF1-202ENST00000416728 RPEQ96AT9 228 aa11.49□□□□□ -0.57
PAF1-202ENST00000416728 MRPL48Q96GC5 212 aaKnown RBP11.49□□□□□ -0.57
PAF1-202ENST00000416728 C4orf36Q96KX1 117 aa11.49□□□□□ -0.57
PAF1-202ENST00000416728 PPIL3Q9H2H8 161 aaKnown RBP11.49□□□□□ -0.57
PAF1-202ENST00000416728 PCDHB16Q9NRJ7 776 aa11.49□□□□□ -0.57
PAF1-202ENST00000416728 MYRFQ9Y2G1 1151 aa11.49□□□□□ -0.57
PAF1-202ENST00000416728 MOB4Q9Y3A3 225 aa11.49□□□□□ -0.57
PAF1-202ENST00000416728 HSPE1-MOB4S4R3N1 261 aa11.49□□□□□ -0.57
PAF1-202ENST00000416728 KBTBD11-OT1A0A1B0GTJ5 212 aa11.48□□□□□ -0.57
PAF1-202ENST00000416728 SNTNA6NMZ2 147 aa11.48□□□□□ -0.57
PAF1-202ENST00000416728 HSPB6O14558 160 aa11.48□□□□□ -0.57
PAF1-202ENST00000416728 ATP5HO75947 161 aa11.48□□□□□ -0.57
PAF1-202ENST00000416728 GLP1RP43220 463 aa11.48□□□□□ -0.57
PAF1-202ENST00000416728 SNRPGP62308 76 aaKnown RBP11.48□□□□□ -0.57
PAF1-202ENST00000416728 CDK5R1Q15078 307 aa11.48□□□□□ -0.57
PAF1-202ENST00000416728 KISS1Q15726 138 aa11.48□□□□□ -0.57
PAF1-202ENST00000416728 OSR2Q8N2R0 312 aa11.48□□□□□ -0.57
PAF1-202ENST00000416728 ZNF565Q8N9K5 539 aa11.48□□□□□ -0.57
PAF1-202ENST00000416728 OR5D14Q8NGL3 314 aa11.48□□□□□ -0.57
PAF1-202ENST00000416728 KIRREL1Q96J84 757 aa11.48□□□□□ -0.57
PAF1-202ENST00000416728 MYCBPQ99417 103 aaPredicted RBP11.48□□□□□ -0.57
PAF1-202ENST00000416728 INPP5EQ9NRR6 644 aa11.48□□□□□ -0.57
PAF1-202ENST00000416728 AMMECR1Q9Y4X0 333 aaPredicted RBP11.48□□□□□ -0.57
PAF1-202ENST00000416728 MEIKINA0A087WXM9 373 aa11.47□□□□□ -0.57
PAF1-202ENST00000416728 PSMB11A5LHX3 300 aa11.47□□□□□ -0.57
PAF1-202ENST00000416728 H0YJX3 145 aa11.47□□□□□ -0.57
PAF1-202ENST00000416728 K7EIL1 84 aa11.47□□□□□ -0.57
PAF1-202ENST00000416728 SULT1B1O43704 296 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms