RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 DEGS1O15121 323 aa14.14□□□□□ -0.15
PDLIM2-208ENST00000416159 PEX14O75381 377 aa14.14□□□□□ -0.15
PDLIM2-208ENST00000416159 FBXO24O75426 580 aa14.14□□□□□ -0.15
PDLIM2-208ENST00000416159 OPN1MWP04001 364 aa14.14□□□□□ -0.15
PDLIM2-208ENST00000416159 OPN1MW2P0DN77 364 aa14.14□□□□□ -0.15
PDLIM2-208ENST00000416159 OPN1MW3P0DN78 364 aa14.14□□□□□ -0.15
PDLIM2-208ENST00000416159 CDK2P24941 298 aa14.14□□□□□ -0.15
PDLIM2-208ENST00000416159 MTNR1BP49286 362 aa14.14□□□□□ -0.15
PDLIM2-208ENST00000416159 ZP1P60852 638 aa14.14□□□□□ -0.15
PDLIM2-208ENST00000416159 BDH1Q02338 343 aa14.14□□□□□ -0.15
PDLIM2-208ENST00000416159 EMX1Q04741 257 aaPredicted RBP14.14□□□□□ -0.15
PDLIM2-208ENST00000416159 HABP2Q14520 560 aaPredicted RBP14.14□□□□□ -0.15
PDLIM2-208ENST00000416159 KRBOX4Q5JUW0 171 aa14.14□□□□□ -0.15
PDLIM2-208ENST00000416159 PRAMEF5Q5TYX0 476 aa14.14□□□□□ -0.15
PDLIM2-208ENST00000416159 ZNF691Q5VV52 312 aa14.14□□□□□ -0.15
PDLIM2-208ENST00000416159 PQLC1Q8N2U9 271 aa14.14□□□□□ -0.15
PDLIM2-208ENST00000416159 TSEN15Q8WW01 171 aaKnown RBP14.14□□□□□ -0.15
PDLIM2-208ENST00000416159 CPNE2Q96FN4 548 aaPredicted RBP14.14□□□□□ -0.15
PDLIM2-208ENST00000416159 PDCD1LG2Q9BQ51 273 aa14.14□□□□□ -0.15
PDLIM2-208ENST00000416159 ODAMA1E959 279 aa14.13□□□□□ -0.15
PDLIM2-208ENST00000416159 SLC33A1O00400 549 aaPredicted RBP14.13□□□□□ -0.15
PDLIM2-208ENST00000416159 MAGEB3O15480 346 aa14.13□□□□□ -0.15
PDLIM2-208ENST00000416159 ALDOBP05062 364 aa14.13□□□□□ -0.15
PDLIM2-208ENST00000416159 JUNBP17275 347 aaPredicted RBP14.13□□□□□ -0.15
PDLIM2-208ENST00000416159 RAB3AP20336 220 aa14.13□□□□□ -0.15
PDLIM2-208ENST00000416159 CD34P28906 385 aa14.13□□□□□ -0.15
PDLIM2-208ENST00000416159 BRS3P32247 399 aa14.13□□□□□ -0.15
PDLIM2-208ENST00000416159 ARHGDIBP52566 201 aa14.13□□□□□ -0.15
PDLIM2-208ENST00000416159 ARSJQ5FYB0 599 aaPredicted RBP14.13□□□□□ -0.15
PDLIM2-208ENST00000416159 LPCAT4Q643R3 524 aa14.13□□□□□ -0.15
PDLIM2-208ENST00000416159 ELP2Q6IA86 826 aa14.13□□□□□ -0.15
PDLIM2-208ENST00000416159 C16orf82Q7Z2V1 217 aa14.13□□□□□ -0.15
PDLIM2-208ENST00000416159 C1QL4Q86Z23 238 aa14.13□□□□□ -0.15
PDLIM2-208ENST00000416159 PXT1Q8NFP0 134 aa14.13□□□□□ -0.15
PDLIM2-208ENST00000416159 OR4D6Q8NGJ1 314 aa14.13□□□□□ -0.15
PDLIM2-208ENST00000416159 CREB3L1Q96BA8 519 aa14.13□□□□□ -0.15
PDLIM2-208ENST00000416159 WNT10AQ9GZT5 417 aa14.13□□□□□ -0.15
PDLIM2-208ENST00000416159 PLXNB1O43157 2135 aa14.12□□□□□ -0.15
PDLIM2-208ENST00000416159 ZNF729A6NN14 1252 aaPredicted RBP14.12□□□□□ -0.15
PDLIM2-208ENST00000416159 LEUTXA8MZ59 168 aa14.12□□□□□ -0.15
PDLIM2-208ENST00000416159 PTGFRP43088 359 aa14.12□□□□□ -0.15
PDLIM2-208ENST00000416159 PRRX1P54821 245 aa14.12□□□□□ -0.15
PDLIM2-208ENST00000416159 BLCAPP62952 87 aa14.12□□□□□ -0.15
PDLIM2-208ENST00000416159 CDK5R1Q15078 307 aa14.12□□□□□ -0.15
PDLIM2-208ENST00000416159 HIST2H2BDQ6DRA6 164 aa14.12□□□□□ -0.15
PDLIM2-208ENST00000416159 ZNF555Q8NEP9 628 aa14.12□□□□□ -0.15
PDLIM2-208ENST00000416159 STMN2Q93045 179 aa14.12□□□□□ -0.15
PDLIM2-208ENST00000416159 COQ2Q96H96 371 aa14.12□□□□□ -0.15
PDLIM2-208ENST00000416159 JAM3Q9BX67 310 aa14.12□□□□□ -0.15
PDLIM2-208ENST00000416159 FGF20Q9NP95 211 aaPredicted RBP14.12□□□□□ -0.15
PDLIM2-208ENST00000416159 OR6C3Q9NZP0 311 aa14.12□□□□□ -0.15
PDLIM2-208ENST00000416159 EBAG9O00559 213 aa14.11□□□□□ -0.15
PDLIM2-208ENST00000416159 TOR1AO14656 332 aa14.11□□□□□ -0.15
PDLIM2-208ENST00000416159 IGLV1-47P01700 117 aa14.11□□□□□ -0.15
PDLIM2-208ENST00000416159 CD28P10747 220 aa14.11□□□□□ -0.15
PDLIM2-208ENST00000416159 GDNFP39905 211 aa14.11□□□□□ -0.15
PDLIM2-208ENST00000416159 CEACAM3P40198 252 aa14.11□□□□□ -0.15
PDLIM2-208ENST00000416159 VDAC2P45880 294 aaPredicted RBP14.11□□□□□ -0.15
PDLIM2-208ENST00000416159 NSUN5P1Q3KNT7 163 aa14.11□□□□□ -0.15
PDLIM2-208ENST00000416159 CCDC58Q4VC31 144 aa14.11□□□□□ -0.15
PDLIM2-208ENST00000416159 ZNF529Q6P280 563 aa14.11□□□□□ -0.15
PDLIM2-208ENST00000416159 RPL22L1Q6P5R6 122 aaKnown RBP14.11□□□□□ -0.15
PDLIM2-208ENST00000416159 BAIAP2L2Q6UXY1 529 aa14.11□□□□□ -0.15
PDLIM2-208ENST00000416159 SATL1Q86VE3 508 aa14.11□□□□□ -0.15
PDLIM2-208ENST00000416159 NDUFA11Q86Y39 141 aa14.11□□□□□ -0.15
PDLIM2-208ENST00000416159 WIPF2Q8TF74 440 aaPredicted RBP14.11□□□□□ -0.15
PDLIM2-208ENST00000416159 APH1BQ8WW43 257 aa14.11□□□□□ -0.15
PDLIM2-208ENST00000416159 AKR1E2Q96JD6 320 aa14.11□□□□□ -0.15
PDLIM2-208ENST00000416159 RDH12Q96NR8 316 aa14.11□□□□□ -0.15
PDLIM2-208ENST00000416159 GPER1Q99527 375 aa14.11□□□□□ -0.15
PDLIM2-208ENST00000416159 NCOR1P1Q9H4R4 102 aa14.11□□□□□ -0.15
PDLIM2-208ENST00000416159 ING3Q9NXR8 418 aa14.11□□□□□ -0.15
PDLIM2-208ENST00000416159 A0A087X0M5 115 aa14.1□□□□□ -0.15
PDLIM2-208ENST00000416159 A0A1B0GX30 115 aa14.1□□□□□ -0.15
PDLIM2-208ENST00000416159 H0YJX3 145 aa14.1□□□□□ -0.15
PDLIM2-208ENST00000416159 BAG2O95816 211 aa14.1□□□□□ -0.15
PDLIM2-208ENST00000416159 CD2P06729 351 aa14.1□□□□□ -0.15
PDLIM2-208ENST00000416159 LIMS3P0CW19 117 aa14.1□□□□□ -0.15
PDLIM2-208ENST00000416159 LIMS4P0CW20 117 aa14.1□□□□□ -0.15
PDLIM2-208ENST00000416159 DCKP27707 260 aa14.1□□□□□ -0.15
PDLIM2-208ENST00000416159 GTF2A1P52655 376 aaPredicted RBP14.1□□□□□ -0.15
PDLIM2-208ENST00000416159 IL13RA2Q14627 380 aa14.1□□□□□ -0.15
PDLIM2-208ENST00000416159 ATXN7L3Q14CW9 347 aaPredicted RBP14.1□□□□□ -0.15
PDLIM2-208ENST00000416159 C17orf58Q2M2W7 97 aa14.1□□□□□ -0.15
PDLIM2-208ENST00000416159 HLA-DRB5Q30154 266 aa14.1□□□□□ -0.15
PDLIM2-208ENST00000416159 Q6ZS46 218 aa14.1□□□□□ -0.15
PDLIM2-208ENST00000416159 ZNF565Q8N9K5 539 aa14.1□□□□□ -0.15
PDLIM2-208ENST00000416159 OR51T1Q8NGJ9 327 aa14.1□□□□□ -0.15
PDLIM2-208ENST00000416159 GPR148Q8TDV2 347 aa14.1□□□□□ -0.15
PDLIM2-208ENST00000416159 TNFAIP8L1Q8WVP5 186 aa14.1□□□□□ -0.15
PDLIM2-208ENST00000416159 CAPSLQ8WWF8 208 aa14.1□□□□□ -0.15
PDLIM2-208ENST00000416159 OR5M11Q96RB7 305 aa14.1□□□□□ -0.15
PDLIM2-208ENST00000416159 NR1H4Q96RI1 486 aaPredicted RBP14.1□□□□□ -0.15
PDLIM2-208ENST00000416159 OCSTAMPQ9BR26 566 aa14.1□□□□□ -0.15
PDLIM2-208ENST00000416159 BARHL1Q9BZE3 327 aa14.1□□□□□ -0.15
PDLIM2-208ENST00000416159 LIN7BQ9HAP6 207 aa14.1□□□□□ -0.15
PDLIM2-208ENST00000416159 ZNF286AQ9HBT8 521 aa14.1□□□□□ -0.15
PDLIM2-208ENST00000416159 SMPD3Q9NY59 655 aaPredicted RBP14.1□□□□□ -0.15
PDLIM2-208ENST00000416159 KBTBD11-OT1A0A1B0GTJ5 212 aa14.09□□□□□ -0.15
PDLIM2-208ENST00000416159 IRGMA1A4Y4 181 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms