RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 NDUFB8O95169 186 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 KLF8O95600 359 aaPredicted RBP3.04□□□□□ -1.92
SF3B1-203ENST00000414174 TBX6O95947 436 aaPredicted RBP3.04□□□□□ -1.92
SF3B1-203ENST00000414174 TTRP02766 147 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 OR5G3P0C626 314 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 HKR1P10072 659 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 RPL7P18124 248 aaKnown RBP3.04□□□□□ -1.92
SF3B1-203ENST00000414174 PRTN3P24158 256 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 CD38P28907 300 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 CTGFP29279 349 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 IL2RGP31785 369 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 GABRA3P34903 492 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 G6PCP35575 357 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 OR1D4P47884 311 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 CXCL12P48061 93 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 PTH2RP49190 550 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 EMP1P54849 157 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 RAB38P57729 211 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 KRTAP10-6P60371 365 aaPredicted RBP3.04□□□□□ -1.92
SF3B1-203ENST00000414174 GNG11P61952 73 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 TIMM10P62072 90 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 RPS4XP62701 263 aaKnown RBP3.04□□□□□ -1.92
SF3B1-203ENST00000414174 SLC35A2P78381 396 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 HOXC5Q00444 222 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 GGTLC2Q14390 218 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 IHHQ14623 411 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 PAFAH1B3Q15102 231 aaKnown RBP3.04□□□□□ -1.92
SF3B1-203ENST00000414174 SIX1Q15475 284 aaPredicted RBP3.04□□□□□ -1.92
SF3B1-203ENST00000414174 FAM27D1Q5T7N8 215 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 GGNBP1Q5YKI7 109 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 OR10K2Q6IF99 312 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 SLC18B1Q6NT16 456 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 FBXL22Q6P050 247 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 TMUB2Q71RG4 321 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 NEGR1Q7Z3B1 354 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 COX8CQ7Z4L0 72 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 AMIGO2Q86SJ2 522 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 MMGT1Q8N4V1 131 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 KRTCAP2Q8N6L1 136 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 FER1L6-AS1Q8NA97 138 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 SUMF1Q8NBK3 374 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 PLPP5Q8NEB5 264 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 OR51A2Q8NGJ7 313 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 OR8D4Q8NGM9 314 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 OR10G7Q8NGN6 311 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 OR2G3Q8NGZ4 309 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 ZNF519Q8TB69 540 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 SLC37A2Q8TED4 501 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 SECTM1Q8WVN6 248 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 RASL10AQ92737 203 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 TSACCQ96A04 125 aaPredicted RBP3.04□□□□□ -1.92
SF3B1-203ENST00000414174 ZMYND19Q96E35 227 aaPredicted RBP3.04□□□□□ -1.92
SF3B1-203ENST00000414174 MRPS24Q96EL2 167 aaKnown RBP3.04□□□□□ -1.92
SF3B1-203ENST00000414174 DCUN1D1Q96GG9 259 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 LINC00477Q96M19 166 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 TSPAN32Q96QS1 320 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 OR4K3Q96R72 315 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 TRIB3Q96RU7 358 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 S100A13Q99584 98 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 DCTN5Q9BTE1 182 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 PBDC1Q9BVG4 233 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 C1QTNF4Q9BXJ3 329 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 SAMD10Q9BYL1 202 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 SMIM3Q9BZL3 60 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 NPFFR1Q9GZQ6 430 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 FBXL15Q9H469 300 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 CXorf21Q9HAI6 301 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 PELI2Q9HAT8 420 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 NOX3Q9HBY0 568 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 GALNT9Q9HCQ5 603 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 ACER3Q9NUN7 267 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 TAS2R5Q9NYW4 299 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 COMMD9Q9P000 198 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 ZNF319Q9P2F9 582 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 COMMD3Q9UBI1 195 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 PCYOX1Q9UHG3 505 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 BTRCQ9Y297 605 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 POLR1DQ9Y2S0 133 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 HDGFL3Q9Y3E1 203 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 WIPI2Q9Y4P8 454 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 COL4A3Q01955 1670 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 MAGI2Q86UL8 1455 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 ABCC5O15440 1437 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 LOC100130705A0A1B0GUX0 176 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 IQCMA0A1B0GVH7 501 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 GAGE12HA6NDE8 117 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 OR5B21A6NL26 309 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 ZNF724A8MTY0 619 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 ZNF732B4DXR9 585 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 E7ENX8 843 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 M0R1B8 84 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 SAP18O00422 153 aaKnown RBP3.03□□□□□ -1.92
SF3B1-203ENST00000414174 NME4O00746 187 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 HSD17B6O14756 317 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 TMPRSS11DO60235 418 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 DHRS3O75911 302 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 NCR1O76036 304 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 ZNF432O94892 652 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 CLDN14O95500 239 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 SEMA4FO95754 770 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms