RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 MPV17LQ2QL34 196 aa25.29■■□□□ 1.64
CSNK1E-206ENST00000413574 ATAD3CQ5T2N8 411 aa25.29■■□□□ 1.64
CSNK1E-206ENST00000413574 CD276Q5ZPR3 534 aa25.29■■□□□ 1.64
CSNK1E-206ENST00000413574 CHST4Q8NCG5 386 aa25.29■■□□□ 1.64
CSNK1E-206ENST00000413574 RAB40AQ8WXH6 277 aa25.29■■□□□ 1.64
CSNK1E-206ENST00000413574 DCTN5Q9BTE1 182 aa25.29■■□□□ 1.64
CSNK1E-206ENST00000413574 IGHV2-70DA0A0C4DH43 119 aa25.28■■□□□ 1.64
CSNK1E-206ENST00000413574 SNRPBP14678 240 aaKnown RBP25.28■■□□□ 1.64
CSNK1E-206ENST00000413574 EFNB2P52799 333 aa25.28■■□□□ 1.64
CSNK1E-206ENST00000413574 LINC00596Q86U02 117 aa25.28■■□□□ 1.64
CSNK1E-206ENST00000413574 TPRX1Q8N7U7 411 aa25.28■■□□□ 1.64
CSNK1E-206ENST00000413574 SUMF2Q8NBJ7 301 aa25.28■■□□□ 1.64
CSNK1E-206ENST00000413574 NUDT16L1Q9BRJ7 211 aaKnown RBP25.28■■□□□ 1.64
CSNK1E-206ENST00000413574 LPAR5Q9H1C0 372 aa25.28■■□□□ 1.64
CSNK1E-206ENST00000413574 C19orf12Q9NSK7 152 aa25.28■■□□□ 1.64
CSNK1E-206ENST00000413574 ING3Q9NXR8 418 aa25.28■■□□□ 1.64
CSNK1E-206ENST00000413574 A0A0A6YYD4 124 aa25.27■■□□□ 1.64
CSNK1E-206ENST00000413574 MEX3AA1L020 520 aaKnown RBP25.27■■□□□ 1.64
CSNK1E-206ENST00000413574 GPR37O15354 613 aa25.27■■□□□ 1.64
CSNK1E-206ENST00000413574 PAHP00439 452 aa25.27■■□□□ 1.64
CSNK1E-206ENST00000413574 PAN3Q58A45 887 aaKnown RBP25.27■■□□□ 1.64
CSNK1E-206ENST00000413574 DCAF12L2Q5VW00 463 aa25.27■■□□□ 1.64
CSNK1E-206ENST00000413574 SIGIRRQ6IA17 410 aa25.27■■□□□ 1.64
CSNK1E-206ENST00000413574 FAHD2BQ6P2I3 314 aaPredicted RBP25.27■■□□□ 1.64
CSNK1E-206ENST00000413574 GDPD3Q7L5L3 318 aa25.27■■□□□ 1.64
CSNK1E-206ENST00000413574 FAHD2AQ96GK7 314 aa25.27■■□□□ 1.64
CSNK1E-206ENST00000413574 IFT22Q9H7X7 185 aa25.27■■□□□ 1.64
CSNK1E-206ENST00000413574 CEPT1Q9Y6K0 416 aa25.27■■□□□ 1.64
CSNK1E-206ENST00000413574 ECDO95905 644 aaPredicted RBP25.26■■□□□ 1.63
CSNK1E-206ENST00000413574 TMBIM6P55061 237 aa25.26■■□□□ 1.63
CSNK1E-206ENST00000413574 EDDM3BP56851 147 aa25.26■■□□□ 1.63
CSNK1E-206ENST00000413574 ATXN7L3Q14CW9 347 aaPredicted RBP25.26■■□□□ 1.63
CSNK1E-206ENST00000413574 OR5D13Q8NGL4 314 aa25.26■■□□□ 1.63
CSNK1E-206ENST00000413574 RAB2BQ8WUD1 216 aa25.26■■□□□ 1.63
CSNK1E-206ENST00000413574 BARHL1Q9BZE3 327 aa25.26■■□□□ 1.63
CSNK1E-206ENST00000413574 DCSTAMPQ9H295 470 aa25.26■■□□□ 1.63
CSNK1E-206ENST00000413574 INSIG2Q9Y5U4 225 aa25.26■■□□□ 1.63
CSNK1E-206ENST00000413574 SPCS2Q15005 226 aa25.26■■□□□ 1.63
CSNK1E-206ENST00000413574 SLC25A46Q96AG3 418 aa25.26■■□□□ 1.63
CSNK1E-206ENST00000413574 DPCDQ9BVM2 203 aaPredicted RBP25.26■■□□□ 1.63
CSNK1E-206ENST00000413574 TM2D1Q9BX74 207 aa25.26■■□□□ 1.63
CSNK1E-206ENST00000413574 FBLN5Q9UBX5 448 aa25.26■■□□□ 1.63
CSNK1E-206ENST00000413574 KCNS2Q9ULS6 477 aa25.26■■□□□ 1.63
CSNK1E-206ENST00000413574 PPIAL4CA0A0B4J2A2 164 aa25.25■■□□□ 1.63
CSNK1E-206ENST00000413574 A0A0G2JMP0 313 aa25.25■■□□□ 1.63
CSNK1E-206ENST00000413574 A0A0X1KG70 313 aa25.25■■□□□ 1.63
CSNK1E-206ENST00000413574 KIR2DS1A0A191URI9 304 aa25.25■■□□□ 1.63
CSNK1E-206ENST00000413574 AESQ08117 197 aa25.25■■□□□ 1.63
CSNK1E-206ENST00000413574 RTN4RL2Q86UN3 420 aa25.25■■□□□ 1.63
CSNK1E-206ENST00000413574 OR4M2Q8NGB6 313 aa25.25■■□□□ 1.63
CSNK1E-206ENST00000413574 PPP1R35Q8TAP8 253 aa25.25■■□□□ 1.63
CSNK1E-206ENST00000413574 LGALS14Q8TCE9 139 aa25.25■■□□□ 1.63
CSNK1E-206ENST00000413574 SONP18583 2426 aaKnown RBP25.24■■□□□ 1.63
CSNK1E-206ENST00000413574 MGST3O14880 152 aa25.24■■□□□ 1.63
CSNK1E-206ENST00000413574 ENSAO43768 121 aaKnown RBP25.24■■□□□ 1.63
CSNK1E-206ENST00000413574 USP43Q70EL4 1123 aa25.24■■□□□ 1.63
CSNK1E-206ENST00000413574 FAM185AQ8N0U4 392 aa25.24■■□□□ 1.63
CSNK1E-206ENST00000413574 LY6G5BQ8NDX9 201 aa25.24■■□□□ 1.63
CSNK1E-206ENST00000413574 ISOC1Q96CN7 298 aa25.24■■□□□ 1.63
CSNK1E-206ENST00000413574 RCC2Q9P258 522 aaKnown RBP25.24■■□□□ 1.63
CSNK1E-206ENST00000413574 RAB22AQ9UL26 194 aa25.24■■□□□ 1.63
CSNK1E-206ENST00000413574 A8MV72 311 aaPredicted RBP25.23■■□□□ 1.63
CSNK1E-206ENST00000413574 PPIAL4GP0DN37 164 aa25.23■■□□□ 1.63
CSNK1E-206ENST00000413574 RPL31P62899 125 aaKnown RBP25.23■■□□□ 1.63
CSNK1E-206ENST00000413574 BLMHQ13867 455 aa25.23■■□□□ 1.63
CSNK1E-206ENST00000413574 RAB12Q6IQ22 244 aa25.23■■□□□ 1.63
CSNK1E-206ENST00000413574 OR5H6Q8NGV6 325 aa25.23■■□□□ 1.63
CSNK1E-206ENST00000413574 COQ2Q96H96 371 aa25.23■■□□□ 1.63
CSNK1E-206ENST00000413574 URM1Q9BTM9 101 aaKnown RBP25.23■■□□□ 1.63
CSNK1E-206ENST00000413574 PEX16Q9Y5Y5 336 aa25.23■■□□□ 1.63
CSNK1E-206ENST00000413574 KIAA2026Q5HYC2 2103 aa25.23■■□□□ 1.63
CSNK1E-206ENST00000413574 FAM90A10PA6NDY2 464 aa25.23■■□□□ 1.63
CSNK1E-206ENST00000413574 FAM90A18PA6NE21 464 aa25.23■■□□□ 1.63
CSNK1E-206ENST00000413574 FAM90A16PA6NEW6 464 aa25.23■■□□□ 1.63
CSNK1E-206ENST00000413574 FAM90A20PA6NIJ5 464 aa25.23■■□□□ 1.63
CSNK1E-206ENST00000413574 FAM90A8PA6NJQ4 464 aa25.23■■□□□ 1.63
CSNK1E-206ENST00000413574 FAM90A7PA6NKC0 464 aa25.23■■□□□ 1.63
CSNK1E-206ENST00000413574 FAM90A22PA8MWA6 464 aa25.23■■□□□ 1.63
CSNK1E-206ENST00000413574 FAM90A12PA8MX19 464 aa25.23■■□□□ 1.63
CSNK1E-206ENST00000413574 FAM90A5PA8MXJ8 464 aa25.23■■□□□ 1.63
CSNK1E-206ENST00000413574 FAM90A23PA8MXZ1 464 aa25.23■■□□□ 1.63
CSNK1E-206ENST00000413574 SOCS1O15524 211 aa25.23■■□□□ 1.63
CSNK1E-206ENST00000413574 FAM90A15PP0C7V4 464 aa25.23■■□□□ 1.63
CSNK1E-206ENST00000413574 FAM90A13PP0C7W8 464 aa25.23■■□□□ 1.63
CSNK1E-206ENST00000413574 FAM90A14PP0C7W9 464 aa25.23■■□□□ 1.63
CSNK1E-206ENST00000413574 FAM90A24PP0C7X0 464 aa25.23■■□□□ 1.63
CSNK1E-206ENST00000413574 RANBP1P43487 201 aa25.23■■□□□ 1.63
CSNK1E-206ENST00000413574 C11orf91Q3C1V1 193 aa25.23■■□□□ 1.63
CSNK1E-206ENST00000413574 NKAPLQ5M9Q1 402 aa25.23■■□□□ 1.63
CSNK1E-206ENST00000413574 BTNL3Q6UXE8 466 aa25.23■■□□□ 1.63
CSNK1E-206ENST00000413574 C8orf46Q8TAG6 207 aa25.23■■□□□ 1.63
CSNK1E-206ENST00000413574 PLPPR1Q8TBJ4 325 aa25.23■■□□□ 1.63
CSNK1E-206ENST00000413574 TMPRSS13Q9BYE2 586 aa25.23■■□□□ 1.63
CSNK1E-206ENST00000413574 A0A1W2PQ09 198 aa25.22■■□□□ 1.63
CSNK1E-206ENST00000413574 H3BMQ9 156 aa25.22■■□□□ 1.63
CSNK1E-206ENST00000413574 AVPP01185 164 aa25.22■■□□□ 1.63
CSNK1E-206ENST00000413574 GLIPR1P48060 266 aa25.22■■□□□ 1.63
CSNK1E-206ENST00000413574 VEGFCP49767 419 aa25.22■■□□□ 1.63
CSNK1E-206ENST00000413574 TMEM200BQ69YZ2 307 aa25.22■■□□□ 1.63
CSNK1E-206ENST00000413574 FAM89BQ8N5H3 189 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms