RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 FAM221AA4D161 298 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 LRRC30A6NM36 301 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 OR2AT4A6NND4 320 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 MCRIP1C9JLW8 97 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 IFNL4K9M1U5 179 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 M0QYG6 137 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 SH2D1BO14796 132 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 PSPNO60542 156 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 RAB3DO95716 219 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 NAPSAO96009 420 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 CYB5R3P00387 301 aaPredicted RBP5.58□□□□□ -1.52
VPS41-204ENST00000413141 TFF1P04155 84 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 SOD3P08294 240 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 DANCRP0C864 163 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 IRF2P14316 349 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 AMY2BP19961 511 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 LMO1P25800 156 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 GIFP27352 417 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 HRH1P35367 487 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 MDH2P40926 338 aaKnown RBP5.58□□□□□ -1.52
VPS41-204ENST00000413141 CCR6P51684 374 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 TAS2R46P59540 309 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 RBM39Q14498 530 aaKnown RBP5.58□□□□□ -1.52
VPS41-204ENST00000413141 MEF2DQ14814 521 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 ATXN7L3Q14CW9 347 aaPredicted RBP5.58□□□□□ -1.52
VPS41-204ENST00000413141 MICBQ29980 383 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 ACTBL2Q562R1 376 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 PAN3Q58A45 887 aaKnown RBP5.58□□□□□ -1.52
VPS41-204ENST00000413141 RNASE10Q5GAN6 216 aaKnown RBP5.58□□□□□ -1.52
VPS41-204ENST00000413141 AGAP6Q5VW22 663 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 TEX36Q5VZQ5 186 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 STUMQ69YW2 141 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 SFRP4Q6FHJ7 346 aaPredicted RBP5.58□□□□□ -1.52
VPS41-204ENST00000413141 PLET1Q6UQ28 207 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 DTX2Q86UW9 622 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 TGIF2LYQ8IUE0 185 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 BPIFB2Q8N4F0 458 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 BOLLQ8N9W6 283 aaKnown RBP5.58□□□□□ -1.52
VPS41-204ENST00000413141 DUSP18Q8NEJ0 188 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 BEST4Q8NFU0 473 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 OR56B4Q8NH76 319 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 NEK7Q8TDX7 302 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 RDH5Q92781 318 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 SPOCK3Q9BQ16 436 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 TRAF4Q9BUZ4 470 aaPredicted RBP5.58□□□□□ -1.52
VPS41-204ENST00000413141 ST6GALNAC5Q9BVH7 336 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 TINAGL1Q9GZM7 467 aaPredicted RBP5.58□□□□□ -1.52
VPS41-204ENST00000413141 MMP28Q9H239 520 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 PPA2Q9H2U2 334 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 DPAGT1Q9H3H5 408 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 SEBOXQ9HB31 216 aaPredicted RBP5.58□□□□□ -1.52
VPS41-204ENST00000413141 CHMP1AQ9HD42 196 aaPredicted RBP5.58□□□□□ -1.52
VPS41-204ENST00000413141 TMEM106BQ9NUM4 274 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 MCUBQ9NWR8 336 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 DCAF16Q9NXF7 216 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 ETAA1Q9NY74 926 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 TREM2Q9NZC2 230 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 COPZ2Q9P299 210 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 GLS2Q9UI32 602 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 ZNF222Q9UK12 451 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 FBXO9Q9UK97 447 aaPredicted RBP5.58□□□□□ -1.52
VPS41-204ENST00000413141 EDARQ9UNE0 448 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 WIPI2Q9Y4P8 454 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 FAM208BQ5VWN6 2430 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 IGHV3OR15-7A0A075B7D8 119 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 IGKV1D-8A0A087WSZ0 117 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 TRBV6-6A0A0A6YYG2 114 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 IGHV1-69-2A0A0G2JMI3 117 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 TMEM82A0PJX8 343 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 CLEC18AA5D8T8 446 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 OOEPA6NGQ2 149 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 RFPL4AA6NLU0 287 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 RFPL4AL1F8VTS6 287 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 TMEM178BH3BS89 294 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 ZNF737O75373 536 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 NDUFB6O95139 128 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 CD8AP01732 235 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 PMP2P02689 132 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 HPXP02790 462 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 TCRBP04435 133 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 AMY2AP04746 511 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 CSN2P05814 226 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 ZNF735P0CB33 412 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 PSG2P11465 335 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 PLA2G2AP14555 144 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 OR3A1P47881 315 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 ARPC4P59998 168 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 COL10A1Q03692 680 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 ZMYND11Q15326 602 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 VAX1Q5SQQ9 334 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 FAM201AQ5SY85 155 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 CLEC18BQ6UXF7 455 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 ZNF782Q6ZMW2 699 aaPredicted RBP5.57□□□□□ -1.52
VPS41-204ENST00000413141 ZNF497Q6ZNH5 498 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 C17orf107Q6ZR85 190 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 Q6ZS49 121 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 MOB1BQ7L9L4 216 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 C1orf87Q8N0U7 546 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 GAPTQ8N292 157 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 CD177Q8N6Q3 437 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms