RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 MARVELD1Q9BSK0 173 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 KRTAP3-3Q9BYR6 98 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 KRTAP3-2Q9BYR7 98 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 CHST6Q9GZX3 395 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 PPA2Q9H2U2 334 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 SPACA1Q9HBV2 294 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 DCAF16Q9NXF7 216 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 ETAA1Q9NY74 926 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 COPZ2Q9P299 210 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 ZNF107Q9UII5 783 aaPredicted RBP10.49□□□□□ -0.73
CHMP3-204ENST00000409727 PPP1R3CQ9UQK1 317 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 NUBP2Q9Y5Y2 271 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 B9A039 149 aa10.48□□□□□ -0.73
CHMP3-204ENST00000409727 DISC1C4P0D8 188 aa10.48□□□□□ -0.73
CHMP3-204ENST00000409727 ARPC1BO15143 372 aaKnown RBP10.48□□□□□ -0.73
CHMP3-204ENST00000409727 IFNA6P05013 189 aa10.48□□□□□ -0.73
CHMP3-204ENST00000409727 H2AFB2P0C5Z0 115 aa10.48□□□□□ -0.73
CHMP3-204ENST00000409727 CD80P33681 288 aa10.48□□□□□ -0.73
CHMP3-204ENST00000409727 OR3A3P47888 321 aa10.48□□□□□ -0.73
CHMP3-204ENST00000409727 ARPC4P59998 168 aa10.48□□□□□ -0.73
CHMP3-204ENST00000409727 MEF2DQ14814 521 aa10.48□□□□□ -0.73
CHMP3-204ENST00000409727 ATXN7L3Q14CW9 347 aaPredicted RBP10.48□□□□□ -0.73
CHMP3-204ENST00000409727 Q6ZPA2 131 aa10.48□□□□□ -0.73
CHMP3-204ENST00000409727 BTN2A1Q7KYR7 527 aa10.48□□□□□ -0.73
CHMP3-204ENST00000409727 TMEM204Q9BSN7 226 aa10.48□□□□□ -0.73
CHMP3-204ENST00000409727 SAP30LQ9HAJ7 183 aa10.48□□□□□ -0.73
CHMP3-204ENST00000409727 GLS2Q9UI32 602 aa10.48□□□□□ -0.73
CHMP3-204ENST00000409727 ANAPC10Q9UM13 185 aa10.48□□□□□ -0.73
CHMP3-204ENST00000409727 PKDREJQ9NTG1 2253 aa10.48□□□□□ -0.73
CHMP3-204ENST00000409727 SRRM5B3KS81 715 aa10.47□□□□□ -0.73
CHMP3-204ENST00000409727 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.47□□□□□ -0.73
CHMP3-204ENST00000409727 NDUFB6O95139 128 aa10.47□□□□□ -0.73
CHMP3-204ENST00000409727 ZNF735P0CB33 412 aa10.47□□□□□ -0.73
CHMP3-204ENST00000409727 NAT1P18440 290 aa10.47□□□□□ -0.73
CHMP3-204ENST00000409727 TNFRSF1AP19438 455 aa10.47□□□□□ -0.73
CHMP3-204ENST00000409727 GATA4P43694 442 aa10.47□□□□□ -0.73
CHMP3-204ENST00000409727 GABRA2P47869 451 aa10.47□□□□□ -0.73
CHMP3-204ENST00000409727 EFNB3Q15768 340 aa10.47□□□□□ -0.73
CHMP3-204ENST00000409727 C5orf24Q7Z6I8 188 aa10.47□□□□□ -0.73
CHMP3-204ENST00000409727 CCDC107Q8WV48 283 aa10.47□□□□□ -0.73
CHMP3-204ENST00000409727 DEDD2Q8WXF8 326 aa10.47□□□□□ -0.73
CHMP3-204ENST00000409727 DACT3Q96B18 629 aaPredicted RBP10.47□□□□□ -0.73
CHMP3-204ENST00000409727 DIRC2Q96SL1 478 aa10.47□□□□□ -0.73
CHMP3-204ENST00000409727 VRK1Q99986 396 aaPredicted RBP10.47□□□□□ -0.73
CHMP3-204ENST00000409727 EGLN1Q9GZT9 426 aa10.47□□□□□ -0.73
CHMP3-204ENST00000409727 EHFQ9NZC4 300 aa10.47□□□□□ -0.73
CHMP3-204ENST00000409727 PSPNO60542 156 aa10.47□□□□□ -0.73
CHMP3-204ENST00000409727 KNG1P01042 644 aa10.47□□□□□ -0.73
CHMP3-204ENST00000409727 RLN1P04808 185 aa10.47□□□□□ -0.73
CHMP3-204ENST00000409727 IRF2P14316 349 aa10.47□□□□□ -0.73
CHMP3-204ENST00000409727 DTYMKP23919 212 aa10.47□□□□□ -0.73
CHMP3-204ENST00000409727 TSPAN5P62079 268 aa10.47□□□□□ -0.73
CHMP3-204ENST00000409727 SNRPD2P62316 118 aaKnown RBP10.47□□□□□ -0.73
CHMP3-204ENST00000409727 COL10A1Q03692 680 aa10.47□□□□□ -0.73
CHMP3-204ENST00000409727 RBM39Q14498 530 aaKnown RBP10.47□□□□□ -0.73
CHMP3-204ENST00000409727 RBMS2Q15434 407 aaKnown RBP10.47□□□□□ -0.73
CHMP3-204ENST00000409727 C20orf204Q6ZNR8 217 aa10.47□□□□□ -0.73
CHMP3-204ENST00000409727 ASCC1Q8N9N2 400 aaKnown RBP10.47□□□□□ -0.73
CHMP3-204ENST00000409727 DEFB108BQ8NET1 73 aa10.47□□□□□ -0.73
CHMP3-204ENST00000409727 OR5AP2Q8NGF4 316 aa10.47□□□□□ -0.73
CHMP3-204ENST00000409727 OR11L1Q8NGX0 322 aa10.47□□□□□ -0.73
CHMP3-204ENST00000409727 OR10Z1Q8NGY1 313 aa10.47□□□□□ -0.73
CHMP3-204ENST00000409727 MS4A5Q9H3V2 200 aa10.47□□□□□ -0.73
CHMP3-204ENST00000409727 IFT22Q9H7X7 185 aa10.47□□□□□ -0.73
CHMP3-204ENST00000409727 RNF7Q9UBF6 113 aa10.47□□□□□ -0.73
CHMP3-204ENST00000409727 ANXA10Q9UJ72 324 aa10.47□□□□□ -0.73
CHMP3-204ENST00000409727 SCP2D1Q9UJQ7 156 aa10.47□□□□□ -0.73
CHMP3-204ENST00000409727 WIPI2Q9Y4P8 454 aa10.47□□□□□ -0.73
CHMP3-204ENST00000409727 NPTNQ9Y639 398 aa10.47□□□□□ -0.73
CHMP3-204ENST00000409727 ALG5Q9Y673 324 aa10.47□□□□□ -0.73
CHMP3-204ENST00000409727 TRAV39A0A0B4J263 110 aa10.46□□□□□ -0.74
CHMP3-204ENST00000409727 OR2AT4A6NND4 320 aa10.46□□□□□ -0.74
CHMP3-204ENST00000409727 H3BUI4 141 aa10.46□□□□□ -0.74
CHMP3-204ENST00000409727 LHBP01229 141 aa10.46□□□□□ -0.74
CHMP3-204ENST00000409727 CD55P08174 381 aa10.46□□□□□ -0.74
CHMP3-204ENST00000409727 PSG2P11465 335 aa10.46□□□□□ -0.74
CHMP3-204ENST00000409727 ANXA7P20073 488 aaKnown RBP10.46□□□□□ -0.74
CHMP3-204ENST00000409727 TBPP20226 339 aa10.46□□□□□ -0.74
CHMP3-204ENST00000409727 TAS2R46P59540 309 aa10.46□□□□□ -0.74
CHMP3-204ENST00000409727 TESK1Q15569 626 aa10.46□□□□□ -0.74
CHMP3-204ENST00000409727 CD177Q8N6Q3 437 aa10.46□□□□□ -0.74
CHMP3-204ENST00000409727 PLPPR1Q8TBJ4 325 aa10.46□□□□□ -0.74
CHMP3-204ENST00000409727 CCL17Q92583 94 aa10.46□□□□□ -0.74
CHMP3-204ENST00000409727 RASL12Q9NYN1 266 aa10.46□□□□□ -0.74
CHMP3-204ENST00000409727 IGKV1D-17A0A075B6S4 117 aa10.45□□□□□ -0.74
CHMP3-204ENST00000409727 ADH4P08319 380 aa10.45□□□□□ -0.74
CHMP3-204ENST00000409727 PRDX2P32119 198 aa10.45□□□□□ -0.74
CHMP3-204ENST00000409727 CFHR2P36980 270 aa10.45□□□□□ -0.74
CHMP3-204ENST00000409727 SWI5Q1ZZU3 235 aa10.45□□□□□ -0.74
CHMP3-204ENST00000409727 ACTBL2Q562R1 376 aa10.45□□□□□ -0.74
CHMP3-204ENST00000409727 FAM209AQ5JX71 171 aa10.45□□□□□ -0.74
CHMP3-204ENST00000409727 MEX3BQ6ZN04 569 aaKnown RBP10.45□□□□□ -0.74
CHMP3-204ENST00000409727 TMED4Q7Z7H5 227 aa10.45□□□□□ -0.74
CHMP3-204ENST00000409727 MRPL30Q8TCC3 161 aaKnown RBP10.45□□□□□ -0.74
CHMP3-204ENST00000409727 FAM222BQ8WU58 562 aa10.45□□□□□ -0.74
CHMP3-204ENST00000409727 GIMAP1Q8WWP7 306 aa10.45□□□□□ -0.74
CHMP3-204ENST00000409727 PRRT1Q99946 306 aa10.45□□□□□ -0.74
CHMP3-204ENST00000409727 ZNF286AQ9HBT8 521 aa10.45□□□□□ -0.74
CHMP3-204ENST00000409727 TMEM165Q9HC07 324 aa10.45□□□□□ -0.74
CHMP3-204ENST00000409727 EDARQ9UNE0 448 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms