RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 COL11A1P12107 1806 aaPredicted RBP6.44□□□□□ -1.38
SCN9A-202ENST00000409435 DAOP14920 347 aa6.44□□□□□ -1.38
SCN9A-202ENST00000409435 BTF3P20290 206 aaKnown RBP6.44□□□□□ -1.38
SCN9A-202ENST00000409435 DDTP30046 118 aa6.44□□□□□ -1.38
SCN9A-202ENST00000409435 TAS2R60P59551 318 aa6.44□□□□□ -1.38
SCN9A-202ENST00000409435 ADIPOQQ15848 244 aa6.44□□□□□ -1.38
SCN9A-202ENST00000409435 HIKESHIQ53FT3 197 aa6.44□□□□□ -1.38
SCN9A-202ENST00000409435 OR8G2PQ6IF36 304 aa6.44□□□□□ -1.38
SCN9A-202ENST00000409435 LHFPL2Q6ZUX7 228 aa6.44□□□□□ -1.38
SCN9A-202ENST00000409435 MBOAT2Q6ZWT7 520 aa6.44□□□□□ -1.38
SCN9A-202ENST00000409435 MEPCEQ7L2J0 689 aaKnown RBP6.44□□□□□ -1.38
SCN9A-202ENST00000409435 CCDC190Q86UF4 302 aa6.44□□□□□ -1.38
SCN9A-202ENST00000409435 THNSL2Q86YJ6 484 aa6.44□□□□□ -1.38
SCN9A-202ENST00000409435 FAM71CQ8NEG0 241 aa6.44□□□□□ -1.38
SCN9A-202ENST00000409435 OR9Q2Q8NGE9 314 aa6.44□□□□□ -1.38
SCN9A-202ENST00000409435 OR5M11Q96RB7 305 aa6.44□□□□□ -1.38
SCN9A-202ENST00000409435 OR8B4Q96RC9 309 aa6.44□□□□□ -1.38
SCN9A-202ENST00000409435 WDR61Q9GZS3 305 aaKnown RBP6.44□□□□□ -1.38
SCN9A-202ENST00000409435 GPR55Q9Y2T6 319 aaPredicted RBP6.44□□□□□ -1.38
SCN9A-202ENST00000409435 PATJQ8NI35 1801 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 CRXO43186 299 aaPredicted RBP6.43□□□□□ -1.38
SCN9A-202ENST00000409435 MPZL1O95297 269 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 GABRB1P18505 474 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 DLK1P80370 383 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 GUCA2AQ02747 115 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 PABPC1L2AQ5JQF8 200 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 HSD17B13Q7Z5P4 300 aaPredicted RBP6.43□□□□□ -1.38
SCN9A-202ENST00000409435 ADGRG5Q8IZF4 528 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 GRAMD2BQ96HH9 432 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 IGLV3-16A0A075B6K0 115 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 NRASP01111 189 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 EMDP50402 254 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 CCL8P80075 99 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 BHLHA9Q7RTU4 235 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 ERASQ7Z444 233 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 STPG2Q8N412 459 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 OR2AK2Q8NG84 335 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 SECTM1Q8WVN6 248 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 PHYHIPQ92561 330 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 ANGPTL4Q9BY76 406 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 NECAP2Q9NVZ3 263 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 OR52A1Q9UKL2 312 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 PAM16Q9Y3D7 125 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 CNTRLQ7Z7A1 2325 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 DUXBA0A1W2PPF3 345 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 PMP2P02689 132 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 ARG1P05089 322 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 SMIM17P0DL12 118 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 SLC25A16P16260 332 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 GCSHP23434 173 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 FAM27E3Q08E93 113 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 ZIC1Q15915 447 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 AMMECR1LQ6DCA0 310 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 VN1R4Q7Z5H5 301 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 ZNF683Q8IZ20 524 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 PRSS35Q8N3Z0 413 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 OR13C6PQ8NH95 151 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 KCNG3Q8TAE7 436 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 SEH1LQ96EE3 360 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 LPAR5Q9H1C0 372 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 EPHA2P29317 976 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 SKP2Q13309 424 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 LY6EQ16553 131 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 RPEL1Q2QD12 228 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 OR51A2Q8NGJ7 313 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 ZNF665Q9H7R5 613 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 CGGBP1Q9UFW8 167 aaPredicted RBP6.43□□□□□ -1.38
SCN9A-202ENST00000409435 TRAPPC4Q9Y296 219 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 AUP1Q9Y679 476 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 MAP1BP46821 2468 aaKnown RBP6.43□□□□□ -1.38
SCN9A-202ENST00000409435 LOC105371242A0A075B767 164 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 TCRBV3S1A0A5B6 114 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 CDRT15L2A8MXV6 281 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 FAM157AC9JC47 383 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 SYNGR3O43761 229 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 TIAF1O95411 115 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 ORM1P02763 201 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 GYPBP06028 91 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 HTR1FP30939 366 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 RPS25P62851 125 aaKnown RBP6.43□□□□□ -1.38
SCN9A-202ENST00000409435 PAFAH1B2P68402 229 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 VMA21Q3ZAQ7 101 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 DOLPP1Q86YN1 238 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 Q8IYB0 196 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 OR8D4Q8NGM9 314 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 SLC35E1Q96K37 410 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 ZNF300Q96RE9 604 aaPredicted RBP6.43□□□□□ -1.38
SCN9A-202ENST00000409435 ATP5SQ99766 215 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 SLC35B3Q9H1N7 401 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 TXNIPQ9H3M7 391 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 ZDHHC8Q9ULC8 765 aa6.43□□□□□ -1.38
SCN9A-202ENST00000409435 IGHV3OR16-10A0A075B7F0 116 aa6.42□□□□□ -1.38
SCN9A-202ENST00000409435 M0QYG6 137 aa6.42□□□□□ -1.38
SCN9A-202ENST00000409435 VSIG10L2P0DP72 767 aa6.42□□□□□ -1.38
SCN9A-202ENST00000409435 ACHEP22303 614 aa6.42□□□□□ -1.38
SCN9A-202ENST00000409435 CA6P23280 308 aa6.42□□□□□ -1.38
SCN9A-202ENST00000409435 NPBWR2P48146 333 aa6.42□□□□□ -1.38
SCN9A-202ENST00000409435 FOXL2P58012 376 aa6.42□□□□□ -1.38
SCN9A-202ENST00000409435 PAX5Q02548 391 aa6.42□□□□□ -1.38
SCN9A-202ENST00000409435 TMEM241Q24JQ0 296 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms