RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 GPR1P46091 355 aa9.28□□□□□ -0.92
NIF3L1-204ENST00000409357 EMP2P54851 167 aa9.28□□□□□ -0.92
NIF3L1-204ENST00000409357 ADAMTSL4Q6UY14 1074 aa9.28□□□□□ -0.92
NIF3L1-204ENST00000409357 TMEM182Q6ZP80 229 aaPredicted RBP9.28□□□□□ -0.92
NIF3L1-204ENST00000409357 PRSS58Q8IYP2 241 aa9.28□□□□□ -0.92
NIF3L1-204ENST00000409357 OR2G3Q8NGZ4 309 aa9.28□□□□□ -0.92
NIF3L1-204ENST00000409357 CCL4L1Q8NHW4 92 aa9.28□□□□□ -0.92
NIF3L1-204ENST00000409357 SCARF2Q96GP6 870 aaPredicted RBP9.28□□□□□ -0.92
NIF3L1-204ENST00000409357 TSSK2Q96PF2 358 aa9.28□□□□□ -0.92
NIF3L1-204ENST00000409357 YPEL2Q96QA6 119 aa9.28□□□□□ -0.92
NIF3L1-204ENST00000409357 AMELYQ99218 206 aa9.28□□□□□ -0.92
NIF3L1-204ENST00000409357 LSM5Q9Y4Y9 91 aaKnown RBP9.28□□□□□ -0.92
NIF3L1-204ENST00000409357 LIPGQ9Y5X9 500 aa9.28□□□□□ -0.92
NIF3L1-204ENST00000409357 C20orf202A1L168 122 aa9.27□□□□□ -0.93
NIF3L1-204ENST00000409357 LMO7DNF2Z398 122 aa9.27□□□□□ -0.93
NIF3L1-204ENST00000409357 LCATP04180 440 aa9.27□□□□□ -0.93
NIF3L1-204ENST00000409357 ESDP10768 282 aa9.27□□□□□ -0.93
NIF3L1-204ENST00000409357 DUSP1P28562 367 aa9.27□□□□□ -0.93
NIF3L1-204ENST00000409357 GABRA3P34903 492 aa9.27□□□□□ -0.93
NIF3L1-204ENST00000409357 ALDH3B1P43353 468 aa9.27□□□□□ -0.93
NIF3L1-204ENST00000409357 RPL29P47914 159 aaKnown RBP9.27□□□□□ -0.93
NIF3L1-204ENST00000409357 EMDP50402 254 aa9.27□□□□□ -0.93
NIF3L1-204ENST00000409357 SLC37A1P57057 533 aa9.27□□□□□ -0.93
NIF3L1-204ENST00000409357 PAFAH1B2P68402 229 aa9.27□□□□□ -0.93
NIF3L1-204ENST00000409357 LCN2P80188 198 aa9.27□□□□□ -0.93
NIF3L1-204ENST00000409357 MGAT2Q10469 447 aa9.27□□□□□ -0.93
NIF3L1-204ENST00000409357 PRICKLE4Q2TBC4 344 aa9.27□□□□□ -0.93
NIF3L1-204ENST00000409357 ARMC6Q6NXE6 501 aa9.27□□□□□ -0.93
NIF3L1-204ENST00000409357 OR51G1Q8NGK1 321 aa9.27□□□□□ -0.93
NIF3L1-204ENST00000409357 CORO2AQ92828 525 aa9.27□□□□□ -0.93
NIF3L1-204ENST00000409357 MOB3AQ96BX8 217 aa9.27□□□□□ -0.93
NIF3L1-204ENST00000409357 LPAR4Q99677 370 aa9.27□□□□□ -0.93
NIF3L1-204ENST00000409357 SH3BGRL3Q9H299 93 aa9.27□□□□□ -0.93
NIF3L1-204ENST00000409357 MMP25Q9NPA2 562 aa9.27□□□□□ -0.93
NIF3L1-204ENST00000409357 G6PC2Q9NQR9 355 aa9.27□□□□□ -0.93
NIF3L1-204ENST00000409357 LYRM2Q9NU23 88 aaPredicted RBP9.27□□□□□ -0.93
NIF3L1-204ENST00000409357 AK3Q9UIJ7 227 aa9.27□□□□□ -0.93
NIF3L1-204ENST00000409357 PADI1Q9ULC6 663 aa9.27□□□□□ -0.93
NIF3L1-204ENST00000409357 B9D1Q9UPM9 204 aa9.27□□□□□ -0.93
NIF3L1-204ENST00000409357 AHCTF1Q8WYP5 2266 aa9.27□□□□□ -0.93
NIF3L1-204ENST00000409357 ATRXP46100 2492 aa9.27□□□□□ -0.93
NIF3L1-204ENST00000409357 TCF21O43680 179 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 TMEM11P17152 192 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 AMY2BP19961 511 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 HNF1AP20823 631 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 ATP6V0CP27449 155 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 SRP14P37108 136 aaKnown RBP9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 RPL23AP62750 156 aaKnown RBP9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 BTN3A2P78410 334 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 BAXQ07812 192 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 IL24Q13007 206 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 OR5I1Q13606 314 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 C4orf17Q53FE4 359 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 WBP2NLQ6ICG8 309 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 ZNF66Q6ZN08 573 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 ZNF705AQ6ZN79 300 aaPredicted RBP9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 ATG4DQ86TL0 474 aaPredicted RBP9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 ZNF100Q8IYN0 542 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 OR56B2PQ8NGI1 322 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 OR52N5Q8NH56 324 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 RNASE8Q8TDE3 154 aaKnown RBP9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 MBD3L1Q8WWY6 194 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 TSLPQ969D9 159 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 ANAPC16Q96DE5 110 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 BOD1Q96IK1 185 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 SLC35E1Q96K37 410 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 C18orf12Q96KH6 178 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 TSPAN32Q96QS1 320 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 GAL3ST4Q96RP7 486 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 DUSP23Q9BVJ7 150 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 ELL3Q9HB65 397 aaPredicted RBP9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 NAT8Q9UHE5 227 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 RAXQ9Y2V3 346 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 BOD1L1Q8NFC6 3051 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 NPIPA5A0A0B4J1W7 369 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 LOC107986453A0A1B0GWG9 222 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 A0A1W2PNU3 283 aaPredicted RBP9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 PRSS38A1L453 326 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 A6NCN8 305 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 FOXI3A8MTJ6 420 aaPredicted RBP9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 SERPINE3A8MV23 424 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 NPIPA7E9PJI5 369 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 CDS2O95674 445 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 CEACAM5P06731 702 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 NPIPA8P0DM63 369 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 ZNF10P21506 573 aaPredicted RBP9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 UCP1P25874 307 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 CMPK1P30085 196 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 RAB7AP51149 207 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 RPS15AP62244 130 aaKnown RBP9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 EWSR1Q01844 656 aaKnown RBP eCLIP9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 TRA2AQ13595 282 aaKnown RBP eCLIP9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 TMEM187Q14656 261 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 ATP6V1FQ16864 119 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 LINC01559Q495D7 138 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 MORN2Q502X0 79 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 OXLD1Q5BKU9 147 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 PLAC9Q5JTB6 97 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 CDCP2Q5VXM1 449 aa9.26□□□□□ -0.93
NIF3L1-204ENST00000409357 OR8G2PQ6IF36 304 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms