RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 PNLIPRP3Q17RR3 467 aa14.09□□□□□ -0.15
SSB-202ENST00000409333 TRIQKQ629K1 86 aa14.09□□□□□ -0.15
SSB-202ENST00000409333 STUMQ69YW2 141 aa14.09□□□□□ -0.15
SSB-202ENST00000409333 TRAPPC6BQ86SZ2 158 aa14.09□□□□□ -0.15
SSB-202ENST00000409333 MARVELD3Q96A59 401 aa14.09□□□□□ -0.15
SSB-202ENST00000409333 SPACA1Q9HBV2 294 aa14.09□□□□□ -0.15
SSB-202ENST00000409333 GLS2Q9UI32 602 aa14.09□□□□□ -0.15
SSB-202ENST00000409333 PPIAL4AQ9Y536 164 aa14.09□□□□□ -0.15
SSB-202ENST00000409333 VPS13CQ709C8 3753 aa14.08□□□□□ -0.15
SSB-202ENST00000409333 ANKRD17O75179 2603 aaKnown RBP14.08□□□□□ -0.16
SSB-202ENST00000409333 GYPAP02724 150 aa14.08□□□□□ -0.16
SSB-202ENST00000409333 LPLP06858 475 aa14.08□□□□□ -0.16
SSB-202ENST00000409333 MUC1P15941 1255 aaPredicted RBP14.08□□□□□ -0.16
SSB-202ENST00000409333 AMY2BP19961 511 aa14.08□□□□□ -0.16
SSB-202ENST00000409333 LMO1P25800 156 aa14.08□□□□□ -0.16
SSB-202ENST00000409333 ARL6IP1Q15041 203 aa14.08□□□□□ -0.16
SSB-202ENST00000409333 PAN3Q58A45 887 aaKnown RBP14.08□□□□□ -0.16
SSB-202ENST00000409333 NEK7Q8TDX7 302 aa14.08□□□□□ -0.16
SSB-202ENST00000409333 ZFAND2BQ8WV99 257 aa14.08□□□□□ -0.16
SSB-202ENST00000409333 CHST6Q9GZX3 395 aa14.08□□□□□ -0.16
SSB-202ENST00000409333 PPA2Q9H2U2 334 aa14.08□□□□□ -0.16
SSB-202ENST00000409333 SCPEP1Q9HB40 452 aa14.08□□□□□ -0.16
SSB-202ENST00000409333 DLL4Q9NR61 685 aa14.08□□□□□ -0.16
SSB-202ENST00000409333 RBMX2Q9Y388 322 aaKnown RBP14.08□□□□□ -0.16
SSB-202ENST00000409333 A0A1B0GW55 424 aa14.07□□□□□ -0.16
SSB-202ENST00000409333 TMEM82A0PJX8 343 aa14.07□□□□□ -0.16
SSB-202ENST00000409333 MCRIP1C9JLW8 97 aa14.07□□□□□ -0.16
SSB-202ENST00000409333 LGALS8O00214 317 aa14.07□□□□□ -0.16
SSB-202ENST00000409333 SULT1C2O00338 296 aa14.07□□□□□ -0.16
SSB-202ENST00000409333 ORC5O43913 435 aa14.07□□□□□ -0.16
SSB-202ENST00000409333 F12P00748 615 aaPredicted RBP14.07□□□□□ -0.16
SSB-202ENST00000409333 DUX4L2P0CJ85 424 aa14.07□□□□□ -0.16
SSB-202ENST00000409333 DUX4L3P0CJ86 424 aa14.07□□□□□ -0.16
SSB-202ENST00000409333 DUX4L4P0CJ87 422 aa14.07□□□□□ -0.16
SSB-202ENST00000409333 DUX4L5P0CJ88 424 aa14.07□□□□□ -0.16
SSB-202ENST00000409333 DUX4L6P0CJ89 424 aa14.07□□□□□ -0.16
SSB-202ENST00000409333 DUX4L7P0CJ90 424 aa14.07□□□□□ -0.16
SSB-202ENST00000409333 GDNFP39905 211 aa14.07□□□□□ -0.16
SSB-202ENST00000409333 KRTAP10-9P60411 292 aa14.07□□□□□ -0.16
SSB-202ENST00000409333 ZNF787Q6DD87 383 aa14.07□□□□□ -0.16
SSB-202ENST00000409333 DUX4L9Q6RFH8 374 aaPredicted RBP14.07□□□□□ -0.16
SSB-202ENST00000409333 LYSMD2Q8IV50 215 aa14.07□□□□□ -0.16
SSB-202ENST00000409333 GVQW1Q8N7I0 195 aa14.07□□□□□ -0.16
SSB-202ENST00000409333 PALMDQ9NP74 551 aa14.07□□□□□ -0.16
SSB-202ENST00000409333 DUX4Q9UBX2 424 aa14.07□□□□□ -0.16
SSB-202ENST00000409333 MTFP1Q9UDX5 166 aa14.07□□□□□ -0.16
SSB-202ENST00000409333 TRAV38-1A0A0B4J264 116 aa14.06□□□□□ -0.16
SSB-202ENST00000409333 LINC00854A0A1B0GVQ3 168 aa14.06□□□□□ -0.16
SSB-202ENST00000409333 EFNA4P52798 201 aa14.06□□□□□ -0.16
SSB-202ENST00000409333 BTG1P62324 171 aa14.06□□□□□ -0.16
SSB-202ENST00000409333 MRPS11P82912 194 aaKnown RBP14.06□□□□□ -0.16
SSB-202ENST00000409333 ATXN7L3Q14CW9 347 aaPredicted RBP14.06□□□□□ -0.16
SSB-202ENST00000409333 ZMYND11Q15326 602 aa14.06□□□□□ -0.16
SSB-202ENST00000409333 C17orf107Q6ZR85 190 aa14.06□□□□□ -0.16
SSB-202ENST00000409333 ASCC1Q8N9N2 400 aaKnown RBP14.06□□□□□ -0.16
SSB-202ENST00000409333 CMSS1Q9BQ75 279 aaKnown RBP14.06□□□□□ -0.16
SSB-202ENST00000409333 ZNF230Q9UIE0 474 aaPredicted RBP14.06□□□□□ -0.16
SSB-202ENST00000409333 ABCA12Q86UK0 2595 aa14.06□□□□□ -0.16
SSB-202ENST00000409333 H3BUI4 141 aa14.06□□□□□ -0.16
SSB-202ENST00000409333 ZNF737O75373 536 aa14.06□□□□□ -0.16
SSB-202ENST00000409333 CA11O75493 328 aa14.06□□□□□ -0.16
SSB-202ENST00000409333 RBBP9O75884 186 aa14.06□□□□□ -0.16
SSB-202ENST00000409333 SELLP14151 372 aa14.06□□□□□ -0.16
SSB-202ENST00000409333 SSTR2P30874 369 aa14.06□□□□□ -0.16
SSB-202ENST00000409333 Q6ZPA2 131 aa14.06□□□□□ -0.16
SSB-202ENST00000409333 ZNRF1Q8ND25 227 aa14.06□□□□□ -0.16
SSB-202ENST00000409333 OR4S1Q8NGB4 309 aa14.06□□□□□ -0.16
SSB-202ENST00000409333 PLPPR1Q8TBJ4 325 aa14.06□□□□□ -0.16
SSB-202ENST00000409333 MAFIPQ8WZ33 124 aa14.06□□□□□ -0.16
SSB-202ENST00000409333 GAFA1Q96PS6 74 aa14.06□□□□□ -0.16
SSB-202ENST00000409333 CCL13Q99616 98 aa14.06□□□□□ -0.16
SSB-202ENST00000409333 ING3Q9NXR8 418 aa14.06□□□□□ -0.16
SSB-202ENST00000409333 ETAA1Q9NY74 926 aa14.06□□□□□ -0.16
SSB-202ENST00000409333 MAB21L2Q9Y586 359 aa14.06□□□□□ -0.16
SSB-202ENST00000409333 IGHV4-39P01824 125 aa14.05□□□□□ -0.16
SSB-202ENST00000409333 OR3A1P47881 315 aa14.05□□□□□ -0.16
SSB-202ENST00000409333 RBM39Q14498 530 aaKnown RBP14.05□□□□□ -0.16
SSB-202ENST00000409333 AVPI1Q5T686 147 aa14.05□□□□□ -0.16
SSB-202ENST00000409333 ZNF57Q68EA5 555 aaPredicted RBP14.05□□□□□ -0.16
SSB-202ENST00000409333 FAM216BQ8N7L0 139 aa14.05□□□□□ -0.16
SSB-202ENST00000409333 SHARPINQ9H0F6 387 aa14.05□□□□□ -0.16
SSB-202ENST00000409333 SEBOXQ9HB31 216 aaPredicted RBP14.05□□□□□ -0.16
SSB-202ENST00000409333 TMEM165Q9HC07 324 aa14.05□□□□□ -0.16
SSB-202ENST00000409333 ZNF701Q9NV72 531 aaPredicted RBP14.05□□□□□ -0.16
SSB-202ENST00000409333 TBC1D24Q9ULP9 559 aa14.05□□□□□ -0.16
SSB-202ENST00000409333 IGHV2-70P01814 119 aa14.04□□□□□ -0.16
SSB-202ENST00000409333 GLAP06280 429 aa14.04□□□□□ -0.16
SSB-202ENST00000409333 INPP1P49441 399 aa14.04□□□□□ -0.16
SSB-202ENST00000409333 MRPS15P82914 257 aaKnown RBP14.04□□□□□ -0.16
SSB-202ENST00000409333 CARTPTQ16568 116 aa14.04□□□□□ -0.16
SSB-202ENST00000409333 ZNF788Q6ZQV5 615 aa14.04□□□□□ -0.16
SSB-202ENST00000409333 SDSLQ96GA7 329 aa14.04□□□□□ -0.16
SSB-202ENST00000409333 CHODLQ9H9P2 273 aa14.04□□□□□ -0.16
SSB-202ENST00000409333 C12orf4Q9NQ89 552 aa14.04□□□□□ -0.16
SSB-202ENST00000409333 IFT46Q9NQC8 304 aa14.04□□□□□ -0.16
SSB-202ENST00000409333 POLQO75417 2590 aa14.04□□□□□ -0.16
SSB-202ENST00000409333 TMPRSS2O15393 492 aa14.04□□□□□ -0.16
SSB-202ENST00000409333 FCGR3AP08637 254 aa14.04□□□□□ -0.16
SSB-202ENST00000409333 ACTBP60709 375 aa14.04□□□□□ -0.16
SSB-202ENST00000409333 ACTG1P63261 375 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms