RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 LINC00596Q86U02 117 aa17.2■□□□□ 0.34
C4orf48-201ENST00000409248 CD177Q8N6Q3 437 aa17.2■□□□□ 0.34
C4orf48-201ENST00000409248 TMEM104Q8NE00 496 aa17.2■□□□□ 0.34
C4orf48-201ENST00000409248 SLC25A46Q96AG3 418 aa17.2■□□□□ 0.34
C4orf48-201ENST00000409248 SDSLQ96GA7 329 aa17.2■□□□□ 0.34
C4orf48-201ENST00000409248 GAFA1Q96PS6 74 aa17.2■□□□□ 0.34
C4orf48-201ENST00000409248 TMEM59Q9BXS4 323 aa17.2■□□□□ 0.34
C4orf48-201ENST00000409248 BANF2Q9H503 90 aa17.2■□□□□ 0.34
C4orf48-201ENST00000409248 A0A1B0GW55 424 aa17.19■□□□□ 0.34
C4orf48-201ENST00000409248 TMEM14DPA8MWL7 114 aa17.19■□□□□ 0.34
C4orf48-201ENST00000409248 FSHBP01225 129 aa17.19■□□□□ 0.34
C4orf48-201ENST00000409248 TFF1P04155 84 aa17.19■□□□□ 0.34
C4orf48-201ENST00000409248 DUX4L2P0CJ85 424 aa17.19■□□□□ 0.34
C4orf48-201ENST00000409248 DUX4L3P0CJ86 424 aa17.19■□□□□ 0.34
C4orf48-201ENST00000409248 DUX4L4P0CJ87 422 aa17.19■□□□□ 0.34
C4orf48-201ENST00000409248 DUX4L5P0CJ88 424 aa17.19■□□□□ 0.34
C4orf48-201ENST00000409248 DUX4L6P0CJ89 424 aa17.19■□□□□ 0.34
C4orf48-201ENST00000409248 DUX4L7P0CJ90 424 aa17.19■□□□□ 0.34
C4orf48-201ENST00000409248 AMY2BP19961 511 aa17.19■□□□□ 0.34
C4orf48-201ENST00000409248 C2orf76Q3KRA6 126 aa17.19■□□□□ 0.34
C4orf48-201ENST00000409248 OR10K2Q6IF99 312 aa17.19■□□□□ 0.34
C4orf48-201ENST00000409248 DUX4L9Q6RFH8 374 aaPredicted RBP17.19■□□□□ 0.34
C4orf48-201ENST00000409248 BTN2A1Q7KYR7 527 aa17.19■□□□□ 0.34
C4orf48-201ENST00000409248 ZNF561Q8N587 486 aa17.19■□□□□ 0.34
C4orf48-201ENST00000409248 SELENOIQ9C0D9 397 aa17.19■□□□□ 0.34
C4orf48-201ENST00000409248 RBM38Q9H0Z9 239 aaKnown RBP17.19■□□□□ 0.34
C4orf48-201ENST00000409248 KCNK15Q9H427 330 aa17.19■□□□□ 0.34
C4orf48-201ENST00000409248 NDUFA13Q9P0J0 144 aa17.19■□□□□ 0.34
C4orf48-201ENST00000409248 DUX4Q9UBX2 424 aa17.19■□□□□ 0.34
C4orf48-201ENST00000409248 SLC25A10Q9UBX3 287 aaPredicted RBP17.19■□□□□ 0.34
C4orf48-201ENST00000409248 FBLN5Q9UBX5 448 aa17.19■□□□□ 0.34
C4orf48-201ENST00000409248 RSL24D1Q9UHA3 163 aaKnown RBP17.19■□□□□ 0.34
C4orf48-201ENST00000409248 A0A0B4J203 849 aa17.18■□□□□ 0.34
C4orf48-201ENST00000409248 H3BMQ9 156 aa17.18■□□□□ 0.34
C4orf48-201ENST00000409248 DEGS1O15121 323 aa17.18■□□□□ 0.34
C4orf48-201ENST00000409248 ZNF44P15621 663 aa17.18■□□□□ 0.34
C4orf48-201ENST00000409248 QRFPP83859 136 aa17.18■□□□□ 0.34
C4orf48-201ENST00000409248 COL10A1Q03692 680 aa17.18■□□□□ 0.34
C4orf48-201ENST00000409248 SPCS2Q15005 226 aa17.18■□□□□ 0.34
C4orf48-201ENST00000409248 MPV17LQ2QL34 196 aa17.18■□□□□ 0.34
C4orf48-201ENST00000409248 ASCC1Q8N9N2 400 aaKnown RBP17.18■□□□□ 0.34
C4orf48-201ENST00000409248 CHST4Q8NCG5 386 aa17.18■□□□□ 0.34
C4orf48-201ENST00000409248 UPRTQ96BW1 309 aa17.18■□□□□ 0.34
C4orf48-201ENST00000409248 RPUSD1Q9UJJ7 312 aaKnown RBP17.18■□□□□ 0.34
C4orf48-201ENST00000409248 TMEM272A0A1B0GTI8 110 aa17.17■□□□□ 0.34
C4orf48-201ENST00000409248 ZNF701M0R085 212 aaPredicted RBP17.17■□□□□ 0.34
C4orf48-201ENST00000409248 TCF21O43680 179 aa17.17■□□□□ 0.34
C4orf48-201ENST00000409248 FCN3O75636 299 aa17.17■□□□□ 0.34
C4orf48-201ENST00000409248 OR7C1O76099 320 aaPredicted RBP17.17■□□□□ 0.34
C4orf48-201ENST00000409248 OR2H2O95918 312 aa17.17■□□□□ 0.34
C4orf48-201ENST00000409248 SELLP14151 372 aa17.17■□□□□ 0.34
C4orf48-201ENST00000409248 RORCP51449 518 aa17.17■□□□□ 0.34
C4orf48-201ENST00000409248 SCAND1P57086 179 aa17.17■□□□□ 0.34
C4orf48-201ENST00000409248 RPS27AP62979 156 aaKnown RBP17.17■□□□□ 0.34
C4orf48-201ENST00000409248 SCN1BQ07699 218 aa17.17■□□□□ 0.34
C4orf48-201ENST00000409248 UNC119Q13432 240 aa17.17■□□□□ 0.34
C4orf48-201ENST00000409248 TMEM185AQ8NFB2 350 aa17.17■□□□□ 0.34
C4orf48-201ENST00000409248 PPP1R35Q8TAP8 253 aa17.17■□□□□ 0.34
C4orf48-201ENST00000409248 Q96M66 194 aa17.17■□□□□ 0.34
C4orf48-201ENST00000409248 DMRTB1Q96MA1 342 aa17.17■□□□□ 0.34
C4orf48-201ENST00000409248 URM1Q9BTM9 101 aaKnown RBP17.17■□□□□ 0.34
C4orf48-201ENST00000409248 OCEL1Q9H607 264 aa17.17■□□□□ 0.34
C4orf48-201ENST00000409248 RAB22AQ9UL26 194 aa17.17■□□□□ 0.34
C4orf48-201ENST00000409248 MAB21L2Q9Y586 359 aa17.17■□□□□ 0.34
C4orf48-201ENST00000409248 FAM90A10PA6NDY2 464 aa17.16■□□□□ 0.34
C4orf48-201ENST00000409248 FAM90A18PA6NE21 464 aa17.16■□□□□ 0.34
C4orf48-201ENST00000409248 FAM90A16PA6NEW6 464 aa17.16■□□□□ 0.34
C4orf48-201ENST00000409248 FAM90A20PA6NIJ5 464 aa17.16■□□□□ 0.34
C4orf48-201ENST00000409248 FAM90A8PA6NJQ4 464 aa17.16■□□□□ 0.34
C4orf48-201ENST00000409248 FAM90A7PA6NKC0 464 aa17.16■□□□□ 0.34
C4orf48-201ENST00000409248 FAM90A22PA8MWA6 464 aa17.16■□□□□ 0.34
C4orf48-201ENST00000409248 FAM90A12PA8MX19 464 aa17.16■□□□□ 0.34
C4orf48-201ENST00000409248 FAM90A5PA8MXJ8 464 aa17.16■□□□□ 0.34
C4orf48-201ENST00000409248 FAM90A23PA8MXZ1 464 aa17.16■□□□□ 0.34
C4orf48-201ENST00000409248 H3BUI4 141 aa17.16■□□□□ 0.34
C4orf48-201ENST00000409248 SIRPB1O00241 398 aa17.16■□□□□ 0.34
C4orf48-201ENST00000409248 GEMIN2O14893 280 aaKnown RBP17.16■□□□□ 0.34
C4orf48-201ENST00000409248 LDLRAD4O15165 306 aa17.16■□□□□ 0.34
C4orf48-201ENST00000409248 FAM90A15PP0C7V4 464 aa17.16■□□□□ 0.34
C4orf48-201ENST00000409248 FAM90A13PP0C7W8 464 aa17.16■□□□□ 0.34
C4orf48-201ENST00000409248 FAM90A14PP0C7W9 464 aa17.16■□□□□ 0.34
C4orf48-201ENST00000409248 FAM90A24PP0C7X0 464 aa17.16■□□□□ 0.34
C4orf48-201ENST00000409248 SNRPBP14678 240 aaKnown RBP17.16■□□□□ 0.34
C4orf48-201ENST00000409248 NDUFB7P17568 137 aa17.16■□□□□ 0.34
C4orf48-201ENST00000409248 GABRR1P24046 479 aa17.16■□□□□ 0.34
C4orf48-201ENST00000409248 FAM189A2Q15884 450 aa17.16■□□□□ 0.34
C4orf48-201ENST00000409248 TAF9Q16594 264 aa17.16■□□□□ 0.34
C4orf48-201ENST00000409248 METTL11BQ5VVY1 283 aa17.16■□□□□ 0.34
C4orf48-201ENST00000409248 Q6P435 159 aa17.16■□□□□ 0.34
C4orf48-201ENST00000409248 BPIFB2Q8N4F0 458 aa17.16■□□□□ 0.34
C4orf48-201ENST00000409248 ZNRF1Q8ND25 227 aa17.16■□□□□ 0.34
C4orf48-201ENST00000409248 LGALS14Q8TCE9 139 aa17.16■□□□□ 0.34
C4orf48-201ENST00000409248 ZNF418Q8TF45 676 aaPredicted RBP17.16■□□□□ 0.34
C4orf48-201ENST00000409248 H1FXQ92522 213 aaKnown RBP17.16■□□□□ 0.34
C4orf48-201ENST00000409248 FAM234AQ9H0X4 552 aa17.16■□□□□ 0.34
C4orf48-201ENST00000409248 ABRACLQ9P1F3 81 aa17.16■□□□□ 0.34
C4orf48-201ENST00000409248 NUP50Q9UKX7 468 aa17.16■□□□□ 0.34
C4orf48-201ENST00000409248 MXRA5Q9NR99 2828 aa17.15■□□□□ 0.34
C4orf48-201ENST00000409248 DPPA5A6NC42 116 aa17.15■□□□□ 0.34
C4orf48-201ENST00000409248 RAB6AP20340 208 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms