RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 HIST1H1BP16401 226 aaKnown RBP15.59■□□□□ 0.09
SMPD4-202ENST00000409031 RPS4XP62701 263 aaKnown RBP15.59■□□□□ 0.09
SMPD4-202ENST00000409031 EXT1Q16394 746 aa15.59■□□□□ 0.09
SMPD4-202ENST00000409031 NHLRC2Q8NBF2 726 aa15.59■□□□□ 0.09
SMPD4-202ENST00000409031 OR10AD1Q8NGE0 317 aa15.59■□□□□ 0.09
SMPD4-202ENST00000409031 OR13G1Q8NGZ3 307 aa15.59■□□□□ 0.09
SMPD4-202ENST00000409031 RNF222A6NCQ9 220 aa15.58■□□□□ 0.09
SMPD4-202ENST00000409031 PPP1CCP36873 323 aaKnown RBP15.58■□□□□ 0.09
SMPD4-202ENST00000409031 ID4P47928 161 aa15.58■□□□□ 0.09
SMPD4-202ENST00000409031 PRSS53Q2L4Q9 553 aa15.58■□□□□ 0.09
SMPD4-202ENST00000409031 C2orf68Q2NKX9 166 aa15.58■□□□□ 0.09
SMPD4-202ENST00000409031 TRIM61Q5EBN2 209 aa15.58■□□□□ 0.09
SMPD4-202ENST00000409031 LEMD1Q68G75 181 aa15.58■□□□□ 0.09
SMPD4-202ENST00000409031 TMEM183AQ8IXX5 376 aa15.58■□□□□ 0.09
SMPD4-202ENST00000409031 PTPMT1Q8WUK0 201 aaPredicted RBP15.58■□□□□ 0.09
SMPD4-202ENST00000409031 ADAT3Q96EY9 351 aaPredicted RBP15.58■□□□□ 0.09
SMPD4-202ENST00000409031 BRS3P32247 399 aa15.58■□□□□ 0.08
SMPD4-202ENST00000409031 S1PR3Q99500 378 aa15.58■□□□□ 0.08
SMPD4-202ENST00000409031 C5orf49A4QMS7 147 aa15.58■□□□□ 0.08
SMPD4-202ENST00000409031 PAGE4O60829 102 aa15.58■□□□□ 0.08
SMPD4-202ENST00000409031 IGHV3-9P01782 118 aa15.58■□□□□ 0.08
SMPD4-202ENST00000409031 OR5G3P0C626 314 aa15.58■□□□□ 0.08
SMPD4-202ENST00000409031 ARR3P36575 388 aa15.58■□□□□ 0.08
SMPD4-202ENST00000409031 ARG2P78540 354 aa15.58■□□□□ 0.08
SMPD4-202ENST00000409031 RPL24P83731 157 aaKnown RBP15.58■□□□□ 0.08
SMPD4-202ENST00000409031 CD226Q15762 336 aa15.58■□□□□ 0.08
SMPD4-202ENST00000409031 C1QL3Q5VWW1 255 aa15.58■□□□□ 0.08
SMPD4-202ENST00000409031 HSPB9Q9BQS6 159 aa15.58■□□□□ 0.08
SMPD4-202ENST00000409031 P4HTMQ9NXG6 502 aa15.58■□□□□ 0.08
SMPD4-202ENST00000409031 UQCR10Q9UDW1 63 aa15.58■□□□□ 0.08
SMPD4-202ENST00000409031 ANKRD55Q3KP44 614 aa15.57■□□□□ 0.08
SMPD4-202ENST00000409031 SGMS2Q8NHU3 365 aa15.57■□□□□ 0.08
SMPD4-202ENST00000409031 ASB10Q8WXI3 467 aa15.57■□□□□ 0.08
SMPD4-202ENST00000409031 SMIM8Q96KF7 97 aa15.57■□□□□ 0.08
SMPD4-202ENST00000409031 TBX21Q9UL17 535 aa15.57■□□□□ 0.08
SMPD4-202ENST00000409031 COL24A1Q17RW2 1714 aa15.57■□□□□ 0.08
SMPD4-202ENST00000409031 A0A1B0GU03 582 aa15.57■□□□□ 0.08
SMPD4-202ENST00000409031 B4GALT1P15291 398 aa15.57■□□□□ 0.08
SMPD4-202ENST00000409031 TGIF1Q15583 401 aa15.57■□□□□ 0.08
SMPD4-202ENST00000409031 BTNL3Q6UXE8 466 aa15.57■□□□□ 0.08
SMPD4-202ENST00000409031 ZNF296Q8WUU4 475 aaPredicted RBP15.57■□□□□ 0.08
SMPD4-202ENST00000409031 RP1P56715 2156 aa15.57■□□□□ 0.08
SMPD4-202ENST00000409031 SNURFLB1AK76 121 aa15.57■□□□□ 0.08
SMPD4-202ENST00000409031 IGHEP01854 428 aa15.57■□□□□ 0.08
SMPD4-202ENST00000409031 ROM1Q03395 351 aa15.57■□□□□ 0.08
SMPD4-202ENST00000409031 HLA-BQ31612 363 aa15.57■□□□□ 0.08
SMPD4-202ENST00000409031 OR1L6Q8NGR2 347 aa15.57■□□□□ 0.08
SMPD4-202ENST00000409031 CA3P07451 260 aa15.57■□□□□ 0.08
SMPD4-202ENST00000409031 SPPL3Q8TCT6 385 aa15.57■□□□□ 0.08
SMPD4-202ENST00000409031 GMPPAQ96IJ6 420 aaPredicted RBP15.57■□□□□ 0.08
SMPD4-202ENST00000409031 DCAF16Q9NXF7 216 aa15.57■□□□□ 0.08
SMPD4-202ENST00000409031 SELEP16581 610 aa15.56■□□□□ 0.08
SMPD4-202ENST00000409031 HIST3H3Q16695 136 aa15.56■□□□□ 0.08
SMPD4-202ENST00000409031 TMEM211Q6ICI0 200 aa15.56■□□□□ 0.08
SMPD4-202ENST00000409031 KISS1RQ969F8 398 aaPredicted RBP15.56■□□□□ 0.08
SMPD4-202ENST00000409031 ABHD14BQ96IU4 210 aa15.56■□□□□ 0.08
SMPD4-202ENST00000409031 LPAR5Q9H1C0 372 aa15.56■□□□□ 0.08
SMPD4-202ENST00000409031 HIF1ANQ9NWT6 349 aa15.56■□□□□ 0.08
SMPD4-202ENST00000409031 STRCQ7RTU9 1775 aa15.56■□□□□ 0.08
SMPD4-202ENST00000409031 TRAV14DV4A0A0A6YYC5 116 aa15.56■□□□□ 0.08
SMPD4-202ENST00000409031 CASP6P55212 293 aa15.56■□□□□ 0.08
SMPD4-202ENST00000409031 ETV3LQ6ZN32 361 aa15.56■□□□□ 0.08
SMPD4-202ENST00000409031 OR5AS1Q8N127 324 aa15.56■□□□□ 0.08
SMPD4-202ENST00000409031 PCGF1Q9BSM1 259 aa15.56■□□□□ 0.08
SMPD4-202ENST00000409031 REG4Q9BYZ8 158 aa15.56■□□□□ 0.08
SMPD4-202ENST00000409031 RUNX1Q01196 453 aa15.56■□□□□ 0.08
SMPD4-202ENST00000409031 WDR61Q9GZS3 305 aaKnown RBP15.56■□□□□ 0.08
SMPD4-202ENST00000409031 METTL12A8MUP2 240 aa15.56■□□□□ 0.08
SMPD4-202ENST00000409031 ERHP84090 104 aaKnown RBP15.56■□□□□ 0.08
SMPD4-202ENST00000409031 MEF2BQ02080 365 aaPredicted RBP15.56■□□□□ 0.08
SMPD4-202ENST00000409031 NR2C2APQ86WQ0 139 aa15.56■□□□□ 0.08
SMPD4-202ENST00000409031 LANCL2Q9NS86 450 aa15.56■□□□□ 0.08
SMPD4-202ENST00000409031 NEUROG3Q9Y4Z2 214 aa15.56■□□□□ 0.08
SMPD4-202ENST00000409031 CYB5R2Q6BCY4 276 aa15.55■□□□□ 0.08
SMPD4-202ENST00000409031 GAPTQ8N292 157 aa15.55■□□□□ 0.08
SMPD4-202ENST00000409031 RBM14Q96PK6 669 aaKnown RBP15.55■□□□□ 0.08
SMPD4-202ENST00000409031 UTP23Q9BRU9 249 aaKnown RBP15.55■□□□□ 0.08
SMPD4-202ENST00000409031 SRD5A3Q9H8P0 318 aa15.55■□□□□ 0.08
SMPD4-202ENST00000409031 GALR2O43603 387 aaPredicted RBP15.55■□□□□ 0.08
SMPD4-202ENST00000409031 RPS4Y1P22090 263 aaKnown RBP15.55■□□□□ 0.08
SMPD4-202ENST00000409031 APOBEC3DQ96AK3 386 aaPredicted RBP15.55■□□□□ 0.08
SMPD4-202ENST00000409031 NRTNQ99748 197 aa15.55■□□□□ 0.08
SMPD4-202ENST00000409031 PARD6GQ9BYG4 376 aaPredicted RBP15.55■□□□□ 0.08
SMPD4-202ENST00000409031 C5orf66Q9H5L9 145 aa15.55■□□□□ 0.08
SMPD4-202ENST00000409031 SPTBP11277 2137 aa15.55■□□□□ 0.08
SMPD4-202ENST00000409031 H3BMH7 237 aa15.55■□□□□ 0.08
SMPD4-202ENST00000409031 ZXDCQ2QGD7 858 aaPredicted RBP15.55■□□□□ 0.08
SMPD4-202ENST00000409031 HIKESHIQ53FT3 197 aa15.55■□□□□ 0.08
SMPD4-202ENST00000409031 POC1AQ8NBT0 407 aa15.55■□□□□ 0.08
SMPD4-202ENST00000409031 RARRES2Q99969 163 aa15.55■□□□□ 0.08
SMPD4-202ENST00000409031 SEC16AO15027 2179 aa15.55■□□□□ 0.08
SMPD4-202ENST00000409031 PIAS2O75928 621 aa15.55■□□□□ 0.08
SMPD4-202ENST00000409031 IER3P46695 156 aa15.55■□□□□ 0.08
SMPD4-202ENST00000409031 TMEM50BP56557 158 aa15.55■□□□□ 0.08
SMPD4-202ENST00000409031 RPS16P62249 146 aaKnown RBP15.55■□□□□ 0.08
SMPD4-202ENST00000409031 NHLH1Q02575 133 aa15.55■□□□□ 0.08
SMPD4-202ENST00000409031 AGBL5Q8NDL9 886 aa15.55■□□□□ 0.08
SMPD4-202ENST00000409031 OR11L1Q8NGX0 322 aa15.55■□□□□ 0.08
SMPD4-202ENST00000409031 FOXB1Q99853 325 aa15.55■□□□□ 0.08
SMPD4-202ENST00000409031 NDUFAF3Q9BU61 184 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms