RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 PLAC9Q5JTB6 97 aa6.96□□□□□ -1.3
GPC3-203ENST00000406757 C6orf201Q7Z4U5 140 aa6.96□□□□□ -1.3
GPC3-203ENST00000406757 C5orf24Q7Z6I8 188 aa6.96□□□□□ -1.3
GPC3-203ENST00000406757 Q8IYB0 196 aa6.96□□□□□ -1.3
GPC3-203ENST00000406757 C1orf87Q8N0U7 546 aa6.96□□□□□ -1.3
GPC3-203ENST00000406757 FAM216BQ8N7L0 139 aa6.96□□□□□ -1.3
GPC3-203ENST00000406757 SUMF2Q8NBJ7 301 aa6.96□□□□□ -1.3
GPC3-203ENST00000406757 ZNRF1Q8ND25 227 aa6.96□□□□□ -1.3
GPC3-203ENST00000406757 Q8NFD4 153 aa6.96□□□□□ -1.3
GPC3-203ENST00000406757 OR10R2Q8NGX6 335 aa6.96□□□□□ -1.3
GPC3-203ENST00000406757 ANGPTL6Q8NI99 470 aa6.96□□□□□ -1.3
GPC3-203ENST00000406757 GCDHQ92947 438 aaPredicted RBP6.96□□□□□ -1.3
GPC3-203ENST00000406757 S100A16Q96FQ6 103 aaKnown RBP6.96□□□□□ -1.3
GPC3-203ENST00000406757 ARHGAP5-AS1Q96IT6 56 aa6.96□□□□□ -1.3
GPC3-203ENST00000406757 TMEM246Q9BRR3 403 aa6.96□□□□□ -1.3
GPC3-203ENST00000406757 URM1Q9BTM9 101 aaKnown RBP6.96□□□□□ -1.3
GPC3-203ENST00000406757 FAAP24Q9BTP7 215 aa6.96□□□□□ -1.3
GPC3-203ENST00000406757 TM2D1Q9BX74 207 aa6.96□□□□□ -1.3
GPC3-203ENST00000406757 PECRQ9BY49 303 aa6.96□□□□□ -1.3
GPC3-203ENST00000406757 ABCG5Q9H222 651 aa6.96□□□□□ -1.3
GPC3-203ENST00000406757 CHODLQ9H9P2 273 aa6.96□□□□□ -1.3
GPC3-203ENST00000406757 PCDHB16Q9NRJ7 776 aa6.96□□□□□ -1.3
GPC3-203ENST00000406757 RASL12Q9NYN1 266 aa6.96□□□□□ -1.3
GPC3-203ENST00000406757 FBLN5Q9UBX5 448 aa6.96□□□□□ -1.3
GPC3-203ENST00000406757 PEX16Q9Y5Y5 336 aa6.96□□□□□ -1.3
GPC3-203ENST00000406757 TANC2Q9HCD6 1990 aa6.96□□□□□ -1.3
GPC3-203ENST00000406757 MXRA5Q9NR99 2828 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 IGHV4-30-2A0A087WSY4 118 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 TRAV39A0A0B4J263 110 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 TRAV38-1A0A0B4J264 116 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 TRAV24A0A0B4J272 114 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 A0A0G2JMP0 313 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 A0A0X1KG70 313 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 METTL21EPA6NDL7 271 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 MEIS3P1A6NDR6 274 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 FABP12A6NFH5 140 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 FOXI3A8MTJ6 420 aaPredicted RBP6.95□□□□□ -1.3
GPC3-203ENST00000406757 RAB27BO00194 218 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 SH2D1BO14796 132 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 TNFRSF13BO14836 293 aaPredicted RBP6.95□□□□□ -1.3
GPC3-203ENST00000406757 ADAM20O43506 726 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 PSPNO60542 156 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 FCN3O75636 299 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 KNG1P01042 644 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 IFNA2P01563 188 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 IGHV2-70P01814 119 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 APOA1P02647 267 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 CPT2P23786 658 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 GPR6P46095 362 aaPredicted RBP6.95□□□□□ -1.3
GPC3-203ENST00000406757 PDLIM4P50479 330 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 TAS2R20P59543 309 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 DYNC1I2Q13409 638 aaKnown RBP6.95□□□□□ -1.3
GPC3-203ENST00000406757 ZNF146Q15072 292 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 CDNFQ49AH0 187 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 TEX36Q5VZQ5 186 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 STUMQ69YW2 141 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 RAB12Q6IQ22 244 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 DCDC5Q6ZRR9 648 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 Q6ZTK2 550 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 PEG10Q86TG7 708 aaKnown RBP6.95□□□□□ -1.3
GPC3-203ENST00000406757 LRRC28Q86X40 367 aaPredicted RBP6.95□□□□□ -1.3
GPC3-203ENST00000406757 SNX29P2Q8IUI4 249 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 FAM89BQ8N5H3 189 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 TPRX1Q8N7U7 411 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 ASCC1Q8N9N2 400 aaKnown RBP6.95□□□□□ -1.3
GPC3-203ENST00000406757 OR4S1Q8NGB4 309 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 OR4M2Q8NGB6 313 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 RAB1CQ92928 201 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 PTX4Q96A99 478 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 PHF21AQ96BD5 680 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 GAFA1Q96PS6 74 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 NEDD4LQ96PU5 975 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 SULT4A1Q9BR01 284 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 HDHD3Q9BSH5 251 aaPredicted RBP6.95□□□□□ -1.3
GPC3-203ENST00000406757 MRI1Q9BV20 369 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 BPESC1Q9GZL8 116 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 PPA2Q9H2U2 334 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 DIABLOQ9NR28 239 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 CTSZQ9UBR2 303 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 ZNF222Q9UK12 451 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 KCNK7Q9Y2U2 307 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 MAB21L2Q9Y586 359 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 A3GALT2U3KPV4 340 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 ATRQ13535 2644 aa6.95□□□□□ -1.3
GPC3-203ENST00000406757 MEIOCA2RUB1 952 aa6.94□□□□□ -1.3
GPC3-203ENST00000406757 TMEM235A6NFC5 223 aa6.94□□□□□ -1.3
GPC3-203ENST00000406757 CEACAM18A8MTB9 384 aa6.94□□□□□ -1.3
GPC3-203ENST00000406757 A8MV72 311 aaPredicted RBP6.94□□□□□ -1.3
GPC3-203ENST00000406757 IFNL4K9M1U5 179 aa6.94□□□□□ -1.3
GPC3-203ENST00000406757 SLC33A1O00400 549 aaPredicted RBP6.94□□□□□ -1.3
GPC3-203ENST00000406757 TMPRSS2O15393 492 aa6.94□□□□□ -1.3
GPC3-203ENST00000406757 XRCC3O43542 346 aa6.94□□□□□ -1.3
GPC3-203ENST00000406757 TMEM127O75204 238 aa6.94□□□□□ -1.3
GPC3-203ENST00000406757 HLA-DQB1P01920 261 aa6.94□□□□□ -1.3
GPC3-203ENST00000406757 CHRM2P08172 466 aa6.94□□□□□ -1.3
GPC3-203ENST00000406757 MUC1P15941 1255 aaPredicted RBP6.94□□□□□ -1.3
GPC3-203ENST00000406757 FUT3P21217 361 aa6.94□□□□□ -1.3
GPC3-203ENST00000406757 CHATP28329 748 aa6.94□□□□□ -1.3
GPC3-203ENST00000406757 SCAND1P57086 179 aa6.94□□□□□ -1.3
GPC3-203ENST00000406757 TMEM33P57088 247 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms