RNA–Protein interactions for RNA: ENST00000406477.7

PARVB-204, Transcript of parvin beta, humanhuman

TSL 1 (best) BASIC

Gene PARVB, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-204ENST00000406477 WDR86Q86TI4 376 aa13.78□□□□□ -0.2
PARVB-204ENST00000406477 SLC38A6Q8IZM9 456 aa13.78□□□□□ -0.2
PARVB-204ENST00000406477 MOB3AQ96BX8 217 aa13.78□□□□□ -0.2
PARVB-204ENST00000406477 ZNF488Q96MN9 340 aa13.78□□□□□ -0.2
PARVB-204ENST00000406477 HS3ST6Q96QI5 342 aa13.78□□□□□ -0.2
PARVB-204ENST00000406477 VRK1Q99986 396 aaPredicted RBP13.78□□□□□ -0.2
PARVB-204ENST00000406477 SYT3Q9BQG1 590 aa13.78□□□□□ -0.2
PARVB-204ENST00000406477 DPCDQ9BVM2 203 aaPredicted RBP13.78□□□□□ -0.2
PARVB-204ENST00000406477 WDR13Q9H1Z4 485 aa13.78□□□□□ -0.2
PARVB-204ENST00000406477 TINAGQ9UJW2 476 aa13.78□□□□□ -0.2
PARVB-204ENST00000406477 KCNIP3Q9Y2W7 256 aa13.78□□□□□ -0.2
PARVB-204ENST00000406477 INTS1Q8N201 2190 aaKnown RBP13.77□□□□□ -0.2
PARVB-204ENST00000406477 EEF1E1-BLOC1S5C9J1V9 151 aa13.77□□□□□ -0.21
PARVB-204ENST00000406477 M0R233 179 aa13.77□□□□□ -0.21
PARVB-204ENST00000406477 CDIPTO14735 213 aa13.77□□□□□ -0.21
PARVB-204ENST00000406477 IFNA2P01563 188 aa13.77□□□□□ -0.21
PARVB-204ENST00000406477 TK1P04183 234 aa13.77□□□□□ -0.21
PARVB-204ENST00000406477 GRPP07492 148 aa13.77□□□□□ -0.21
PARVB-204ENST00000406477 SLC25A4P12235 298 aa13.77□□□□□ -0.21
PARVB-204ENST00000406477 ZNF44P15621 663 aa13.77□□□□□ -0.21
PARVB-204ENST00000406477 RBMXP38159 391 aaKnown RBP13.77□□□□□ -0.21
PARVB-204ENST00000406477 FABP6P51161 128 aa13.77□□□□□ -0.21
PARVB-204ENST00000406477 BAMBIQ13145 260 aa13.77□□□□□ -0.21
PARVB-204ENST00000406477 ZNF146Q15072 292 aa13.77□□□□□ -0.21
PARVB-204ENST00000406477 ABCA11PQ4W5N1 156 aa13.77□□□□□ -0.21
PARVB-204ENST00000406477 Q6P435 159 aa13.77□□□□□ -0.21
PARVB-204ENST00000406477 TMEM65Q6PI78 240 aa13.77□□□□□ -0.21
PARVB-204ENST00000406477 MOB1BQ7L9L4 216 aa13.77□□□□□ -0.21
PARVB-204ENST00000406477 CCDC71LQ8N9Z2 235 aa13.77□□□□□ -0.21
PARVB-204ENST00000406477 SNRNP40Q96DI7 357 aaKnown RBP13.77□□□□□ -0.21
PARVB-204ENST00000406477 ELMOD3Q96FG2 381 aa13.77□□□□□ -0.21
PARVB-204ENST00000406477 TLNRD1Q9H1K6 362 aa13.77□□□□□ -0.21
PARVB-204ENST00000406477 C1orf123Q9NWV4 160 aa13.77□□□□□ -0.21
PARVB-204ENST00000406477 SLC23A1Q9UHI7 598 aa13.77□□□□□ -0.21
PARVB-204ENST00000406477 ATP23Q9Y6H3 246 aa13.77□□□□□ -0.21
PARVB-204ENST00000406477 FXYD6-FXYD2A0A087WZ82 144 aa13.76□□□□□ -0.21
PARVB-204ENST00000406477 TRAV24A0A0B4J272 114 aa13.76□□□□□ -0.21
PARVB-204ENST00000406477 A0A0G2JNJ9 132 aa13.76□□□□□ -0.21
PARVB-204ENST00000406477 BMP5P22003 454 aa13.76□□□□□ -0.21
PARVB-204ENST00000406477 DUSP1P28562 367 aa13.76□□□□□ -0.21
PARVB-204ENST00000406477 SLC9A3R2Q15599 337 aa13.76□□□□□ -0.21
PARVB-204ENST00000406477 FAM185AQ8N0U4 392 aa13.76□□□□□ -0.21
PARVB-204ENST00000406477 OR8H1Q8NGG4 311 aa13.76□□□□□ -0.21
PARVB-204ENST00000406477 NMES1Q9C002 83 aa13.76□□□□□ -0.21
PARVB-204ENST00000406477 FXYD6Q9H0Q3 95 aa13.76□□□□□ -0.21
PARVB-204ENST00000406477 IL36RNQ9UBH0 155 aa13.76□□□□□ -0.21
PARVB-204ENST00000406477 Q9UFV3 132 aa13.76□□□□□ -0.21
PARVB-204ENST00000406477 TEX13DA0A0J9YY54 714 aaPredicted RBP13.75□□□□□ -0.21
PARVB-204ENST00000406477 C5orf51A6NDU8 294 aa13.75□□□□□ -0.21
PARVB-204ENST00000406477 CRYM-AS1A6NIL9 109 aa13.75□□□□□ -0.21
PARVB-204ENST00000406477 FAM25EA8MYX2 175 aa13.75□□□□□ -0.21
PARVB-204ENST00000406477 H0YL77 283 aa13.75□□□□□ -0.21
PARVB-204ENST00000406477 HS3ST1O14792 307 aa13.75□□□□□ -0.21
PARVB-204ENST00000406477 MLNRO43193 412 aa13.75□□□□□ -0.21
PARVB-204ENST00000406477 KNG1P01042 644 aa13.75□□□□□ -0.21
PARVB-204ENST00000406477 ZNF250P15622 560 aa13.75□□□□□ -0.21
PARVB-204ENST00000406477 RPS2P15880 293 aaKnown RBP13.75□□□□□ -0.21
PARVB-204ENST00000406477 RPA2P15927 270 aa13.75□□□□□ -0.21
PARVB-204ENST00000406477 PI3P19957 117 aa13.75□□□□□ -0.21
PARVB-204ENST00000406477 SELENOVP59797 346 aa13.75□□□□□ -0.21
PARVB-204ENST00000406477 SUPT4H1P63272 117 aaKnown RBP13.75□□□□□ -0.21
PARVB-204ENST00000406477 SORDQ00796 357 aa13.75□□□□□ -0.21
PARVB-204ENST00000406477 OPCMLQ14982 345 aa13.75□□□□□ -0.21
PARVB-204ENST00000406477 PAN3Q58A45 887 aaKnown RBP13.75□□□□□ -0.21
PARVB-204ENST00000406477 ZNF880Q6PDB4 577 aa13.75□□□□□ -0.21
PARVB-204ENST00000406477 HES4Q9HCC6 221 aa13.75□□□□□ -0.21
PARVB-204ENST00000406477 RAXQ9Y2V3 346 aa13.75□□□□□ -0.21
PARVB-204ENST00000406477 C16orf97H3BN30 126 aa13.75□□□□□ -0.21
PARVB-204ENST00000406477 IFNA7P01567 189 aa13.75□□□□□ -0.21
PARVB-204ENST00000406477 IGHV3-13P01766 116 aa13.75□□□□□ -0.21
PARVB-204ENST00000406477 FAM87AP0C7U9 286 aa13.75□□□□□ -0.21
PARVB-204ENST00000406477 SERPINF1P36955 418 aa13.75□□□□□ -0.21
PARVB-204ENST00000406477 OR4A4PQ8NGN8 299 aa13.75□□□□□ -0.21
PARVB-204ENST00000406477 MRPL30Q8TCC3 161 aaKnown RBP13.75□□□□□ -0.21
PARVB-204ENST00000406477 RDH5Q92781 318 aa13.75□□□□□ -0.21
PARVB-204ENST00000406477 TOMM40LQ969M1 308 aa13.75□□□□□ -0.21
PARVB-204ENST00000406477 WDR89Q96FK6 387 aaPredicted RBP13.75□□□□□ -0.21
PARVB-204ENST00000406477 FAM210AQ96ND0 272 aa13.75□□□□□ -0.21
PARVB-204ENST00000406477 ASF1BQ9NVP2 202 aa13.75□□□□□ -0.21
PARVB-204ENST00000406477 PCDHB10Q9UN67 800 aa13.75□□□□□ -0.21
PARVB-204ENST00000406477 MEMO1Q9Y316 297 aa13.75□□□□□ -0.21
PARVB-204ENST00000406477 DMXL1Q9Y485 3027 aa13.74□□□□□ -0.21
PARVB-204ENST00000406477 A6NLC8 198 aa13.74□□□□□ -0.21
PARVB-204ENST00000406477 CCSO14618 274 aa13.74□□□□□ -0.21
PARVB-204ENST00000406477 ARPC5O15511 151 aa13.74□□□□□ -0.21
PARVB-204ENST00000406477 OR2H2O95918 312 aa13.74□□□□□ -0.21
PARVB-204ENST00000406477 PPYP01298 95 aa13.74□□□□□ -0.21
PARVB-204ENST00000406477 CXCL2P19875 107 aa13.74□□□□□ -0.21
PARVB-204ENST00000406477 S100A11P31949 105 aa13.74□□□□□ -0.21
PARVB-204ENST00000406477 CD200P41217 278 aa13.74□□□□□ -0.21
PARVB-204ENST00000406477 PIGPP57054 158 aa13.74□□□□□ -0.21
PARVB-204ENST00000406477 KLF3P57682 345 aaPredicted RBP13.74□□□□□ -0.21
PARVB-204ENST00000406477 NKX6-1P78426 367 aaPredicted RBP13.74□□□□□ -0.21
PARVB-204ENST00000406477 C11orf87Q6NUJ2 197 aa13.74□□□□□ -0.21
PARVB-204ENST00000406477 TEX261Q6UWH6 196 aa13.74□□□□□ -0.21
PARVB-204ENST00000406477 OR5T2Q8NGG2 359 aa13.74□□□□□ -0.21
PARVB-204ENST00000406477 THAP6Q8TBB0 222 aa13.74□□□□□ -0.21
PARVB-204ENST00000406477 GALNT14Q96FL9 552 aa13.74□□□□□ -0.21
PARVB-204ENST00000406477 RSRP1Q9BUV0 290 aa13.74□□□□□ -0.21
PARVB-204ENST00000406477 SUCNR1Q9BXA5 334 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms