RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 C9orf152Q5JTZ5 239 aa7.84□□□□□ -1.15
LIG4-202ENST00000405925 SLC35G3Q8N808 338 aa7.84□□□□□ -1.15
LIG4-202ENST00000405925 ZNF75AQ96N20 296 aa7.84□□□□□ -1.15
LIG4-202ENST00000405925 LPAR5Q9H1C0 372 aa7.84□□□□□ -1.15
LIG4-202ENST00000405925 ZDHHC11Q9H8X9 412 aa7.84□□□□□ -1.15
LIG4-202ENST00000405925 DLL4Q9NR61 685 aa7.84□□□□□ -1.15
LIG4-202ENST00000405925 SDHAF2Q9NX18 166 aa7.84□□□□□ -1.15
LIG4-202ENST00000405925 DHRS7CA6NNS2 312 aa7.84□□□□□ -1.15
LIG4-202ENST00000405925 K7ENP7 123 aa7.84□□□□□ -1.15
LIG4-202ENST00000405925 LANCL1O43813 399 aa7.84□□□□□ -1.15
LIG4-202ENST00000405925 KRASP01116 189 aa7.84□□□□□ -1.15
LIG4-202ENST00000405925 FPR2P25090 351 aa7.84□□□□□ -1.15
LIG4-202ENST00000405925 ASCL1P50553 236 aa7.84□□□□□ -1.15
LIG4-202ENST00000405925 B3GALT5-AS1P59052 145 aa7.84□□□□□ -1.15
LIG4-202ENST00000405925 RPS16P62249 146 aaKnown RBP7.84□□□□□ -1.15
LIG4-202ENST00000405925 ZNF816Q0VGE8 651 aaPredicted RBP7.84□□□□□ -1.15
LIG4-202ENST00000405925 PLA2G7Q13093 441 aa7.84□□□□□ -1.15
LIG4-202ENST00000405925 RTL8BQ17RB0 113 aa7.84□□□□□ -1.15
LIG4-202ENST00000405925 C1orf100Q5SVJ3 147 aa7.84□□□□□ -1.15
LIG4-202ENST00000405925 FAM96BQ9Y3D0 163 aa7.84□□□□□ -1.15
LIG4-202ENST00000405925 IGKV3D-15A0A087WSY6 115 aa7.84□□□□□ -1.15
LIG4-202ENST00000405925 A0A087WV48 116 aa7.84□□□□□ -1.15
LIG4-202ENST00000405925 SNRPGP15A8MWD9 76 aa7.84□□□□□ -1.15
LIG4-202ENST00000405925 AGPAT2O15120 278 aa7.84□□□□□ -1.15
LIG4-202ENST00000405925 WISP1O95388 367 aa7.84□□□□□ -1.15
LIG4-202ENST00000405925 NAT2P11245 290 aa7.84□□□□□ -1.15
LIG4-202ENST00000405925 PPP3CBP16298 524 aa7.84□□□□□ -1.15
LIG4-202ENST00000405925 NRN1LQ496H8 165 aa7.84□□□□□ -1.15
LIG4-202ENST00000405925 PDLIM3Q53GG5 364 aaPredicted RBP7.84□□□□□ -1.15
LIG4-202ENST00000405925 SUMF2Q8NBJ7 301 aa7.84□□□□□ -1.15
LIG4-202ENST00000405925 C1orf162Q8NEQ5 155 aaPredicted RBP7.84□□□□□ -1.15
LIG4-202ENST00000405925 LAMP3Q9UQV4 416 aa7.84□□□□□ -1.15
LIG4-202ENST00000405925 A0A1W2PRD5 423 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 A0A1W2PRF3 423 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 A0A1W2PRM7 423 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 ADAM10O14672 748 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 SHOXO15266 292 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 MED6O75586 246 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 GIPP09681 153 aaPredicted RBP7.83□□□□□ -1.16
LIG4-202ENST00000405925 WT1P19544 449 aaPredicted RBP7.83□□□□□ -1.16
LIG4-202ENST00000405925 ACKR3P25106 362 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 AESQ08117 197 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 OPCMLQ14982 345 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 MOGAT2Q3SYC2 334 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 Q3ZCU0 254 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 ZBTB37Q5TC79 503 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 OR8G2PQ6IF36 304 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 ZNF767PQ75MW2 155 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 CDH26Q8IXH8 852 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 SLC38A6Q8IZM9 456 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 PXT1Q8NFP0 134 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 OR13C8Q8NGS7 320 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 LRRC20Q8TCA0 184 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 SLC25A38Q96DW6 304 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 EIF5A2Q9GZV4 153 aaKnown RBP7.83□□□□□ -1.16
LIG4-202ENST00000405925 MAGT1Q9H0U3 335 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 HIPK2Q9H2X6 1198 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 CA10Q9NS85 328 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 ELOVL5Q9NYP7 299 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 PPIAL4EA0A075B759 164 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 PPIAL4DF5H284 164 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 TRAPPC2P0DI81 140 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 TRAPPC2BP0DI82 140 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 PPIAL4FP0DN26 164 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 TUBG1P23258 451 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 GLRXP35754 106 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 KCNJ3P48549 501 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 FGF12P61328 243 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 DHRS2Q13268 280 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 PPP1R1AQ13522 171 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 ALKAL2Q6UX46 152 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 HSD17B11Q8NBQ5 300 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 SCMH1Q96GD3 660 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 CNTNAP3BQ96NU0 1288 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 GAL3ST2Q9H3Q3 398 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 PPP1R3EQ9H7J1 279 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 ZNF665Q9H7R5 613 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 TUBG2Q9NRH3 451 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 FBXO7Q9Y3I1 522 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 WIPI2Q9Y4P8 454 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 PPIAL4AQ9Y536 164 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 A0A0D9SG52 128 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 hCG_38984A0A1B0GV85 526 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 A1L4Q6 167 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 CTDSPLO15194 276 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 CYB5BO43169 146 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 HLA-DQB1P01920 261 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 CD40P25942 277 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 PRDX2P32119 198 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 HBG1P69891 147 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 HBG2P69892 147 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 EFNB1P98172 346 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 ESCO2Q56NI9 601 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 MOB3BQ86TA1 216 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 ZDHHC22Q8N966 263 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 FGFBP3Q8TAT2 258 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 PTX4Q96A99 478 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 ZNF524Q96C55 264 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 MED30Q96HR3 178 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 TAAR6Q96RI8 345 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms