RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 AADACP22760 399 aa11.92□□□□□ -0.5
PRAME-205ENST00000405655 CEACAM8P31997 349 aaPredicted RBP11.92□□□□□ -0.5
PRAME-205ENST00000405655 SEC61A1P61619 476 aaKnown RBP11.92□□□□□ -0.5
PRAME-205ENST00000405655 P2RY6Q15077 328 aa11.92□□□□□ -0.5
PRAME-205ENST00000405655 ACTBL2Q562R1 376 aa11.92□□□□□ -0.5
PRAME-205ENST00000405655 TMEM200AQ86VY9 491 aa11.92□□□□□ -0.5
PRAME-205ENST00000405655 PLPPR1Q8TBJ4 325 aa11.92□□□□□ -0.5
PRAME-205ENST00000405655 PDCD10Q9BUL8 212 aa11.92□□□□□ -0.5
PRAME-205ENST00000405655 RTL8AQ9BWD3 113 aa11.92□□□□□ -0.5
PRAME-205ENST00000405655 C12orf4Q9NQ89 552 aa11.92□□□□□ -0.5
PRAME-205ENST00000405655 TREM2Q9NZC2 230 aa11.92□□□□□ -0.5
PRAME-205ENST00000405655 OR5B21A6NL26 309 aa11.92□□□□□ -0.5
PRAME-205ENST00000405655 MCRIP1C9JLW8 97 aa11.92□□□□□ -0.5
PRAME-205ENST00000405655 ATP6V1G2-DDX39BF2Z307 99 aa11.92□□□□□ -0.5
PRAME-205ENST00000405655 CA11O75493 328 aa11.92□□□□□ -0.5
PRAME-205ENST00000405655 HOXB5P09067 269 aa11.92□□□□□ -0.5
PRAME-205ENST00000405655 TIMP3P35625 211 aa11.92□□□□□ -0.5
PRAME-205ENST00000405655 KRTCAP3Q53RY4 240 aa11.92□□□□□ -0.5
PRAME-205ENST00000405655 TMEM128Q5BJH2 165 aa11.92□□□□□ -0.5
PRAME-205ENST00000405655 Q6P435 159 aa11.92□□□□□ -0.5
PRAME-205ENST00000405655 LDLRAD3Q86YD5 345 aa11.92□□□□□ -0.5
PRAME-205ENST00000405655 CCDC36Q8IYA8 594 aa11.92□□□□□ -0.5
PRAME-205ENST00000405655 PRR18Q8N4B5 295 aa11.92□□□□□ -0.5
PRAME-205ENST00000405655 C1orf162Q8NEQ5 155 aaPredicted RBP11.92□□□□□ -0.5
PRAME-205ENST00000405655 OR10C1Q96KK4 312 aa11.92□□□□□ -0.5
PRAME-205ENST00000405655 OPA3Q9H6K4 179 aa11.92□□□□□ -0.5
PRAME-205ENST00000405655 METRNQ9UJH8 293 aa11.92□□□□□ -0.5
PRAME-205ENST00000405655 C5orf51A6NDU8 294 aa11.91□□□□□ -0.5
PRAME-205ENST00000405655 J3QT63 122 aa11.91□□□□□ -0.5
PRAME-205ENST00000405655 ERVH48-1M5A8F1 160 aa11.91□□□□□ -0.5
PRAME-205ENST00000405655 IL24Q13007 206 aa11.91□□□□□ -0.5
PRAME-205ENST00000405655 RELL2Q8NC24 303 aaPredicted RBP11.91□□□□□ -0.5
PRAME-205ENST00000405655 PPP1R1CQ8WVI7 109 aa11.91□□□□□ -0.5
PRAME-205ENST00000405655 PHB2Q99623 299 aa11.91□□□□□ -0.5
PRAME-205ENST00000405655 TMEM100Q9NV29 134 aa11.91□□□□□ -0.5
PRAME-205ENST00000405655 RCC2Q9P258 522 aaKnown RBP11.91□□□□□ -0.5
PRAME-205ENST00000405655 TACC2O95359 2948 aa11.91□□□□□ -0.5
PRAME-205ENST00000405655 A6NLC8 198 aa11.91□□□□□ -0.5
PRAME-205ENST00000405655 A8MXE2 369 aa11.91□□□□□ -0.5
PRAME-205ENST00000405655 C1QTNF9BB2RNN3 333 aa11.91□□□□□ -0.5
PRAME-205ENST00000405655 RRP8O43159 456 aaKnown RBP11.91□□□□□ -0.5
PRAME-205ENST00000405655 NXPH2O95156 264 aa11.91□□□□□ -0.5
PRAME-205ENST00000405655 SFT2D2O95562 160 aa11.91□□□□□ -0.5
PRAME-205ENST00000405655 DUS4LO95620 317 aaKnown RBP11.91□□□□□ -0.5
PRAME-205ENST00000405655 OR2H2O95918 312 aa11.91□□□□□ -0.5
PRAME-205ENST00000405655 C1QTNF9P0C862 333 aa11.91□□□□□ -0.5
PRAME-205ENST00000405655 S100A1P23297 94 aa11.91□□□□□ -0.5
PRAME-205ENST00000405655 DTYMKP23919 212 aa11.91□□□□□ -0.5
PRAME-205ENST00000405655 DHODHQ02127 395 aa11.91□□□□□ -0.5
PRAME-205ENST00000405655 ZMYND11Q15326 602 aa11.91□□□□□ -0.5
PRAME-205ENST00000405655 FAM76BQ5HYJ3 339 aa11.91□□□□□ -0.5
PRAME-205ENST00000405655 SAXO1Q8IYX7 474 aa11.91□□□□□ -0.5
PRAME-205ENST00000405655 BOLLQ8N9W6 283 aaKnown RBP11.91□□□□□ -0.5
PRAME-205ENST00000405655 TMEM185AQ8NFB2 350 aa11.91□□□□□ -0.5
PRAME-205ENST00000405655 OR8G5Q8NG78 346 aa11.91□□□□□ -0.5
PRAME-205ENST00000405655 MRPL30Q8TCC3 161 aaKnown RBP11.91□□□□□ -0.5
PRAME-205ENST00000405655 ARPC5LQ9BPX5 153 aa11.91□□□□□ -0.5
PRAME-205ENST00000405655 USB1Q9BQ65 265 aaKnown RBP11.91□□□□□ -0.5
PRAME-205ENST00000405655 ZNF286AQ9HBT8 521 aa11.91□□□□□ -0.5
PRAME-205ENST00000405655 Q9N2K0 584 aa11.91□□□□□ -0.5
PRAME-205ENST00000405655 NECAP2Q9NVZ3 263 aa11.91□□□□□ -0.5
PRAME-205ENST00000405655 IGKV1D-13A0A0B4J2D9 117 aa11.9□□□□□ -0.5
PRAME-205ENST00000405655 DBX1A6NMT0 343 aa11.9□□□□□ -0.5
PRAME-205ENST00000405655 CEACAM18A8MTB9 384 aa11.9□□□□□ -0.5
PRAME-205ENST00000405655 DEGS1O15121 323 aa11.9□□□□□ -0.5
PRAME-205ENST00000405655 NAPSAO96009 420 aa11.9□□□□□ -0.5
PRAME-205ENST00000405655 IGKV1-13P0DP09 117 aa11.9□□□□□ -0.5
PRAME-205ENST00000405655 OPCMLQ14982 345 aa11.9□□□□□ -0.5
PRAME-205ENST00000405655 PPA1Q15181 289 aa11.9□□□□□ -0.5
PRAME-205ENST00000405655 OR2Z1Q8NG97 314 aa11.9□□□□□ -0.5
PRAME-205ENST00000405655 GON7Q9BXV9 100 aa11.9□□□□□ -0.5
PRAME-205ENST00000405655 DSCAMO60469 2012 aa11.9□□□□□ -0.5
PRAME-205ENST00000405655 LRP5LA4QPB2 252 aa11.89□□□□□ -0.51
PRAME-205ENST00000405655 L7N2F9 121 aa11.89□□□□□ -0.51
PRAME-205ENST00000405655 DLL1O00548 723 aa11.89□□□□□ -0.51
PRAME-205ENST00000405655 PRRG2O14669 202 aa11.89□□□□□ -0.51
PRAME-205ENST00000405655 PIGPP57054 158 aa11.89□□□□□ -0.51
PRAME-205ENST00000405655 ERVK11-1P61568 191 aa11.89□□□□□ -0.51
PRAME-205ENST00000405655 ARL6IP1Q15041 203 aa11.89□□□□□ -0.51
PRAME-205ENST00000405655 FAM201AQ5SY85 155 aa11.89□□□□□ -0.51
PRAME-205ENST00000405655 TEX261Q6UWH6 196 aa11.89□□□□□ -0.51
PRAME-205ENST00000405655 DHRS11Q6UWP2 260 aa11.89□□□□□ -0.51
PRAME-205ENST00000405655 TGIF2LYQ8IUE0 185 aa11.89□□□□□ -0.51
PRAME-205ENST00000405655 TPRX1Q8N7U7 411 aa11.89□□□□□ -0.51
PRAME-205ENST00000405655 ZNF680Q8NEM1 530 aa11.89□□□□□ -0.51
PRAME-205ENST00000405655 TRAF4Q9BUZ4 470 aaPredicted RBP11.89□□□□□ -0.51
PRAME-205ENST00000405655 PARP12Q9H0J9 701 aaKnown RBP11.89□□□□□ -0.51
PRAME-205ENST00000405655 ESRP2Q9H6T0 727 aaKnown RBP11.89□□□□□ -0.51
PRAME-205ENST00000405655 U3KQ87 197 aa11.89□□□□□ -0.51
PRAME-205ENST00000405655 HRNRQ86YZ3 2850 aaPredicted RBP11.89□□□□□ -0.51
PRAME-205ENST00000405655 ZSCAN5BA6NJL1 495 aa11.89□□□□□ -0.51
PRAME-205ENST00000405655 SLC33A1O00400 549 aaPredicted RBP11.89□□□□□ -0.51
PRAME-205ENST00000405655 PSPNO60542 156 aa11.89□□□□□ -0.51
PRAME-205ENST00000405655 PGA5P0DJD9 388 aa11.89□□□□□ -0.51
PRAME-205ENST00000405655 ZNF728P0DKX0 622 aa11.89□□□□□ -0.51
PRAME-205ENST00000405655 TMEM211Q6ICI0 200 aa11.89□□□□□ -0.51
PRAME-205ENST00000405655 TMUB2Q71RG4 321 aa11.89□□□□□ -0.51
PRAME-205ENST00000405655 FOXRED2Q8IWF2 684 aa11.89□□□□□ -0.51
PRAME-205ENST00000405655 ZCCHC24Q8N2G6 241 aaKnown RBP11.89□□□□□ -0.51
PRAME-205ENST00000405655 NRIP2Q9BQI9 281 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms