RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 ZNF695Q8IW36 515 aa10.34□□□□□ -0.75
RBM39-206ENST00000403542 HPSE2Q8WWQ2 592 aa10.34□□□□□ -0.75
RBM39-206ENST00000403542 ZNF488Q96MN9 340 aa10.34□□□□□ -0.75
RBM39-206ENST00000403542 SLC35B3Q9H1N7 401 aa10.34□□□□□ -0.75
RBM39-206ENST00000403542 MIOXQ9UGB7 285 aa10.34□□□□□ -0.75
RBM39-206ENST00000403542 PATE3B3GLJ2 98 aa10.34□□□□□ -0.75
RBM39-206ENST00000403542 RRP8O43159 456 aaKnown RBP10.34□□□□□ -0.75
RBM39-206ENST00000403542 OR2C1O95371 312 aa10.34□□□□□ -0.75
RBM39-206ENST00000403542 OR8U8P0C7N1 319 aa10.34□□□□□ -0.75
RBM39-206ENST00000403542 CRYGSP22914 178 aa10.34□□□□□ -0.75
RBM39-206ENST00000403542 OTX2P32243 289 aa10.34□□□□□ -0.75
RBM39-206ENST00000403542 DSCR4P56555 118 aaPredicted RBP10.34□□□□□ -0.75
RBM39-206ENST00000403542 MRPL14Q6P1L8 145 aaKnown RBP10.34□□□□□ -0.75
RBM39-206ENST00000403542 TBC1D26Q86UD7 250 aa10.34□□□□□ -0.75
RBM39-206ENST00000403542 GAPTQ8N292 157 aa10.34□□□□□ -0.75
RBM39-206ENST00000403542 ZNF561Q8N587 486 aa10.34□□□□□ -0.75
RBM39-206ENST00000403542 OR2C3Q8N628 320 aa10.34□□□□□ -0.75
RBM39-206ENST00000403542 SPSB1Q96BD6 273 aa10.34□□□□□ -0.75
RBM39-206ENST00000403542 C18orf12Q96KH6 178 aa10.34□□□□□ -0.75
RBM39-206ENST00000403542 BCO1Q9HAY6 547 aa10.34□□□□□ -0.75
RBM39-206ENST00000403542 DOCK10Q96BY6 2186 aa10.33□□□□□ -0.76
RBM39-206ENST00000403542 IGHV1-45A0A0A0MS14 117 aa10.33□□□□□ -0.76
RBM39-206ENST00000403542 IGKV1D-13A0A0B4J2D9 117 aa10.33□□□□□ -0.76
RBM39-206ENST00000403542 CLN5O75503 358 aa10.33□□□□□ -0.76
RBM39-206ENST00000403542 SEC11BP0C7V7 166 aa10.33□□□□□ -0.76
RBM39-206ENST00000403542 IGKV1-13P0DP09 117 aa10.33□□□□□ -0.76
RBM39-206ENST00000403542 NKX2-1P43699 371 aaPredicted RBP10.33□□□□□ -0.76
RBM39-206ENST00000403542 HAAOP46952 286 aa10.33□□□□□ -0.76
RBM39-206ENST00000403542 GPM6AP51674 278 aa10.33□□□□□ -0.76
RBM39-206ENST00000403542 ZNF154Q13106 437 aa10.33□□□□□ -0.76
RBM39-206ENST00000403542 ARL6IP1Q15041 203 aa10.33□□□□□ -0.76
RBM39-206ENST00000403542 HLA-BQ31612 363 aa10.33□□□□□ -0.76
RBM39-206ENST00000403542 DNASE2BQ8WZ79 361 aa10.33□□□□□ -0.76
RBM39-206ENST00000403542 FOXB1Q99853 325 aa10.33□□□□□ -0.76
RBM39-206ENST00000403542 SYT3Q9BQG1 590 aa10.33□□□□□ -0.76
RBM39-206ENST00000403542 BCL2L14Q9BZR8 327 aa10.33□□□□□ -0.76
RBM39-206ENST00000403542 PRR14LQ5THK1 2151 aa10.33□□□□□ -0.76
RBM39-206ENST00000403542 H7C1Q1 480 aa10.33□□□□□ -0.76
RBM39-206ENST00000403542 MPPED1O15442 326 aa10.33□□□□□ -0.76
RBM39-206ENST00000403542 TMEM50AO95807 157 aa10.33□□□□□ -0.76
RBM39-206ENST00000403542 KLK3P07288 261 aaPredicted RBP10.33□□□□□ -0.76
RBM39-206ENST00000403542 COX6A1P12074 109 aa10.33□□□□□ -0.76
RBM39-206ENST00000403542 NR2C1P13056 603 aa10.33□□□□□ -0.76
RBM39-206ENST00000403542 BCL3P20749 454 aa10.33□□□□□ -0.76
RBM39-206ENST00000403542 EPHA8P29322 1005 aaPredicted RBP10.33□□□□□ -0.76
RBM39-206ENST00000403542 FOXG1P55316 489 aaPredicted RBP10.33□□□□□ -0.76
RBM39-206ENST00000403542 MRPS34P82930 218 aaKnown RBP10.33□□□□□ -0.76
RBM39-206ENST00000403542 RAB35Q15286 201 aa10.33□□□□□ -0.76
RBM39-206ENST00000403542 ACER2Q5QJU3 275 aa10.33□□□□□ -0.76
RBM39-206ENST00000403542 ZNF818PQ6ZRF7 136 aa10.33□□□□□ -0.76
RBM39-206ENST00000403542 OR51H1Q8NH63 302 aa10.33□□□□□ -0.76
RBM39-206ENST00000403542 TCEAL3Q969E4 200 aa10.33□□□□□ -0.76
RBM39-206ENST00000403542 BOD1Q96IK1 185 aa10.33□□□□□ -0.76
RBM39-206ENST00000403542 GINS3Q9BRX5 216 aa10.33□□□□□ -0.76
RBM39-206ENST00000403542 GLRX2Q9NS18 164 aa10.33□□□□□ -0.76
RBM39-206ENST00000403542 TMEM38BQ9NVV0 291 aa10.33□□□□□ -0.76
RBM39-206ENST00000403542 TERTO14746 1132 aaKnown RBP10.32□□□□□ -0.76
RBM39-206ENST00000403542 HS3ST1O14792 307 aa10.32□□□□□ -0.76
RBM39-206ENST00000403542 PDCD6O75340 191 aa10.32□□□□□ -0.76
RBM39-206ENST00000403542 EDN3P14138 238 aa10.32□□□□□ -0.76
RBM39-206ENST00000403542 DYNLT3P51808 116 aa10.32□□□□□ -0.76
RBM39-206ENST00000403542 RPS23P62266 143 aaKnown RBP10.32□□□□□ -0.76
RBM39-206ENST00000403542 FAM209BQ5JX69 171 aa10.32□□□□□ -0.76
RBM39-206ENST00000403542 CPEB3Q8NE35 698 aaKnown RBP10.32□□□□□ -0.76
RBM39-206ENST00000403542 IL1F10Q8WWZ1 152 aa10.32□□□□□ -0.76
RBM39-206ENST00000403542 EXTL1Q92935 676 aa10.32□□□□□ -0.76
RBM39-206ENST00000403542 WNT5BQ9H1J7 359 aa10.32□□□□□ -0.76
RBM39-206ENST00000403542 RNF122Q9H9V4 155 aa10.32□□□□□ -0.76
RBM39-206ENST00000403542 KLF7O75840 302 aaPredicted RBP10.32□□□□□ -0.76
RBM39-206ENST00000403542 HLA-HP01893 362 aa10.32□□□□□ -0.76
RBM39-206ENST00000403542 CXCL12P48061 93 aa10.32□□□□□ -0.76
RBM39-206ENST00000403542 VAMP2P63027 116 aa10.32□□□□□ -0.76
RBM39-206ENST00000403542 ZNF239Q16600 458 aaKnown RBP10.32□□□□□ -0.76
RBM39-206ENST00000403542 CDPF1Q6NVV7 123 aa10.32□□□□□ -0.76
RBM39-206ENST00000403542 OR10D3Q8NH80 312 aa10.32□□□□□ -0.76
RBM39-206ENST00000403542 LYPD6BQ8NI32 183 aa10.32□□□□□ -0.76
RBM39-206ENST00000403542 IFI44Q8TCB0 444 aa10.32□□□□□ -0.76
RBM39-206ENST00000403542 MOB3AQ96BX8 217 aa10.32□□□□□ -0.76
RBM39-206ENST00000403542 GALNT14Q96FL9 552 aa10.32□□□□□ -0.76
RBM39-206ENST00000403542 SUCNR1Q9BXA5 334 aa10.32□□□□□ -0.76
RBM39-206ENST00000403542 CCL28Q9NRJ3 127 aa10.32□□□□□ -0.76
RBM39-206ENST00000403542 MRPS17Q9Y2R5 130 aaKnown RBP10.32□□□□□ -0.76
RBM39-206ENST00000403542 LOC102725191A0A1B0GVB3 256 aa10.32□□□□□ -0.76
RBM39-206ENST00000403542 VAMP5O95183 116 aa10.32□□□□□ -0.76
RBM39-206ENST00000403542 AGAP20933 346 aa10.32□□□□□ -0.76
RBM39-206ENST00000403542 MDKP21741 143 aaPredicted RBP10.32□□□□□ -0.76
RBM39-206ENST00000403542 ECI1P42126 302 aa10.32□□□□□ -0.76
RBM39-206ENST00000403542 RBM11P57052 281 aaKnown RBP10.32□□□□□ -0.76
RBM39-206ENST00000403542 RND3P61587 244 aa10.32□□□□□ -0.76
RBM39-206ENST00000403542 RAC1P63000 192 aa10.32□□□□□ -0.76
RBM39-206ENST00000403542 HIST1H3AP68431 136 aa10.32□□□□□ -0.76
RBM39-206ENST00000403542 HIST2H3PS2Q5TEC6 136 aa10.32□□□□□ -0.76
RBM39-206ENST00000403542 RTL6Q6ICC9 239 aa10.32□□□□□ -0.76
RBM39-206ENST00000403542 LHFPL2Q6ZUX7 228 aa10.32□□□□□ -0.76
RBM39-206ENST00000403542 HIST2H3AQ71DI3 136 aa10.32□□□□□ -0.76
RBM39-206ENST00000403542 CYB561D1Q8N8Q1 229 aa10.32□□□□□ -0.76
RBM39-206ENST00000403542 OR56B2PQ8NGI1 322 aa10.32□□□□□ -0.76
RBM39-206ENST00000403542 OR1J1Q8NGS3 322 aa10.32□□□□□ -0.76
RBM39-206ENST00000403542 RDH5Q92781 318 aa10.32□□□□□ -0.76
RBM39-206ENST00000403542 SMG1Q96Q15 3661 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms