RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 IGKV1D-17A0A075B6S4 117 aa2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 KIR2DS1A0A191URI9 304 aa2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 A0A1W2PRG6 482 aa2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 ZNF233A6NK53 670 aa2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 KLRC4-KLRK1H3BQV0 150 aa2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 UPK1AO00322 258 aa2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 COCHO43405 550 aa2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 ADAP1O75689 374 aa2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 IGKV1-17P01599 117 aa2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 OR4Q2P0C623 313 aa2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 OR5AC1P0C628 307 aa2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 MPV17P39210 176 aa2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 IDH2P48735 452 aaKnown RBP2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 TGM4P49221 684 aa2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 TTPAP49638 278 aa2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 RHOAP61586 193 aa2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 MEF2CQ06413 473 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 EXOC3L4Q17RC7 722 aa2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 CEACAM21Q3KPI0 293 aa2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 NIPAL1Q6NVV3 410 aa2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 ZNF773Q6PK81 442 aa2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 FAM151BQ6UXP7 276 aa2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 FAM231DQ6ZW35 169 aa2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 RNF10Q8N5U6 811 aaKnown RBP2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 DNAAF3Q8N9W5 541 aa2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 ZFP62Q8NB50 900 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 ACBD4Q8NC06 268 aa2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 ACTL9Q8TC94 416 aa2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 DYNC2LI1Q8TCX1 351 aa2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 ZNF721Q8TF20 911 aa2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 DNAJB3Q8WWF6 145 aa2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 PPWD1Q96BP3 646 aaKnown RBP2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 HBEGFQ99075 208 aa2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 SEC22CQ9BRL7 303 aa2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 RTBDNQ9BSG5 229 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 ZNF426Q9BUY5 554 aa2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 PARP11Q9NR21 331 aa2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 RBM22Q9NW64 420 aaKnown RBP eCLIP2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 TAS2R13Q9NYV9 303 aa2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 TMEM131Q92545 1883 aa2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 BAZ2AQ9UIF9 1905 aaKnown RBP2.07□□□□□ -2.08
HMGB1P17-201ENST00000403495 ADAMTSL3P82987 1691 aa2.06□□□□□ -2.08
HMGB1P17-201ENST00000403495 IZUMO1RA6ND01 250 aa2.06□□□□□ -2.08
HMGB1P17-201ENST00000403495 C9J4A7 227 aa2.06□□□□□ -2.08
HMGB1P17-201ENST00000403495 H3BP45 60 aa2.06□□□□□ -2.08
HMGB1P17-201ENST00000403495 J3QLI3 93 aa2.06□□□□□ -2.08
HMGB1P17-201ENST00000403495 ISLRO14498 428 aa2.06□□□□□ -2.08
HMGB1P17-201ENST00000403495 MPZL2O60487 215 aa2.06□□□□□ -2.08
HMGB1P17-201ENST00000403495 IGLV3-19P01714 112 aa2.06□□□□□ -2.08
HMGB1P17-201ENST00000403495 ORM1P02763 201 aa2.06□□□□□ -2.08
HMGB1P17-201ENST00000403495 ZNF35P13682 527 aa2.06□□□□□ -2.08
HMGB1P17-201ENST00000403495 PVALBP20472 110 aaPredicted RBP2.06□□□□□ -2.08
HMGB1P17-201ENST00000403495 PSMB9P28065 219 aa2.06□□□□□ -2.08
HMGB1P17-201ENST00000403495 CDC34P49427 236 aaPredicted RBP2.06□□□□□ -2.08
HMGB1P17-201ENST00000403495 RAB8AP61006 207 aa2.06□□□□□ -2.08
HMGB1P17-201ENST00000403495 FMODQ06828 376 aa2.06□□□□□ -2.08
HMGB1P17-201ENST00000403495 BAXQ07812 192 aa2.06□□□□□ -2.08
HMGB1P17-201ENST00000403495 IL15RAQ13261 267 aa2.06□□□□□ -2.08
HMGB1P17-201ENST00000403495 SSX1Q16384 188 aa2.06□□□□□ -2.08
HMGB1P17-201ENST00000403495 ZNF404Q494X3 552 aa2.06□□□□□ -2.08
HMGB1P17-201ENST00000403495 CDKL4Q5MAI5 379 aa2.06□□□□□ -2.08
HMGB1P17-201ENST00000403495 TIMM23BQ5SRD1 257 aa2.06□□□□□ -2.08
HMGB1P17-201ENST00000403495 SDHAF4Q5VUM1 108 aa2.06□□□□□ -2.08
HMGB1P17-201ENST00000403495 SPINT4Q6UDR6 99 aa2.06□□□□□ -2.08
HMGB1P17-201ENST00000403495 CLEC18BQ6UXF7 455 aa2.06□□□□□ -2.08
HMGB1P17-201ENST00000403495 FA2HQ7L5A8 372 aa2.06□□□□□ -2.08
HMGB1P17-201ENST00000403495 LINC00596Q86U02 117 aa2.06□□□□□ -2.08
HMGB1P17-201ENST00000403495 C10orf107Q8IVU9 208 aa2.06□□□□□ -2.08
HMGB1P17-201ENST00000403495 ZNF555Q8NEP9 628 aa2.06□□□□□ -2.08
HMGB1P17-201ENST00000403495 LFNGQ8NES3 379 aa2.06□□□□□ -2.08
HMGB1P17-201ENST00000403495 FAM45AQ8TCE6 357 aa2.06□□□□□ -2.08
HMGB1P17-201ENST00000403495 CCL17Q92583 94 aa2.06□□□□□ -2.08
HMGB1P17-201ENST00000403495 MRAP2Q96G30 205 aa2.06□□□□□ -2.08
HMGB1P17-201ENST00000403495 TMEM56Q96MV1 263 aa2.06□□□□□ -2.08
HMGB1P17-201ENST00000403495 LINC01587Q99440 93 aa2.06□□□□□ -2.08
HMGB1P17-201ENST00000403495 APOL4Q9BPW4 351 aa2.06□□□□□ -2.08
HMGB1P17-201ENST00000403495 SHANK2-AS3Q9BTD1 123 aa2.06□□□□□ -2.08
HMGB1P17-201ENST00000403495 LHX5Q9H2C1 402 aa2.06□□□□□ -2.08
HMGB1P17-201ENST00000403495 VSIRQ9H7M9 311 aa2.06□□□□□ -2.08
HMGB1P17-201ENST00000403495 SDHAF3Q9NRP4 125 aa2.06□□□□□ -2.08
HMGB1P17-201ENST00000403495 NAGKQ9UJ70 344 aa2.06□□□□□ -2.08
HMGB1P17-201ENST00000403495 OR2AT4A6NND4 320 aa2.05□□□□□ -2.08
HMGB1P17-201ENST00000403495 GOLGA8KD6RF30 607 aa2.05□□□□□ -2.08
HMGB1P17-201ENST00000403495 FTCDNL1E5RQL4 147 aa2.05□□□□□ -2.08
HMGB1P17-201ENST00000403495 GOLGA8MH3BSY2 632 aa2.05□□□□□ -2.08
HMGB1P17-201ENST00000403495 UPK2O00526 184 aa2.05□□□□□ -2.08
HMGB1P17-201ENST00000403495 PSIP1O75475 530 aaKnown RBP2.05□□□□□ -2.08
HMGB1P17-201ENST00000403495 KRTAP5-8O75690 187 aa2.05□□□□□ -2.08
HMGB1P17-201ENST00000403495 IGHV1-46P01743 117 aa2.05□□□□□ -2.08
HMGB1P17-201ENST00000403495 SLC6A1P30531 599 aa2.05□□□□□ -2.08
HMGB1P17-201ENST00000403495 TSPOP30536 169 aa2.05□□□□□ -2.08
HMGB1P17-201ENST00000403495 MPIP34949 423 aa2.05□□□□□ -2.08
HMGB1P17-201ENST00000403495 STC1P52823 247 aa2.05□□□□□ -2.08
HMGB1P17-201ENST00000403495 BLVRAP53004 296 aa2.05□□□□□ -2.08
HMGB1P17-201ENST00000403495 SLC18A1P54219 525 aa2.05□□□□□ -2.08
HMGB1P17-201ENST00000403495 MYL6P60660 151 aa2.05□□□□□ -2.08
HMGB1P17-201ENST00000403495 BNIP2Q12982 314 aa2.05□□□□□ -2.08
HMGB1P17-201ENST00000403495 LINC00303Q3SY05 128 aa2.05□□□□□ -2.08
HMGB1P17-201ENST00000403495 Q499Y3 187 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms