RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 Q8NFD4 153 aa11.5□□□□□ -0.57
HLA-DQB1-202ENST00000399079 OR51T1Q8NGJ9 327 aa11.5□□□□□ -0.57
HLA-DQB1-202ENST00000399079 CHIAQ9BZP6 476 aa11.5□□□□□ -0.57
HLA-DQB1-202ENST00000399079 FOXJ3Q9UPW0 622 aa11.5□□□□□ -0.57
HLA-DQB1-202ENST00000399079 ANK2Q01484 3957 aa11.49□□□□□ -0.57
HLA-DQB1-202ENST00000399079 A0A1W2PP11 408 aa11.49□□□□□ -0.57
HLA-DQB1-202ENST00000399079 hCG_1809904A0A1W2PP81 198 aa11.49□□□□□ -0.57
HLA-DQB1-202ENST00000399079 A0A1W2PPE2 198 aa11.49□□□□□ -0.57
HLA-DQB1-202ENST00000399079 A0A1W2PR64 198 aa11.49□□□□□ -0.57
HLA-DQB1-202ENST00000399079 A0A1W2PRV1 198 aa11.49□□□□□ -0.57
HLA-DQB1-202ENST00000399079 hADV38S2A0JD32 116 aa11.49□□□□□ -0.57
HLA-DQB1-202ENST00000399079 C17orf98A8MV24 154 aa11.49□□□□□ -0.57
HLA-DQB1-202ENST00000399079 IGHV4-59P01825 116 aa11.49□□□□□ -0.57
HLA-DQB1-202ENST00000399079 SERPINA2P20848 420 aa11.49□□□□□ -0.57
HLA-DQB1-202ENST00000399079 COX7A1P24310 79 aa11.49□□□□□ -0.57
HLA-DQB1-202ENST00000399079 PAX6P26367 422 aa11.49□□□□□ -0.57
HLA-DQB1-202ENST00000399079 BMXP51813 675 aa11.49□□□□□ -0.57
HLA-DQB1-202ENST00000399079 GP2P55259 537 aaKnown RBP11.49□□□□□ -0.57
HLA-DQB1-202ENST00000399079 MEF2CQ06413 473 aaPredicted RBP11.49□□□□□ -0.57
HLA-DQB1-202ENST00000399079 ATXN7L3Q14CW9 347 aaPredicted RBP11.49□□□□□ -0.57
HLA-DQB1-202ENST00000399079 RBM48Q5RL73 367 aaKnown RBP11.49□□□□□ -0.57
HLA-DQB1-202ENST00000399079 JAGN1Q8N5M9 183 aa11.49□□□□□ -0.57
HLA-DQB1-202ENST00000399079 MS4A15Q8N5U1 240 aa11.49□□□□□ -0.57
HLA-DQB1-202ENST00000399079 PPP1R35Q8TAP8 253 aa11.49□□□□□ -0.57
HLA-DQB1-202ENST00000399079 TMEM203Q969S6 136 aa11.49□□□□□ -0.57
HLA-DQB1-202ENST00000399079 ZNF714Q96N38 554 aa11.49□□□□□ -0.57
HLA-DQB1-202ENST00000399079 S100A13Q99584 98 aa11.49□□□□□ -0.57
HLA-DQB1-202ENST00000399079 METTL9Q9H1A3 318 aa11.49□□□□□ -0.57
HLA-DQB1-202ENST00000399079 PPIL3Q9H2H8 161 aaKnown RBP11.49□□□□□ -0.57
HLA-DQB1-202ENST00000399079 HEXA-AS1Q9H8Q6 139 aa11.49□□□□□ -0.57
HLA-DQB1-202ENST00000399079 ST3GAL6Q9Y274 331 aa11.49□□□□□ -0.57
HLA-DQB1-202ENST00000399079 SF3B6Q9Y3B4 125 aaKnown RBP11.49□□□□□ -0.57
HLA-DQB1-202ENST00000399079 LINC00312Q9Y6C7 94 aa11.49□□□□□ -0.57
HLA-DQB1-202ENST00000399079 DSCAML1Q8TD84 2053 aa11.49□□□□□ -0.57
HLA-DQB1-202ENST00000399079 TRAV24A0A0B4J272 114 aa11.48□□□□□ -0.57
HLA-DQB1-202ENST00000399079 TMEM89A2RUT3 159 aa11.48□□□□□ -0.57
HLA-DQB1-202ENST00000399079 CSTBP04080 98 aaKnown RBP11.48□□□□□ -0.57
HLA-DQB1-202ENST00000399079 MAPK3P27361 379 aaPredicted RBP11.48□□□□□ -0.57
HLA-DQB1-202ENST00000399079 ERP29P30040 261 aaKnown RBP11.48□□□□□ -0.57
HLA-DQB1-202ENST00000399079 IER3P46695 156 aa11.48□□□□□ -0.57
HLA-DQB1-202ENST00000399079 P2RX3P56373 397 aa11.48□□□□□ -0.57
HLA-DQB1-202ENST00000399079 SLC22A6Q4U2R8 563 aa11.48□□□□□ -0.57
HLA-DQB1-202ENST00000399079 C16orf87Q6PH81 154 aa11.48□□□□□ -0.57
HLA-DQB1-202ENST00000399079 UNQ9370/PRO34162Q6UXP9 181 aa11.48□□□□□ -0.57
HLA-DQB1-202ENST00000399079 TRAPPC6BQ86SZ2 158 aa11.48□□□□□ -0.57
HLA-DQB1-202ENST00000399079 CHST4Q8NCG5 386 aa11.48□□□□□ -0.57
HLA-DQB1-202ENST00000399079 SSMEM1Q8WWF3 244 aa11.48□□□□□ -0.57
HLA-DQB1-202ENST00000399079 MUL1Q969V5 352 aa11.48□□□□□ -0.57
HLA-DQB1-202ENST00000399079 COQ2Q96H96 371 aa11.48□□□□□ -0.57
HLA-DQB1-202ENST00000399079 AJUBAQ96IF1 538 aa11.48□□□□□ -0.57
HLA-DQB1-202ENST00000399079 ZMAT3Q9HA38 289 aaKnown RBP11.48□□□□□ -0.57
HLA-DQB1-202ENST00000399079 GEMIN2O14893 280 aaKnown RBP11.47□□□□□ -0.57
HLA-DQB1-202ENST00000399079 SC5DO75845 299 aa11.47□□□□□ -0.57
HLA-DQB1-202ENST00000399079 MMP23AO75900 390 aa11.47□□□□□ -0.57
HLA-DQB1-202ENST00000399079 FBP1P09467 338 aa11.47□□□□□ -0.57
HLA-DQB1-202ENST00000399079 IGHV1-8P0DP01 117 aa11.47□□□□□ -0.57
HLA-DQB1-202ENST00000399079 GPR50Q13585 617 aa11.47□□□□□ -0.57
HLA-DQB1-202ENST00000399079 KRBOX4Q5JUW0 171 aa11.47□□□□□ -0.57
HLA-DQB1-202ENST00000399079 CEACAM19Q7Z692 300 aa11.47□□□□□ -0.57
HLA-DQB1-202ENST00000399079 LYPD6Q86Y78 171 aa11.47□□□□□ -0.57
HLA-DQB1-202ENST00000399079 OSR2Q8N2R0 312 aa11.47□□□□□ -0.57
HLA-DQB1-202ENST00000399079 OR4D6Q8NGJ1 314 aa11.47□□□□□ -0.57
HLA-DQB1-202ENST00000399079 UFD1Q92890 307 aa11.47□□□□□ -0.57
HLA-DQB1-202ENST00000399079 IL36GQ9NZH8 169 aa11.47□□□□□ -0.57
HLA-DQB1-202ENST00000399079 ZNRD1Q9P1U0 126 aa11.47□□□□□ -0.57
HLA-DQB1-202ENST00000399079 MRPS28Q9Y2Q9 187 aaKnown RBP11.47□□□□□ -0.57
HLA-DQB1-202ENST00000399079 KIAA2026Q5HYC2 2103 aa11.47□□□□□ -0.57
HLA-DQB1-202ENST00000399079 FAM181BA6NEQ2 426 aa11.46□□□□□ -0.57
HLA-DQB1-202ENST00000399079 DENRO43583 198 aaKnown RBP11.46□□□□□ -0.57
HLA-DQB1-202ENST00000399079 PAHP00439 452 aa11.46□□□□□ -0.57
HLA-DQB1-202ENST00000399079 CSN2P05814 226 aa11.46□□□□□ -0.57
HLA-DQB1-202ENST00000399079 HKR1P10072 659 aa11.46□□□□□ -0.57
HLA-DQB1-202ENST00000399079 RBM11P57052 281 aaKnown RBP11.46□□□□□ -0.57
HLA-DQB1-202ENST00000399079 RPS25P62851 125 aaKnown RBP11.46□□□□□ -0.57
HLA-DQB1-202ENST00000399079 TPBGQ13641 420 aa11.46□□□□□ -0.57
HLA-DQB1-202ENST00000399079 IL13RA2Q14627 380 aa11.46□□□□□ -0.57
HLA-DQB1-202ENST00000399079 PAN3Q58A45 887 aaKnown RBP11.46□□□□□ -0.57
HLA-DQB1-202ENST00000399079 AWAT2Q6E213 333 aa11.46□□□□□ -0.57
HLA-DQB1-202ENST00000399079 GLIPR1L1Q6UWM5 242 aa11.46□□□□□ -0.57
HLA-DQB1-202ENST00000399079 C12orf54Q6X4T0 127 aa11.46□□□□□ -0.57
HLA-DQB1-202ENST00000399079 LDLRAD3Q86YD5 345 aa11.46□□□□□ -0.57
HLA-DQB1-202ENST00000399079 MGLLQ99685 303 aa11.46□□□□□ -0.57
HLA-DQB1-202ENST00000399079 TCF7L1Q9HCS4 588 aa11.46□□□□□ -0.57
HLA-DQB1-202ENST00000399079 BLOC1S6Q9UL45 172 aa11.46□□□□□ -0.57
HLA-DQB1-202ENST00000399079 POMT1Q9Y6A1 747 aa11.46□□□□□ -0.57
HLA-DQB1-202ENST00000399079 ODAMA1E959 279 aa11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 OR7C1O76099 320 aaPredicted RBP11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 RBP4P02753 201 aa11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 OMGP23515 440 aa11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 MLLT11Q13015 90 aaPredicted RBP11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 TAF9Q16594 264 aa11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 MIDNQ504T8 468 aa11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 BRICD5Q6PL45 260 aa11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 BAIAP2L2Q6UXY1 529 aa11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 TMEM91Q6ZNR0 172 aa11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 LHFPL4Q7Z7J7 247 aa11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 LRRTM1Q86UE6 522 aa11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 TMEM86BQ8N661 226 aa11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 PLPPR1Q8TBJ4 325 aa11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 THRSPQ92748 146 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms