RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 C12orf4Q9NQ89 552 aa16.35■□□□□ 0.21
PDLIM2-205ENST00000397761 TREM2Q9NZC2 230 aa16.35■□□□□ 0.21
PDLIM2-205ENST00000397761 NLKQ9UBE8 527 aa16.35■□□□□ 0.21
PDLIM2-205ENST00000397761 GLS2Q9UI32 602 aa16.35■□□□□ 0.21
PDLIM2-205ENST00000397761 POM121CA8CG34 1229 aa16.35■□□□□ 0.21
PDLIM2-205ENST00000397761 ZNF736B4DX44 427 aaPredicted RBP16.35■□□□□ 0.21
PDLIM2-205ENST00000397761 MT-ND4P03905 459 aa16.35■□□□□ 0.21
PDLIM2-205ENST00000397761 CD3DP04234 171 aa16.35■□□□□ 0.21
PDLIM2-205ENST00000397761 SOD3P08294 240 aa16.35■□□□□ 0.21
PDLIM2-205ENST00000397761 ZNF44P15621 663 aa16.35■□□□□ 0.21
PDLIM2-205ENST00000397761 FAUP35544 74 aaKnown RBP16.35■□□□□ 0.21
PDLIM2-205ENST00000397761 RBMXP38159 391 aaKnown RBP16.35■□□□□ 0.21
PDLIM2-205ENST00000397761 TEX36Q5VZQ5 186 aa16.35■□□□□ 0.21
PDLIM2-205ENST00000397761 STEAP1BQ6NZ63 245 aa16.35■□□□□ 0.21
PDLIM2-205ENST00000397761 Q6ZPA2 131 aa16.35■□□□□ 0.21
PDLIM2-205ENST00000397761 GAPTQ8N292 157 aa16.35■□□□□ 0.21
PDLIM2-205ENST00000397761 DYRK2Q92630 601 aa16.35■□□□□ 0.21
PDLIM2-205ENST00000397761 RDH5Q92781 318 aa16.35■□□□□ 0.21
PDLIM2-205ENST00000397761 TRAF4Q9BUZ4 470 aaPredicted RBP16.35■□□□□ 0.21
PDLIM2-205ENST00000397761 ZNF222Q9UK12 451 aa16.35■□□□□ 0.21
PDLIM2-205ENST00000397761 EDARQ9UNE0 448 aa16.35■□□□□ 0.21
PDLIM2-205ENST00000397761 WIPI2Q9Y4P8 454 aa16.35■□□□□ 0.21
PDLIM2-205ENST00000397761 KIAA2026Q5HYC2 2103 aa16.34■□□□□ 0.21
PDLIM2-205ENST00000397761 IGKV1D-17A0A075B6S4 117 aa16.34■□□□□ 0.21
PDLIM2-205ENST00000397761 TRBV6-6A0A0A6YYG2 114 aa16.34■□□□□ 0.21
PDLIM2-205ENST00000397761 RFPL4AA6NLU0 287 aa16.34■□□□□ 0.21
PDLIM2-205ENST00000397761 LRRC30A6NM36 301 aa16.34■□□□□ 0.21
PDLIM2-205ENST00000397761 OR2AT4A6NND4 320 aa16.34■□□□□ 0.21
PDLIM2-205ENST00000397761 RFPL4AL1F8VTS6 287 aa16.34■□□□□ 0.21
PDLIM2-205ENST00000397761 FCGR3AP08637 254 aa16.34■□□□□ 0.21
PDLIM2-205ENST00000397761 PSG2P11465 335 aa16.34■□□□□ 0.21
PDLIM2-205ENST00000397761 MDH2P40926 338 aaKnown RBP16.34■□□□□ 0.21
PDLIM2-205ENST00000397761 SRSF7Q16629 238 aaKnown RBP eCLIP16.34■□□□□ 0.21
PDLIM2-205ENST00000397761 Q6ZS49 121 aa16.34■□□□□ 0.21
PDLIM2-205ENST00000397761 TGIF2LYQ8IUE0 185 aa16.34■□□□□ 0.21
PDLIM2-205ENST00000397761 OR4S1Q8NGB4 309 aa16.34■□□□□ 0.21
PDLIM2-205ENST00000397761 ENKURQ8TC29 256 aa16.34■□□□□ 0.21
PDLIM2-205ENST00000397761 RIMS4Q9H426 269 aaPredicted RBP16.34■□□□□ 0.21
PDLIM2-205ENST00000397761 FAM240BA0A1B0GVZ2 78 aa16.33■□□□□ 0.2
PDLIM2-205ENST00000397761 SIRPB1O00241 398 aa16.33■□□□□ 0.2
PDLIM2-205ENST00000397761 HPXP02790 462 aa16.33■□□□□ 0.2
PDLIM2-205ENST00000397761 MUC1P15941 1255 aaPredicted RBP16.33■□□□□ 0.2
PDLIM2-205ENST00000397761 HLA-DMAP28067 261 aa16.33■□□□□ 0.2
PDLIM2-205ENST00000397761 MRPS15P82914 257 aaKnown RBP16.33■□□□□ 0.2
PDLIM2-205ENST00000397761 PAX5Q02548 391 aa16.33■□□□□ 0.2
PDLIM2-205ENST00000397761 PAN3Q58A45 887 aaKnown RBP16.33■□□□□ 0.2
PDLIM2-205ENST00000397761 OR52W1Q6IF63 320 aa16.33■□□□□ 0.2
PDLIM2-205ENST00000397761 CD177Q8N6Q3 437 aa16.33■□□□□ 0.2
PDLIM2-205ENST00000397761 BEST4Q8NFU0 473 aa16.33■□□□□ 0.2
PDLIM2-205ENST00000397761 OR4D10Q8NGI6 311 aa16.33■□□□□ 0.2
PDLIM2-205ENST00000397761 ANGPTL6Q8NI99 470 aa16.33■□□□□ 0.2
PDLIM2-205ENST00000397761 COPZ2Q9P299 210 aa16.33■□□□□ 0.2
PDLIM2-205ENST00000397761 OR14J1Q9UGF5 321 aa16.33■□□□□ 0.2
PDLIM2-205ENST00000397761 ZNF230Q9UIE0 474 aaPredicted RBP16.33■□□□□ 0.2
PDLIM2-205ENST00000397761 A0A1B0GVG6 124 aa16.32■□□□□ 0.2
PDLIM2-205ENST00000397761 TMEM178BH3BS89 294 aa16.32■□□□□ 0.2
PDLIM2-205ENST00000397761 PSPNO60542 156 aa16.32■□□□□ 0.2
PDLIM2-205ENST00000397761 ZNF737O75373 536 aa16.32■□□□□ 0.2
PDLIM2-205ENST00000397761 RAB3DO95716 219 aa16.32■□□□□ 0.2
PDLIM2-205ENST00000397761 CYB5R3P00387 301 aaPredicted RBP16.32■□□□□ 0.2
PDLIM2-205ENST00000397761 ZNF735P0CB33 412 aa16.32■□□□□ 0.2
PDLIM2-205ENST00000397761 IRF2P14316 349 aa16.32■□□□□ 0.2
PDLIM2-205ENST00000397761 PRDX2P32119 198 aa16.32■□□□□ 0.2
PDLIM2-205ENST00000397761 KCNJ3P48549 501 aa16.32■□□□□ 0.2
PDLIM2-205ENST00000397761 CEBPDP49716 269 aaPredicted RBP16.32■□□□□ 0.2
PDLIM2-205ENST00000397761 MEF2DQ14814 521 aa16.32■□□□□ 0.2
PDLIM2-205ENST00000397761 ACTBL2Q562R1 376 aa16.32■□□□□ 0.2
PDLIM2-205ENST00000397761 C1orf87Q8N0U7 546 aa16.32■□□□□ 0.2
PDLIM2-205ENST00000397761 BPIFB2Q8N4F0 458 aa16.32■□□□□ 0.2
PDLIM2-205ENST00000397761 CACNG6Q9BXT2 260 aa16.32■□□□□ 0.2
PDLIM2-205ENST00000397761 TMEM106BQ9NUM4 274 aa16.32■□□□□ 0.2
PDLIM2-205ENST00000397761 DCAF16Q9NXF7 216 aa16.32■□□□□ 0.2
PDLIM2-205ENST00000397761 DNAJB11Q9UBS4 358 aa16.32■□□□□ 0.2
PDLIM2-205ENST00000397761 IGKV1D-8A0A087WSZ0 117 aa16.31■□□□□ 0.2
PDLIM2-205ENST00000397761 IGHV1-69-2A0A0G2JMI3 117 aa16.31■□□□□ 0.2
PDLIM2-205ENST00000397761 CLDN1O95832 211 aa16.31■□□□□ 0.2
PDLIM2-205ENST00000397761 FCER2P06734 321 aa16.31■□□□□ 0.2
PDLIM2-205ENST00000397761 GIFP27352 417 aa16.31■□□□□ 0.2
PDLIM2-205ENST00000397761 CD80P33681 288 aa16.31■□□□□ 0.2
PDLIM2-205ENST00000397761 MICBQ29980 383 aa16.31■□□□□ 0.2
PDLIM2-205ENST00000397761 VAX1Q5SQQ9 334 aa16.31■□□□□ 0.2
PDLIM2-205ENST00000397761 STUMQ69YW2 141 aa16.31■□□□□ 0.2
PDLIM2-205ENST00000397761 FAAP20Q6NZ36 180 aa16.31■□□□□ 0.2
PDLIM2-205ENST00000397761 ZNF880Q6PDB4 577 aa16.31■□□□□ 0.2
PDLIM2-205ENST00000397761 C17orf107Q6ZR85 190 aa16.31■□□□□ 0.2
PDLIM2-205ENST00000397761 OR4K15Q8NH41 348 aa16.31■□□□□ 0.2
PDLIM2-205ENST00000397761 MRPL30Q8TCC3 161 aaKnown RBP16.31■□□□□ 0.2
PDLIM2-205ENST00000397761 ST6GALNAC5Q9BVH7 336 aa16.31■□□□□ 0.2
PDLIM2-205ENST00000397761 TINAGL1Q9GZM7 467 aaPredicted RBP16.31■□□□□ 0.2
PDLIM2-205ENST00000397761 DPAGT1Q9H3H5 408 aa16.31■□□□□ 0.2
PDLIM2-205ENST00000397761 TMEM165Q9HC07 324 aa16.31■□□□□ 0.2
PDLIM2-205ENST00000397761 ZNF701Q9NV72 531 aaPredicted RBP16.31■□□□□ 0.2
PDLIM2-205ENST00000397761 ETAA1Q9NY74 926 aa16.31■□□□□ 0.2
PDLIM2-205ENST00000397761 DOCK11Q5JSL3 2073 aa16.31■□□□□ 0.2
PDLIM2-205ENST00000397761 TMEM82A0PJX8 343 aa16.3■□□□□ 0.2
PDLIM2-205ENST00000397761 OOEPA6NGQ2 149 aa16.3■□□□□ 0.2
PDLIM2-205ENST00000397761 FSTL3O95633 263 aa16.3■□□□□ 0.2
PDLIM2-205ENST00000397761 CSN2P05814 226 aa16.3■□□□□ 0.2
PDLIM2-205ENST00000397761 HRH1P35367 487 aa16.3■□□□□ 0.2
PDLIM2-205ENST00000397761 TAS2R46P59540 309 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms