RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 A0A1B0GU03 582 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 BCL2L11O43521 198 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 MPC2O95563 127 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 Q8TCH9 128 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 ABHD3Q8WU67 409 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 NAA60Q9H7X0 242 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 TNFSF11O14788 317 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 DFFBO76075 338 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 CHRNB4P30926 498 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 HCCSP53701 268 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 IFITM2Q01629 132 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 CORO6Q6QEF8 472 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 FJX1Q86VR8 437 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 GNPNAT1Q96EK6 184 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-206ENST00000397617 OR51I2Q9H344 312 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 LDAHQ9H6V9 325 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 POU2F3Q9UKI9 436 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 PROCRQ9UNN8 238 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 GCN1Q92616 2671 aaKnown RBP5.04□□□□□ -1.6
PTPRD-206ENST00000397617 DSPP15924 2871 aaKnown RBP5.04□□□□□ -1.6
PTPRD-206ENST00000397617 C9orf170A2RU37 121 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 GMFGO60234 142 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 KNG1P01042 644 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 IL34Q6ZMJ4 242 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 LIAT1Q6ZQX7 453 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 OR56B2PQ8NGI1 322 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 ZNF251Q9BRH9 671 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 ZNF835Q9Y2P0 537 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 WSB1Q9Y6I7 421 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 SSX5O60225 188 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 NCR1O76036 304 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 FCGR3AP08637 254 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 CATR1Q13166 79 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 ZNF546Q86UE3 836 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 TCEAL3Q969E4 200 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 ARHGAP5-AS1Q96IT6 56 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 RDH8Q9NYR8 311 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 ZDHHC8Q9ULC8 765 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 CBY1Q9Y3M2 126 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 CRYM-AS1A6NIL9 109 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 SLC33A1O00400 549 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-206ENST00000397617 PRRG2O14669 202 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 RBP4P02753 201 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 HRH1P35367 487 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 EFNB2P52799 333 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 SLC25A26Q70HW3 274 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 C1orf87Q8N0U7 546 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 TMEM222Q9H0R3 208 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 TMEM100Q9NV29 134 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 TRDCB7Z8K6 153 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 PPYP01298 95 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 SPNP16150 400 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 KIR2DL2P43627 348 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-206ENST00000397617 TCF15Q12870 199 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 PRDX4Q13162 271 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 POU2AF1Q16633 256 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 ELMOD3Q96FG2 381 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 ZNF845Q96IR2 970 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-206ENST00000397617 PARD6AQ9NPB6 346 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 TRAV1-1A0A0B4J248 108 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 KANTRA0A1W2PQU2 76 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 E9PLN8 166 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 SHOXO15266 292 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 CYB5BO43169 146 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 MPZL1O95297 269 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 ZNF35P13682 527 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 MAGEA5P43359 124 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 CD83Q01151 205 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 INPP5JQ15735 1006 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-206ENST00000397617 TUSC5Q8IXB3 177 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 FAM57AQ8TBR7 257 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 SIGLEC12Q96PQ1 595 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 VKORC1Q9BQB6 163 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 RSRP1Q9BUV0 290 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 PAPOLGQ9BWT3 736 aaKnown RBP5.03□□□□□ -1.6
PTPRD-206ENST00000397617 KCNIP1Q9NZI2 227 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 RPS10-NUDT3A0A1W2PQS6 291 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 MGST3O14880 152 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 MT-ND4P03905 459 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 OR8U8P0C7N1 319 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 ZNF728P0DKX0 622 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 ABOP16442 354 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 CRIP3Q6Q6R5 217 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 ZNF66Q6ZN08 573 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 ZNF808Q8N4W9 903 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-206ENST00000397617 SLC25A31Q9H0C2 315 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 LIN7CQ9NUP9 197 aaKnown RBP5.03□□□□□ -1.6
PTPRD-206ENST00000397617 KAAG1Q9UBP8 84 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 LOC100509620A0A075B734 347 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 FNDC10F2Z333 226 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 HSPA12AO43301 675 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 ADAM5Q6NVV9 412 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 OR11H7Q8NGC8 314 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 RNF141Q8WVD5 230 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 PINX1Q96BK5 328 aaKnown RBP5.03□□□□□ -1.6
PTPRD-206ENST00000397617 OR2W1Q9Y3N9 320 aa5.03□□□□□ -1.6
PTPRD-206ENST00000397617 A0A0C4DFX4 3053 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 TRAV6A0A075B6T7 132 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 A0A1B0GW64 132 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 OR7C1O76099 320 aaPredicted RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms