RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 ALKBH6Q3KRA9 238 aa9.01□□□□□ -0.97
CPSF1P1-201ENST00000397477 CTRB2Q6GPI1 263 aa9.01□□□□□ -0.97
CPSF1P1-201ENST00000397477 SVBPQ8N300 66 aa9.01□□□□□ -0.97
CPSF1P1-201ENST00000397477 TRIB1Q96RU8 372 aa9.01□□□□□ -0.97
CPSF1P1-201ENST00000397477 LIME1Q9H400 295 aa9.01□□□□□ -0.97
CPSF1P1-201ENST00000397477 FAM86C1Q9NVL1 165 aa9.01□□□□□ -0.97
CPSF1P1-201ENST00000397477 CRIM1Q9NZV1 1036 aa9.01□□□□□ -0.97
CPSF1P1-201ENST00000397477 TRAPPC2LQ9UL33 140 aa9.01□□□□□ -0.97
CPSF1P1-201ENST00000397477 SPAARA0A1B0GVQ0 90 aa9.01□□□□□ -0.97
CPSF1P1-201ENST00000397477 CD300LBA8K4G0 201 aa9.01□□□□□ -0.97
CPSF1P1-201ENST00000397477 ST8SIA3O43173 380 aa9.01□□□□□ -0.97
CPSF1P1-201ENST00000397477 CRYGSP22914 178 aa9.01□□□□□ -0.97
CPSF1P1-201ENST00000397477 NFYBP25208 207 aa9.01□□□□□ -0.97
CPSF1P1-201ENST00000397477 CHATP28329 748 aa9.01□□□□□ -0.97
CPSF1P1-201ENST00000397477 S100GP29377 79 aa9.01□□□□□ -0.97
CPSF1P1-201ENST00000397477 ZNF345Q14585 488 aa9.01□□□□□ -0.97
CPSF1P1-201ENST00000397477 BEND4Q6ZU67 534 aa9.01□□□□□ -0.97
CPSF1P1-201ENST00000397477 ERGIC1Q969X5 290 aa9.01□□□□□ -0.97
CPSF1P1-201ENST00000397477 BSCL2Q96G97 398 aaPredicted RBP9.01□□□□□ -0.97
CPSF1P1-201ENST00000397477 AKR1E2Q96JD6 320 aa9.01□□□□□ -0.97
CPSF1P1-201ENST00000397477 CCL28Q9NRJ3 127 aa9.01□□□□□ -0.97
CPSF1P1-201ENST00000397477 hCG_38984A0A1B0GV85 526 aa9.01□□□□□ -0.97
CPSF1P1-201ENST00000397477 A8MXK9 166 aa9.01□□□□□ -0.97
CPSF1P1-201ENST00000397477 PPYP01298 95 aa9.01□□□□□ -0.97
CPSF1P1-201ENST00000397477 CTSDP07339 412 aaPredicted RBP9.01□□□□□ -0.97
CPSF1P1-201ENST00000397477 OR13C7P0DN81 318 aa9.01□□□□□ -0.97
CPSF1P1-201ENST00000397477 ZNF708P17019 499 aa9.01□□□□□ -0.97
CPSF1P1-201ENST00000397477 RBM11P57052 281 aaKnown RBP9.01□□□□□ -0.97
CPSF1P1-201ENST00000397477 KRBOX4Q5JUW0 171 aa9.01□□□□□ -0.97
CPSF1P1-201ENST00000397477 VHLLQ6RSH7 139 aa9.01□□□□□ -0.97
CPSF1P1-201ENST00000397477 CMTM1Q8IZ96 169 aa9.01□□□□□ -0.97
CPSF1P1-201ENST00000397477 FAM89BQ8N5H3 189 aa9.01□□□□□ -0.97
CPSF1P1-201ENST00000397477 ZC3H10Q96K80 434 aaKnown RBP9.01□□□□□ -0.97
CPSF1P1-201ENST00000397477 SHARPINQ9H0F6 387 aa9.01□□□□□ -0.97
CPSF1P1-201ENST00000397477 AMDHD2Q9Y303 409 aa9.01□□□□□ -0.97
CPSF1P1-201ENST00000397477 TMEM218A2RU14 115 aa9□□□□□ -0.97
CPSF1P1-201ENST00000397477 SLC22A20A6NK97 555 aa9□□□□□ -0.97
CPSF1P1-201ENST00000397477 EIF3GO75821 320 aaKnown RBP eCLIP9□□□□□ -0.97
CPSF1P1-201ENST00000397477 TUSC2O75896 110 aa9□□□□□ -0.97
CPSF1P1-201ENST00000397477 NXPH2O95156 264 aa9□□□□□ -0.97
CPSF1P1-201ENST00000397477 FABP6P51161 128 aa9□□□□□ -0.97
CPSF1P1-201ENST00000397477 SRSF6Q13247 344 aaKnown RBP9□□□□□ -0.97
CPSF1P1-201ENST00000397477 GAPTQ8N292 157 aa9□□□□□ -0.97
CPSF1P1-201ENST00000397477 SLC35G3Q8N808 338 aa9□□□□□ -0.97
CPSF1P1-201ENST00000397477 DEFB124Q8NES8 71 aa9□□□□□ -0.97
CPSF1P1-201ENST00000397477 ASB13Q8WXK3 278 aa9□□□□□ -0.97
CPSF1P1-201ENST00000397477 MYOZ1Q9NP98 299 aaPredicted RBP9□□□□□ -0.97
CPSF1P1-201ENST00000397477 EDARQ9UNE0 448 aa9□□□□□ -0.97
CPSF1P1-201ENST00000397477 NKX2-6A6NCS4 301 aa9□□□□□ -0.97
CPSF1P1-201ENST00000397477 DEGS1O15121 323 aa9□□□□□ -0.97
CPSF1P1-201ENST00000397477 NKX2-8O15522 239 aa9□□□□□ -0.97
CPSF1P1-201ENST00000397477 CYTIPO60759 359 aa9□□□□□ -0.97
CPSF1P1-201ENST00000397477 LILRA1O75019 489 aa9□□□□□ -0.97
CPSF1P1-201ENST00000397477 AGFG2O95081 481 aa9□□□□□ -0.97
CPSF1P1-201ENST00000397477 MBPP02686 304 aaPredicted RBP9□□□□□ -0.97
CPSF1P1-201ENST00000397477 SP9P0CG40 484 aa9□□□□□ -0.97
CPSF1P1-201ENST00000397477 NKX2-1P43699 371 aaPredicted RBP9□□□□□ -0.97
CPSF1P1-201ENST00000397477 ZFP62Q8NB50 900 aaPredicted RBP9□□□□□ -0.97
CPSF1P1-201ENST00000397477 POC1AQ8NBT0 407 aa9□□□□□ -0.97
CPSF1P1-201ENST00000397477 RNF138Q8WVD3 245 aa9□□□□□ -0.97
CPSF1P1-201ENST00000397477 APOBEC3DQ96AK3 386 aaPredicted RBP9□□□□□ -0.97
CPSF1P1-201ENST00000397477 FER1L6-AS2Q96M78 137 aa9□□□□□ -0.97
CPSF1P1-201ENST00000397477 TLNRD1Q9H1K6 362 aa9□□□□□ -0.97
CPSF1P1-201ENST00000397477 ZNF703Q9H7S9 590 aaPredicted RBP9□□□□□ -0.97
CPSF1P1-201ENST00000397477 ERRFI1Q9UJM3 462 aaPredicted RBP9□□□□□ -0.97
CPSF1P1-201ENST00000397477 LHX6Q9UPM6 363 aa9□□□□□ -0.97
CPSF1P1-201ENST00000397477 TRGV5A0A0B4J1U4 118 aa9□□□□□ -0.97
CPSF1P1-201ENST00000397477 ADAM20O43506 726 aa9□□□□□ -0.97
CPSF1P1-201ENST00000397477 IGHV3-13P01766 116 aa9□□□□□ -0.97
CPSF1P1-201ENST00000397477 IGHV3-7P01780 117 aa9□□□□□ -0.97
CPSF1P1-201ENST00000397477 DAOP14920 347 aa9□□□□□ -0.97
CPSF1P1-201ENST00000397477 LPAR6P43657 344 aa9□□□□□ -0.97
CPSF1P1-201ENST00000397477 ERVS71-1P61550 626 aa9□□□□□ -0.97
CPSF1P1-201ENST00000397477 HOXA4Q00056 320 aaPredicted RBP9□□□□□ -0.97
CPSF1P1-201ENST00000397477 TBC1D26Q86UD7 250 aa9□□□□□ -0.97
CPSF1P1-201ENST00000397477 PUSL1Q8N0Z8 303 aaKnown RBP9□□□□□ -0.97
CPSF1P1-201ENST00000397477 RGCCQ9H4X1 137 aa9□□□□□ -0.97
CPSF1P1-201ENST00000397477 RFNGQ9Y644 331 aa9□□□□□ -0.97
CPSF1P1-201ENST00000397477 ACP1P24666 158 aa8.99□□□□□ -0.97
CPSF1P1-201ENST00000397477 CTSSP25774 331 aa8.99□□□□□ -0.97
CPSF1P1-201ENST00000397477 ZNF766Q5HY98 468 aa8.99□□□□□ -0.97
CPSF1P1-201ENST00000397477 ZNF808Q8N4W9 903 aaPredicted RBP8.99□□□□□ -0.97
CPSF1P1-201ENST00000397477 FBLN5Q9UBX5 448 aa8.99□□□□□ -0.97
CPSF1P1-201ENST00000397477 C3orf85A0A1B0GTC6 90 aa8.99□□□□□ -0.97
CPSF1P1-201ENST00000397477 ZNF503-AS2A6NEH8 195 aa8.99□□□□□ -0.97
CPSF1P1-201ENST00000397477 CDIPTO14735 213 aa8.99□□□□□ -0.97
CPSF1P1-201ENST00000397477 RHBDL1O75783 438 aa8.99□□□□□ -0.97
CPSF1P1-201ENST00000397477 ATG12O94817 140 aa8.99□□□□□ -0.97
CPSF1P1-201ENST00000397477 SP1P08047 785 aa8.99□□□□□ -0.97
CPSF1P1-201ENST00000397477 HKR1P10072 659 aa8.99□□□□□ -0.97
CPSF1P1-201ENST00000397477 IAPPP10997 89 aa8.99□□□□□ -0.97
CPSF1P1-201ENST00000397477 CEBPDP49716 269 aaPredicted RBP8.99□□□□□ -0.97
CPSF1P1-201ENST00000397477 SOX8P57073 446 aa8.99□□□□□ -0.97
CPSF1P1-201ENST00000397477 FOXO1Q12778 655 aa8.99□□□□□ -0.97
CPSF1P1-201ENST00000397477 ZNF273Q14593 569 aa8.99□□□□□ -0.97
CPSF1P1-201ENST00000397477 MIDNQ504T8 468 aa8.99□□□□□ -0.97
CPSF1P1-201ENST00000397477 MDP1Q86V88 176 aa8.99□□□□□ -0.97
CPSF1P1-201ENST00000397477 SLC30A7Q8NEW0 376 aa8.99□□□□□ -0.97
CPSF1P1-201ENST00000397477 OR8U1Q8NH10 309 aa8.99□□□□□ -0.97
CPSF1P1-201ENST00000397477 KIRREL1Q96J84 757 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms