RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 LGALS14Q8TCE9 139 aa11.31□□□□□ -0.6
SEC13-205ENST00000397101 EMG1Q92979 244 aaKnown RBP11.31□□□□□ -0.6
SEC13-205ENST00000397101 DACT3Q96B18 629 aaPredicted RBP11.31□□□□□ -0.6
SEC13-205ENST00000397101 PHF21AQ96BD5 680 aa11.31□□□□□ -0.6
SEC13-205ENST00000397101 KCNK15Q9H427 330 aa11.31□□□□□ -0.6
SEC13-205ENST00000397101 BANF2Q9H503 90 aa11.31□□□□□ -0.6
SEC13-205ENST00000397101 GCM1Q9NP62 436 aa11.31□□□□□ -0.6
SEC13-205ENST00000397101 MTCH1Q9NZJ7 389 aa11.31□□□□□ -0.6
SEC13-205ENST00000397101 C1RLQ9NZP8 487 aa11.31□□□□□ -0.6
SEC13-205ENST00000397101 DNAJB11Q9UBS4 358 aa11.31□□□□□ -0.6
SEC13-205ENST00000397101 DNAH3Q8TD57 4116 aa11.3□□□□□ -0.6
SEC13-205ENST00000397101 IGKV1-12A0A0C4DH73 117 aa11.3□□□□□ -0.6
SEC13-205ENST00000397101 TMEM272A0A1B0GTI8 110 aa11.3□□□□□ -0.6
SEC13-205ENST00000397101 IFNL4K9M1U5 179 aa11.3□□□□□ -0.6
SEC13-205ENST00000397101 CYB5R3P00387 301 aaPredicted RBP11.3□□□□□ -0.6
SEC13-205ENST00000397101 IGKV1D-12P01611 117 aa11.3□□□□□ -0.6
SEC13-205ENST00000397101 CD37P11049 281 aa11.3□□□□□ -0.6
SEC13-205ENST00000397101 GTF2F2P13984 249 aa11.3□□□□□ -0.6
SEC13-205ENST00000397101 PRKACAP17612 351 aa11.3□□□□□ -0.6
SEC13-205ENST00000397101 MPZP25189 248 aa11.3□□□□□ -0.6
SEC13-205ENST00000397101 S100A5P33763 92 aa11.3□□□□□ -0.6
SEC13-205ENST00000397101 MDH2P40926 338 aaKnown RBP11.3□□□□□ -0.6
SEC13-205ENST00000397101 NPBWR2P48146 333 aa11.3□□□□□ -0.6
SEC13-205ENST00000397101 OR10K2Q6IF99 312 aa11.3□□□□□ -0.6
SEC13-205ENST00000397101 CRIP3Q6Q6R5 217 aa11.3□□□□□ -0.6
SEC13-205ENST00000397101 WDR82Q6UXN9 313 aa11.3□□□□□ -0.6
SEC13-205ENST00000397101 LYPD6Q86Y78 171 aa11.3□□□□□ -0.6
SEC13-205ENST00000397101 C11orf53Q8IXP5 236 aa11.3□□□□□ -0.6
SEC13-205ENST00000397101 Q8IYB0 196 aa11.3□□□□□ -0.6
SEC13-205ENST00000397101 OSR2Q8N2R0 312 aa11.3□□□□□ -0.6
SEC13-205ENST00000397101 SAMD12Q8N8I0 201 aa11.3□□□□□ -0.6
SEC13-205ENST00000397101 POC1AQ8NBT0 407 aa11.3□□□□□ -0.6
SEC13-205ENST00000397101 OR5H6Q8NGV6 325 aa11.3□□□□□ -0.6
SEC13-205ENST00000397101 OR10Z1Q8NGY1 313 aa11.3□□□□□ -0.6
SEC13-205ENST00000397101 URM1Q9BTM9 101 aaKnown RBP11.3□□□□□ -0.6
SEC13-205ENST00000397101 SELENOIQ9C0D9 397 aa11.3□□□□□ -0.6
SEC13-205ENST00000397101 SLIRPQ9GZT3 109 aaKnown RBP11.3□□□□□ -0.6
SEC13-205ENST00000397101 TLNRD1Q9H1K6 362 aa11.3□□□□□ -0.6
SEC13-205ENST00000397101 DCAF16Q9NXF7 216 aa11.3□□□□□ -0.6
SEC13-205ENST00000397101 PTTG2Q9NZH5 202 aa11.3□□□□□ -0.6
SEC13-205ENST00000397101 ADAM30Q9UKF2 790 aa11.3□□□□□ -0.6
SEC13-205ENST00000397101 RAB22AQ9UL26 194 aa11.3□□□□□ -0.6
SEC13-205ENST00000397101 SPATA2Q9UM82 520 aa11.3□□□□□ -0.6
SEC13-205ENST00000397101 IGHV2-70DA0A0C4DH43 119 aa11.29□□□□□ -0.6
SEC13-205ENST00000397101 CLPXO76031 633 aa11.29□□□□□ -0.6
SEC13-205ENST00000397101 FSTL3O95633 263 aa11.29□□□□□ -0.6
SEC13-205ENST00000397101 PTBP3O95758 552 aaKnown RBP11.29□□□□□ -0.6
SEC13-205ENST00000397101 WNT2P09544 360 aa11.29□□□□□ -0.6
SEC13-205ENST00000397101 PGA5P0DJD9 388 aa11.29□□□□□ -0.6
SEC13-205ENST00000397101 VSIG8P0DPA2 414 aa11.29□□□□□ -0.6
SEC13-205ENST00000397101 PMELP40967 661 aa11.29□□□□□ -0.6
SEC13-205ENST00000397101 BMXP51813 675 aa11.29□□□□□ -0.6
SEC13-205ENST00000397101 RELBQ01201 579 aa11.29□□□□□ -0.6
SEC13-205ENST00000397101 ZMYND11Q15326 602 aa11.29□□□□□ -0.6
SEC13-205ENST00000397101 Q6YL49 198 aa11.29□□□□□ -0.6
SEC13-205ENST00000397101 OR2W3Q7Z3T1 314 aa11.29□□□□□ -0.6
SEC13-205ENST00000397101 FAM58AQ8N1B3 248 aa11.29□□□□□ -0.6
SEC13-205ENST00000397101 OR51T1Q8NGJ9 327 aa11.29□□□□□ -0.6
SEC13-205ENST00000397101 RAB40AQ8WXH6 277 aa11.29□□□□□ -0.6
SEC13-205ENST00000397101 SSBP3Q9BWW4 388 aaPredicted RBP11.29□□□□□ -0.6
SEC13-205ENST00000397101 TMEM59Q9BXS4 323 aa11.29□□□□□ -0.6
SEC13-205ENST00000397101 ATG5Q9H1Y0 275 aa11.29□□□□□ -0.6
SEC13-205ENST00000397101 RBFOX1Q9NWB1 397 aaKnown RBP11.29□□□□□ -0.6
SEC13-205ENST00000397101 GLS2Q9UI32 602 aa11.29□□□□□ -0.6
SEC13-205ENST00000397101 ETV7Q9Y603 341 aa11.29□□□□□ -0.6
SEC13-205ENST00000397101 POMT1Q9Y6A1 747 aa11.29□□□□□ -0.6
SEC13-205ENST00000397101 A0A075B6Q4 140 aa11.28□□□□□ -0.6
SEC13-205ENST00000397101 TRAV40A0A0B4J280 105 aa11.28□□□□□ -0.6
SEC13-205ENST00000397101 A0A1W2PP11 408 aa11.28□□□□□ -0.6
SEC13-205ENST00000397101 METTL21EPA6NDL7 271 aa11.28□□□□□ -0.6
SEC13-205ENST00000397101 CEACAM18A8MTB9 384 aa11.28□□□□□ -0.6
SEC13-205ENST00000397101 CTDSP2O14595 271 aa11.28□□□□□ -0.6
SEC13-205ENST00000397101 HPGDSO60760 199 aa11.28□□□□□ -0.6
SEC13-205ENST00000397101 ZNF205O95201 554 aa11.28□□□□□ -0.6
SEC13-205ENST00000397101 SFTPBP07988 381 aa11.28□□□□□ -0.6
SEC13-205ENST00000397101 MGMTP16455 207 aa11.28□□□□□ -0.6
SEC13-205ENST00000397101 GABRR1P24046 479 aa11.28□□□□□ -0.6
SEC13-205ENST00000397101 RBMXP38159 391 aaKnown RBP11.28□□□□□ -0.6
SEC13-205ENST00000397101 SCAND1P57086 179 aa11.28□□□□□ -0.6
SEC13-205ENST00000397101 SCN1BQ07699 218 aa11.28□□□□□ -0.6
SEC13-205ENST00000397101 DYNC1I2Q13409 638 aaKnown RBP11.28□□□□□ -0.6
SEC13-205ENST00000397101 FAM189A2Q15884 450 aa11.28□□□□□ -0.6
SEC13-205ENST00000397101 TAF9Q16594 264 aa11.28□□□□□ -0.6
SEC13-205ENST00000397101 DEFB112Q30KQ8 113 aa11.28□□□□□ -0.6
SEC13-205ENST00000397101 UBE2NLQ5JXB2 153 aa11.28□□□□□ -0.6
SEC13-205ENST00000397101 SFRP4Q6FHJ7 346 aaPredicted RBP11.28□□□□□ -0.6
SEC13-205ENST00000397101 ASCL4Q6XD76 172 aa11.28□□□□□ -0.6
SEC13-205ENST00000397101 C19orf18Q8NEA5 215 aa11.28□□□□□ -0.6
SEC13-205ENST00000397101 Q8TCH9 128 aa11.28□□□□□ -0.6
SEC13-205ENST00000397101 ZDHHC16Q969W1 377 aa11.28□□□□□ -0.6
SEC13-205ENST00000397101 RHOFQ9HBH0 211 aa11.28□□□□□ -0.6
SEC13-205ENST00000397101 RASL12Q9NYN1 266 aa11.28□□□□□ -0.6
SEC13-205ENST00000397101 IL36GQ9NZH8 169 aa11.28□□□□□ -0.6
SEC13-205ENST00000397101 OR14J1Q9UGF5 321 aa11.28□□□□□ -0.6
SEC13-205ENST00000397101 ST3GAL6Q9Y274 331 aa11.28□□□□□ -0.6
SEC13-205ENST00000397101 PEX16Q9Y5Y5 336 aa11.28□□□□□ -0.6
SEC13-205ENST00000397101 SOX21Q9Y651 276 aaPredicted RBP11.28□□□□□ -0.6
SEC13-205ENST00000397101 IGHV3OR15-7A0A075B7D8 119 aa11.27□□□□□ -0.61
SEC13-205ENST00000397101 KIR2DS1A0A191URI9 304 aa11.27□□□□□ -0.61
SEC13-205ENST00000397101 MDFIC2A0A1B0GVS7 189 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms