RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 PTPN13Q12923 2485 aa13.08□□□□□ -0.32
MCF2L-205ENST00000397017 SCTP09683 121 aa13.08□□□□□ -0.32
MCF2L-205ENST00000397017 HOXA4Q00056 320 aaPredicted RBP13.08□□□□□ -0.32
MCF2L-205ENST00000397017 FAM201AQ5SY85 155 aa13.08□□□□□ -0.32
MCF2L-205ENST00000397017 C1orf185Q5T7R7 199 aa13.08□□□□□ -0.32
MCF2L-205ENST00000397017 INO80CQ6PI98 192 aaPredicted RBP13.08□□□□□ -0.32
MCF2L-205ENST00000397017 CLEC18BQ6UXF7 455 aa13.08□□□□□ -0.32
MCF2L-205ENST00000397017 PDZD9Q8IXQ8 264 aa13.08□□□□□ -0.32
MCF2L-205ENST00000397017 RPS4Y2Q8TD47 263 aa13.08□□□□□ -0.32
MCF2L-205ENST00000397017 HRH4Q9H3N8 390 aa13.08□□□□□ -0.32
MCF2L-205ENST00000397017 GFOD1Q9NXC2 390 aa13.08□□□□□ -0.32
MCF2L-205ENST00000397017 PCDHB10Q9UN67 800 aa13.08□□□□□ -0.32
MCF2L-205ENST00000397017 LRP4O75096 1905 aa13.08□□□□□ -0.32
MCF2L-205ENST00000397017 CCL21O00585 134 aa13.07□□□□□ -0.32
MCF2L-205ENST00000397017 TMEM127O75204 238 aa13.07□□□□□ -0.32
MCF2L-205ENST00000397017 AADACP22760 399 aa13.07□□□□□ -0.32
MCF2L-205ENST00000397017 PSMB6P28072 239 aa13.07□□□□□ -0.32
MCF2L-205ENST00000397017 RBM11P57052 281 aaKnown RBP13.07□□□□□ -0.32
MCF2L-205ENST00000397017 ACSF3Q4G176 576 aaPredicted RBP13.07□□□□□ -0.32
MCF2L-205ENST00000397017 Q6ZT83 130 aa13.07□□□□□ -0.32
MCF2L-205ENST00000397017 TMEM200AQ86VY9 491 aa13.07□□□□□ -0.32
MCF2L-205ENST00000397017 RND1Q92730 232 aa13.07□□□□□ -0.32
MCF2L-205ENST00000397017 SLC25A28Q96A46 364 aa13.07□□□□□ -0.32
MCF2L-205ENST00000397017 KIF25Q9UIL4 384 aa13.07□□□□□ -0.32
MCF2L-205ENST00000397017 ZNF705EA8MWA4 302 aaPredicted RBP13.07□□□□□ -0.32
MCF2L-205ENST00000397017 H0YL77 283 aa13.07□□□□□ -0.32
MCF2L-205ENST00000397017 IL18BPO95998 194 aa13.07□□□□□ -0.32
MCF2L-205ENST00000397017 CECR9P0C854 216 aa13.07□□□□□ -0.32
MCF2L-205ENST00000397017 CEACAM21Q3KPI0 293 aa13.07□□□□□ -0.32
MCF2L-205ENST00000397017 FAM209AQ5JX71 171 aa13.07□□□□□ -0.32
MCF2L-205ENST00000397017 OR11H4Q8NGC9 324 aa13.07□□□□□ -0.32
MCF2L-205ENST00000397017 OR5A2Q8NGI9 324 aa13.07□□□□□ -0.32
MCF2L-205ENST00000397017 TCTEX1D2Q8WW35 142 aa13.07□□□□□ -0.32
MCF2L-205ENST00000397017 MED19A0JLT2 244 aaPredicted RBP13.07□□□□□ -0.32
MCF2L-205ENST00000397017 OR5B21A6NL26 309 aa13.07□□□□□ -0.32
MCF2L-205ENST00000397017 ZNF680Q8NEM1 530 aa13.07□□□□□ -0.32
MCF2L-205ENST00000397017 GLYATL2Q8WU03 294 aa13.07□□□□□ -0.32
MCF2L-205ENST00000397017 CSPG4Q6UVK1 2322 aa13.07□□□□□ -0.32
MCF2L-205ENST00000397017 IL5P05113 134 aa13.07□□□□□ -0.32
MCF2L-205ENST00000397017 CEACAM6P40199 344 aa13.07□□□□□ -0.32
MCF2L-205ENST00000397017 ALDH3B1P43353 468 aa13.07□□□□□ -0.32
MCF2L-205ENST00000397017 EXOSC2Q13868 293 aaKnown RBP13.07□□□□□ -0.32
MCF2L-205ENST00000397017 SHEQ5VZ18 495 aa13.07□□□□□ -0.32
MCF2L-205ENST00000397017 TMEM108Q6UXF1 575 aa13.07□□□□□ -0.32
MCF2L-205ENST00000397017 TMED6Q8WW62 240 aa13.07□□□□□ -0.32
MCF2L-205ENST00000397017 AQP3Q92482 292 aa13.07□□□□□ -0.32
MCF2L-205ENST00000397017 ZNF816Q0VGE8 651 aaPredicted RBP13.06□□□□□ -0.32
MCF2L-205ENST00000397017 C2orf68Q2NKX9 166 aa13.06□□□□□ -0.32
MCF2L-205ENST00000397017 PRR30Q53SZ7 412 aaPredicted RBP13.06□□□□□ -0.32
MCF2L-205ENST00000397017 LGI3Q8N145 548 aa13.06□□□□□ -0.32
MCF2L-205ENST00000397017 SUMF2Q8NBJ7 301 aa13.06□□□□□ -0.32
MCF2L-205ENST00000397017 LILRB4Q8NHJ6 448 aa13.06□□□□□ -0.32
MCF2L-205ENST00000397017 BCL2L2Q92843 193 aaPredicted RBP13.06□□□□□ -0.32
MCF2L-205ENST00000397017 SH2D2AQ9NP31 389 aa13.06□□□□□ -0.32
MCF2L-205ENST00000397017 A0A0A6YYD4 124 aa13.06□□□□□ -0.32
MCF2L-205ENST00000397017 ZNF503-AS2A6NEH8 195 aa13.06□□□□□ -0.32
MCF2L-205ENST00000397017 CDRT15L2A8MXV6 281 aa13.06□□□□□ -0.32
MCF2L-205ENST00000397017 MPV17P39210 176 aa13.06□□□□□ -0.32
MCF2L-205ENST00000397017 SSBP1Q04837 148 aaKnown RBP13.06□□□□□ -0.32
MCF2L-205ENST00000397017 MPPED2Q15777 294 aa13.06□□□□□ -0.32
MCF2L-205ENST00000397017 HIST3H3Q16695 136 aa13.06□□□□□ -0.32
MCF2L-205ENST00000397017 TMEM45BQ96B21 275 aa13.06□□□□□ -0.32
MCF2L-205ENST00000397017 POM121L2Q96KW2 1035 aa13.06□□□□□ -0.32
MCF2L-205ENST00000397017 C16orf97H3BN30 126 aa13.06□□□□□ -0.32
MCF2L-205ENST00000397017 B3GALNT1O75752 331 aa13.06□□□□□ -0.32
MCF2L-205ENST00000397017 SCO1O75880 301 aa13.06□□□□□ -0.32
MCF2L-205ENST00000397017 KRASP01116 189 aa13.06□□□□□ -0.32
MCF2L-205ENST00000397017 SULT1A3P0DMM9 295 aa13.06□□□□□ -0.32
MCF2L-205ENST00000397017 SULT1A4P0DMN0 295 aa13.06□□□□□ -0.32
MCF2L-205ENST00000397017 RRASP10301 218 aa13.06□□□□□ -0.32
MCF2L-205ENST00000397017 TBPP20226 339 aa13.06□□□□□ -0.32
MCF2L-205ENST00000397017 TNFAIP6P98066 277 aaPredicted RBP13.06□□□□□ -0.32
MCF2L-205ENST00000397017 RAB32Q13637 225 aa13.06□□□□□ -0.32
MCF2L-205ENST00000397017 PXDC1Q5TGL8 231 aa13.06□□□□□ -0.32
MCF2L-205ENST00000397017 DMBX1Q8NFW5 382 aa13.06□□□□□ -0.32
MCF2L-205ENST00000397017 CCL28Q9NRJ3 127 aa13.06□□□□□ -0.32
MCF2L-205ENST00000397017 F8VVB4 439 aa13.05□□□□□ -0.32
MCF2L-205ENST00000397017 F8VWA3 439 aa13.05□□□□□ -0.32
MCF2L-205ENST00000397017 ETV2O00321 342 aaPredicted RBP13.05□□□□□ -0.32
MCF2L-205ENST00000397017 SPINT2O43291 252 aa13.05□□□□□ -0.32
MCF2L-205ENST00000397017 OR2F2O95006 317 aa13.05□□□□□ -0.32
MCF2L-205ENST00000397017 IFNA17P01571 189 aa13.05□□□□□ -0.32
MCF2L-205ENST00000397017 FCGR3AP08637 254 aa13.05□□□□□ -0.32
MCF2L-205ENST00000397017 MZT1Q08AG7 82 aa13.05□□□□□ -0.32
MCF2L-205ENST00000397017 LY6DQ14210 128 aa13.05□□□□□ -0.32
MCF2L-205ENST00000397017 SMIM21Q3B7S5 101 aa13.05□□□□□ -0.32
MCF2L-205ENST00000397017 PRDM14Q9GZV8 571 aa13.05□□□□□ -0.32
MCF2L-205ENST00000397017 C7orf66A4D0T2 115 aa13.05□□□□□ -0.32
MCF2L-205ENST00000397017 PSG7Q13046 419 aa13.05□□□□□ -0.32
MCF2L-205ENST00000397017 EIF5AL1Q6IS14 154 aaKnown RBP13.05□□□□□ -0.32
MCF2L-205ENST00000397017 NDRG3Q9UGV2 375 aa13.05□□□□□ -0.32
MCF2L-205ENST00000397017 IGKV1-27A0A075B6S5 117 aa13.05□□□□□ -0.32
MCF2L-205ENST00000397017 A0A1W2PPE3 182 aa13.05□□□□□ -0.32
MCF2L-205ENST00000397017 J3QT63 122 aa13.05□□□□□ -0.32
MCF2L-205ENST00000397017 CPN1P15169 458 aa13.05□□□□□ -0.32
MCF2L-205ENST00000397017 CRYGSP22914 178 aa13.05□□□□□ -0.32
MCF2L-205ENST00000397017 BTNL3Q6UXE8 466 aa13.05□□□□□ -0.32
MCF2L-205ENST00000397017 BIVMQ86UB2 503 aa13.05□□□□□ -0.32
MCF2L-205ENST00000397017 LINC00470Q9BZP3 86 aa13.05□□□□□ -0.32
MCF2L-205ENST00000397017 EDARQ9UNE0 448 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms