RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 IGKV1-27A0A075B6S5 117 aa8.53□□□□□ -1.04
NEDD8-202ENST00000396828 LRRC30A6NM36 301 aa8.53□□□□□ -1.04
NEDD8-202ENST00000396828 SRRM5B3KS81 715 aa8.53□□□□□ -1.04
NEDD8-202ENST00000396828 C3orf80F5H4A9 247 aa8.53□□□□□ -1.04
NEDD8-202ENST00000396828 IFNL4K9M1U5 179 aa8.53□□□□□ -1.04
NEDD8-202ENST00000396828 KDM4BO94953 1096 aa8.53□□□□□ -1.04
NEDD8-202ENST00000396828 FSTL3O95633 263 aa8.53□□□□□ -1.04
NEDD8-202ENST00000396828 PAHP00439 452 aa8.53□□□□□ -1.04
NEDD8-202ENST00000396828 APOA1P02647 267 aa8.53□□□□□ -1.04
NEDD8-202ENST00000396828 CSTBP04080 98 aaKnown RBP8.53□□□□□ -1.04
NEDD8-202ENST00000396828 MMP9P14780 707 aa8.53□□□□□ -1.04
NEDD8-202ENST00000396828 CD200P41217 278 aa8.53□□□□□ -1.04
NEDD8-202ENST00000396828 ZP1P60852 638 aa8.53□□□□□ -1.04
NEDD8-202ENST00000396828 PDZK1IP1Q13113 114 aa8.53□□□□□ -1.04
NEDD8-202ENST00000396828 SPANXN2Q5MJ10 180 aa8.53□□□□□ -1.04
NEDD8-202ENST00000396828 FIP1L1Q6UN15 594 aaKnown RBP8.53□□□□□ -1.04
NEDD8-202ENST00000396828 Q6YL49 198 aa8.53□□□□□ -1.04
NEDD8-202ENST00000396828 DCDC5Q6ZRR9 648 aa8.53□□□□□ -1.04
NEDD8-202ENST00000396828 ZNF826PQ6ZT77 177 aa8.53□□□□□ -1.04
NEDD8-202ENST00000396828 OR2W3Q7Z3T1 314 aa8.53□□□□□ -1.04
NEDD8-202ENST00000396828 LAX1Q8IWV1 398 aa8.53□□□□□ -1.04
NEDD8-202ENST00000396828 SAXO1Q8IYX7 474 aa8.53□□□□□ -1.04
NEDD8-202ENST00000396828 BOLLQ8N9W6 283 aaKnown RBP8.53□□□□□ -1.04
NEDD8-202ENST00000396828 KCNG3Q8TAE7 436 aa8.53□□□□□ -1.04
NEDD8-202ENST00000396828 Q8TCH9 128 aa8.53□□□□□ -1.04
NEDD8-202ENST00000396828 PTX4Q96A99 478 aa8.53□□□□□ -1.04
NEDD8-202ENST00000396828 PHF21AQ96BD5 680 aa8.53□□□□□ -1.04
NEDD8-202ENST00000396828 S100A16Q96FQ6 103 aaKnown RBP8.53□□□□□ -1.04
NEDD8-202ENST00000396828 DIRAS2Q96HU8 199 aa8.53□□□□□ -1.04
NEDD8-202ENST00000396828 NKX3-1Q99801 234 aaPredicted RBP8.53□□□□□ -1.04
NEDD8-202ENST00000396828 PCGF1Q9BSM1 259 aa8.53□□□□□ -1.04
NEDD8-202ENST00000396828 PKIBQ9C010 78 aa8.53□□□□□ -1.04
NEDD8-202ENST00000396828 OR51I2Q9H344 312 aa8.53□□□□□ -1.04
NEDD8-202ENST00000396828 C1RLQ9NZP8 487 aa8.53□□□□□ -1.04
NEDD8-202ENST00000396828 POLDIP2Q9Y2S7 368 aa8.53□□□□□ -1.04
NEDD8-202ENST00000396828 CENPVL3A0A0U1RRI6 287 aa8.52□□□□□ -1.05
NEDD8-202ENST00000396828 TMEM272A0A1B0GTI8 110 aa8.52□□□□□ -1.05
NEDD8-202ENST00000396828 METTL21EPA6NDL7 271 aa8.52□□□□□ -1.05
NEDD8-202ENST00000396828 J3QT63 122 aa8.52□□□□□ -1.05
NEDD8-202ENST00000396828 CRTAPO75718 401 aaPredicted RBP8.52□□□□□ -1.05
NEDD8-202ENST00000396828 GRPP07492 148 aa8.52□□□□□ -1.05
NEDD8-202ENST00000396828 MELTFP08582 738 aa8.52□□□□□ -1.05
NEDD8-202ENST00000396828 ELK1P19419 428 aa8.52□□□□□ -1.05
NEDD8-202ENST00000396828 RAB6AP20340 208 aa8.52□□□□□ -1.05
NEDD8-202ENST00000396828 TNFSF8P32971 234 aa8.52□□□□□ -1.05
NEDD8-202ENST00000396828 CFHR2P36980 270 aa8.52□□□□□ -1.05
NEDD8-202ENST00000396828 IL24Q13007 206 aa8.52□□□□□ -1.05
NEDD8-202ENST00000396828 SLC22A6Q4U2R8 563 aa8.52□□□□□ -1.05
NEDD8-202ENST00000396828 FAM76BQ5HYJ3 339 aa8.52□□□□□ -1.05
NEDD8-202ENST00000396828 LCE2DQ5TA82 110 aaPredicted RBP8.52□□□□□ -1.05
NEDD8-202ENST00000396828 HAGHLQ6PII5 290 aaPredicted RBP8.52□□□□□ -1.05
NEDD8-202ENST00000396828 SLC25A26Q70HW3 274 aa8.52□□□□□ -1.05
NEDD8-202ENST00000396828 NLRC3Q7RTR2 1065 aa8.52□□□□□ -1.05
NEDD8-202ENST00000396828 RNF144BQ7Z419 303 aa8.52□□□□□ -1.05
NEDD8-202ENST00000396828 CALHM1Q8IU99 346 aa8.52□□□□□ -1.05
NEDD8-202ENST00000396828 CELF2-AS1Q8N7Q2 184 aa8.52□□□□□ -1.05
NEDD8-202ENST00000396828 SCCPDHQ8NBX0 429 aa8.52□□□□□ -1.05
NEDD8-202ENST00000396828 PXT1Q8NFP0 134 aa8.52□□□□□ -1.05
NEDD8-202ENST00000396828 OR5H6Q8NGV6 325 aa8.52□□□□□ -1.05
NEDD8-202ENST00000396828 WFDC12Q8WWY7 111 aa8.52□□□□□ -1.05
NEDD8-202ENST00000396828 WDFY2Q96P53 400 aa8.52□□□□□ -1.05
NEDD8-202ENST00000396828 FGF23Q9GZV9 251 aaPredicted RBP8.52□□□□□ -1.05
NEDD8-202ENST00000396828 ATG5Q9H1Y0 275 aa8.52□□□□□ -1.05
NEDD8-202ENST00000396828 RHOFQ9HBH0 211 aa8.52□□□□□ -1.05
NEDD8-202ENST00000396828 HMG20AQ9NP66 347 aa8.52□□□□□ -1.05
NEDD8-202ENST00000396828 FBLN5Q9UBX5 448 aa8.52□□□□□ -1.05
NEDD8-202ENST00000396828 RAB22AQ9UL26 194 aa8.52□□□□□ -1.05
NEDD8-202ENST00000396828 IGHV3OR15-7A0A075B7D8 119 aa8.51□□□□□ -1.05
NEDD8-202ENST00000396828 A0A1B0GW55 424 aa8.51□□□□□ -1.05
NEDD8-202ENST00000396828 A6NLC8 198 aa8.51□□□□□ -1.05
NEDD8-202ENST00000396828 ANGPTL7O43827 346 aa8.51□□□□□ -1.05
NEDD8-202ENST00000396828 SCGNO76038 276 aa8.51□□□□□ -1.05
NEDD8-202ENST00000396828 HTR3BO95264 441 aa8.51□□□□□ -1.05
NEDD8-202ENST00000396828 PTBP3O95758 552 aaKnown RBP8.51□□□□□ -1.05
NEDD8-202ENST00000396828 GYPAP02724 150 aa8.51□□□□□ -1.05
NEDD8-202ENST00000396828 DUX4L2P0CJ85 424 aa8.51□□□□□ -1.05
NEDD8-202ENST00000396828 DUX4L3P0CJ86 424 aa8.51□□□□□ -1.05
NEDD8-202ENST00000396828 DUX4L4P0CJ87 422 aa8.51□□□□□ -1.05
NEDD8-202ENST00000396828 DUX4L5P0CJ88 424 aa8.51□□□□□ -1.05
NEDD8-202ENST00000396828 DUX4L6P0CJ89 424 aa8.51□□□□□ -1.05
NEDD8-202ENST00000396828 DUX4L7P0CJ90 424 aa8.51□□□□□ -1.05
NEDD8-202ENST00000396828 VSIG8P0DPA2 414 aa8.51□□□□□ -1.05
NEDD8-202ENST00000396828 GTF2F2P13984 249 aa8.51□□□□□ -1.05
NEDD8-202ENST00000396828 IRF2P14316 349 aa8.51□□□□□ -1.05
NEDD8-202ENST00000396828 SERPINA2P20848 420 aa8.51□□□□□ -1.05
NEDD8-202ENST00000396828 CPT2P23786 658 aa8.51□□□□□ -1.05
NEDD8-202ENST00000396828 ZNF45Q02386 682 aa8.51□□□□□ -1.05
NEDD8-202ENST00000396828 PRB3Q04118 309 aaPredicted RBP8.51□□□□□ -1.05
NEDD8-202ENST00000396828 ZNF846Q147U1 533 aa8.51□□□□□ -1.05
NEDD8-202ENST00000396828 MIDNQ504T8 468 aa8.51□□□□□ -1.05
NEDD8-202ENST00000396828 GPR157Q5UAW9 335 aa8.51□□□□□ -1.05
NEDD8-202ENST00000396828 CRIP3Q6Q6R5 217 aa8.51□□□□□ -1.05
NEDD8-202ENST00000396828 DUX4L9Q6RFH8 374 aaPredicted RBP8.51□□□□□ -1.05
NEDD8-202ENST00000396828 METAP1DQ6UB28 335 aaPredicted RBP8.51□□□□□ -1.05
NEDD8-202ENST00000396828 ASCL4Q6XD76 172 aa8.51□□□□□ -1.05
NEDD8-202ENST00000396828 PDZD9Q8IXQ8 264 aa8.51□□□□□ -1.05
NEDD8-202ENST00000396828 Q8IYB0 196 aa8.51□□□□□ -1.05
NEDD8-202ENST00000396828 C1orf87Q8N0U7 546 aa8.51□□□□□ -1.05
NEDD8-202ENST00000396828 AQP3Q92482 292 aa8.51□□□□□ -1.05
NEDD8-202ENST00000396828 FAM46BQ96A09 425 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms