RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 S100A6P06703 90 aa13.53□□□□□ -0.24
HOXA3-202ENST00000396352 OR13C7P0DN81 318 aa13.53□□□□□ -0.24
HOXA3-202ENST00000396352 SLC16A13Q7RTY0 426 aa13.53□□□□□ -0.24
HOXA3-202ENST00000396352 FAM24BQ8N5W8 94 aa13.53□□□□□ -0.24
HOXA3-202ENST00000396352 LFNGQ8NES3 379 aa13.53□□□□□ -0.24
HOXA3-202ENST00000396352 OR2Y1Q8NGV0 311 aa13.53□□□□□ -0.24
HOXA3-202ENST00000396352 NANPQ8TBE9 248 aa13.53□□□□□ -0.24
HOXA3-202ENST00000396352 ADGRG7Q96K78 797 aa13.53□□□□□ -0.24
HOXA3-202ENST00000396352 TMEM56Q96MV1 263 aa13.53□□□□□ -0.24
HOXA3-202ENST00000396352 RARRES2Q99969 163 aa13.53□□□□□ -0.24
HOXA3-202ENST00000396352 KCNJ16Q9NPI9 418 aa13.53□□□□□ -0.24
HOXA3-202ENST00000396352 TMEM56-RWDD3S4R434 201 aa13.53□□□□□ -0.24
HOXA3-202ENST00000396352 A0A1W2PPE2 198 aa13.52□□□□□ -0.24
HOXA3-202ENST00000396352 IGHV2-5P01817 119 aa13.52□□□□□ -0.24
HOXA3-202ENST00000396352 CCL4P13236 92 aa13.52□□□□□ -0.24
HOXA3-202ENST00000396352 SLC25A26Q70HW3 274 aa13.52□□□□□ -0.24
HOXA3-202ENST00000396352 OR14L1PQ8NHC6 308 aa13.52□□□□□ -0.24
HOXA3-202ENST00000396352 CD300LFQ8TDQ1 290 aa13.52□□□□□ -0.24
HOXA3-202ENST00000396352 TMEM171Q8WVE6 324 aa13.52□□□□□ -0.24
HOXA3-202ENST00000396352 KCNE4Q8WWG9 221 aa13.52□□□□□ -0.24
HOXA3-202ENST00000396352 SPSB4Q96A44 273 aa13.52□□□□□ -0.24
HOXA3-202ENST00000396352 SLC7A10Q9NS82 523 aa13.52□□□□□ -0.24
HOXA3-202ENST00000396352 METTL1Q9UBP6 276 aaKnown RBP13.52□□□□□ -0.24
HOXA3-202ENST00000396352 PITX3O75364 302 aa13.52□□□□□ -0.24
HOXA3-202ENST00000396352 MMP7P09237 267 aaPredicted RBP13.52□□□□□ -0.24
HOXA3-202ENST00000396352 RFPL3SP0C7P2 107 aa13.52□□□□□ -0.24
HOXA3-202ENST00000396352 CLDN15P56746 228 aa13.52□□□□□ -0.24
HOXA3-202ENST00000396352 SRPXP78539 464 aa13.52□□□□□ -0.24
HOXA3-202ENST00000396352 CCL20P78556 96 aa13.52□□□□□ -0.24
HOXA3-202ENST00000396352 CLINT1Q14677 625 aa13.52□□□□□ -0.24
HOXA3-202ENST00000396352 TBC1D26Q86UD7 250 aa13.52□□□□□ -0.24
HOXA3-202ENST00000396352 ODF3L1Q8IXM7 274 aa13.52□□□□□ -0.24
HOXA3-202ENST00000396352 FAM185AQ8N0U4 392 aa13.52□□□□□ -0.24
HOXA3-202ENST00000396352 SUMF1Q8NBK3 374 aa13.52□□□□□ -0.24
HOXA3-202ENST00000396352 MALSU1Q96EH3 234 aa13.52□□□□□ -0.24
HOXA3-202ENST00000396352 YPEL4Q96NS1 127 aa13.52□□□□□ -0.24
HOXA3-202ENST00000396352 TECTBQ96PL2 329 aa13.52□□□□□ -0.24
HOXA3-202ENST00000396352 GPR35Q9HC97 309 aa13.52□□□□□ -0.24
HOXA3-202ENST00000396352 ZNF724A8MTY0 619 aa13.52□□□□□ -0.25
HOXA3-202ENST00000396352 GPR37O15354 613 aa13.52□□□□□ -0.25
HOXA3-202ENST00000396352 ZNF14P17017 642 aaPredicted RBP13.52□□□□□ -0.25
HOXA3-202ENST00000396352 ATP6V0CP27449 155 aa13.52□□□□□ -0.25
HOXA3-202ENST00000396352 POLR2GP62487 172 aaKnown RBP eCLIP13.52□□□□□ -0.25
HOXA3-202ENST00000396352 FABP9Q0Z7S8 132 aa13.52□□□□□ -0.25
HOXA3-202ENST00000396352 RIPPLY2Q5TAB7 128 aa13.52□□□□□ -0.25
HOXA3-202ENST00000396352 Q6ZS49 121 aa13.52□□□□□ -0.25
HOXA3-202ENST00000396352 Q8NFD4 153 aa13.52□□□□□ -0.25
HOXA3-202ENST00000396352 ABHD14AQ9BUJ0 271 aa13.52□□□□□ -0.25
HOXA3-202ENST00000396352 RPL36A-HNRNPH2H7BZ11 118 aa13.51□□□□□ -0.25
HOXA3-202ENST00000396352 DPPA2Q7Z7J5 298 aa13.51□□□□□ -0.25
HOXA3-202ENST00000396352 OR10D3Q8NH80 312 aa13.51□□□□□ -0.25
HOXA3-202ENST00000396352 C1QTNF5Q9BXJ0 243 aa13.51□□□□□ -0.25
HOXA3-202ENST00000396352 LYRM2Q9NU23 88 aaPredicted RBP13.51□□□□□ -0.25
HOXA3-202ENST00000396352 C9J4A7 227 aa13.51□□□□□ -0.25
HOXA3-202ENST00000396352 NKX2-1P43699 371 aaPredicted RBP13.51□□□□□ -0.25
HOXA3-202ENST00000396352 SPSB3Q6PJ21 355 aa13.51□□□□□ -0.25
HOXA3-202ENST00000396352 SELENOHQ8IZQ5 122 aaKnown RBP13.51□□□□□ -0.25
HOXA3-202ENST00000396352 CPEB3Q8NE35 698 aaKnown RBP13.51□□□□□ -0.25
HOXA3-202ENST00000396352 EXTL1Q92935 676 aa13.51□□□□□ -0.25
HOXA3-202ENST00000396352 PARPBPQ9NWS1 579 aa13.51□□□□□ -0.25
HOXA3-202ENST00000396352 LRRC3CA6NJW4 275 aa13.51□□□□□ -0.25
HOXA3-202ENST00000396352 MAS1LP35410 378 aa13.51□□□□□ -0.25
HOXA3-202ENST00000396352 PCBD1P61457 104 aa13.51□□□□□ -0.25
HOXA3-202ENST00000396352 ZNF266Q14584 549 aa13.51□□□□□ -0.25
HOXA3-202ENST00000396352 ZNF818PQ6ZRF7 136 aa13.51□□□□□ -0.25
HOXA3-202ENST00000396352 OR2G3Q8NGZ4 309 aa13.51□□□□□ -0.25
HOXA3-202ENST00000396352 FGF23Q9GZV9 251 aaPredicted RBP13.51□□□□□ -0.25
HOXA3-202ENST00000396352 GLRX2Q9NS18 164 aa13.51□□□□□ -0.25
HOXA3-202ENST00000396352 PROB1E7EW31 1015 aa13.5□□□□□ -0.25
HOXA3-202ENST00000396352 SSSCA1O60232 199 aa13.5□□□□□ -0.25
HOXA3-202ENST00000396352 OR8U8P0C7N1 319 aa13.5□□□□□ -0.25
HOXA3-202ENST00000396352 RND3P61587 244 aa13.5□□□□□ -0.25
HOXA3-202ENST00000396352 RPS23P62266 143 aaKnown RBP13.5□□□□□ -0.25
HOXA3-202ENST00000396352 SP5Q6BEB4 398 aaPredicted RBP13.5□□□□□ -0.25
HOXA3-202ENST00000396352 SGCZQ96LD1 299 aa13.5□□□□□ -0.25
HOXA3-202ENST00000396352 GPHA2Q96T91 129 aa13.5□□□□□ -0.25
HOXA3-202ENST00000396352 CDRT15L2A8MXV6 281 aa13.5□□□□□ -0.25
HOXA3-202ENST00000396352 BCL3P20749 454 aa13.5□□□□□ -0.25
HOXA3-202ENST00000396352 HERPUD1Q15011 391 aa13.5□□□□□ -0.25
HOXA3-202ENST00000396352 CXorf66Q5JRM2 361 aaPredicted RBP13.5□□□□□ -0.25
HOXA3-202ENST00000396352 SLC23A3Q6PIS1 610 aa13.5□□□□□ -0.25
HOXA3-202ENST00000396352 ZFP62Q8NB50 900 aaPredicted RBP13.5□□□□□ -0.25
HOXA3-202ENST00000396352 OR2V1Q8NHB1 315 aa13.5□□□□□ -0.25
HOXA3-202ENST00000396352 HS3ST6Q96QI5 342 aa13.5□□□□□ -0.25
HOXA3-202ENST00000396352 PRDM14Q9GZV8 571 aa13.5□□□□□ -0.25
HOXA3-202ENST00000396352 SMDT1Q9H4I9 107 aa13.5□□□□□ -0.25
HOXA3-202ENST00000396352 PLEKHF2Q9H8W4 249 aa13.5□□□□□ -0.25
HOXA3-202ENST00000396352 Q9N2K0 584 aa13.5□□□□□ -0.25
HOXA3-202ENST00000396352 CRIM1Q9NZV1 1036 aa13.5□□□□□ -0.25
HOXA3-202ENST00000396352 UBE2J1Q9Y385 318 aaPredicted RBP13.5□□□□□ -0.25
HOXA3-202ENST00000396352 TMEM50AO95807 157 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 NAPSAO96009 420 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 OMGP23515 440 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 COLCA1Q6ZS62 124 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 ZNF695Q8IW36 515 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 TMEM252Q8N6L7 170 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 ABHD3Q8WU67 409 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 POM121Q96HA1 1249 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 SIGLEC12Q96PQ1 595 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 ZNF251Q9BRH9 671 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms