RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 PGA4P0DJD7 388 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 PGA5P0DJD9 388 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 LPAR6P43657 344 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 IL24Q13007 206 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 VAMP3Q15836 100 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 Q3ZCU0 254 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 ATG4DQ86TL0 474 aaPredicted RBP4.82□□□□□ -1.64
VPS13C-204ENST00000395898 ABCA7Q8IZY2 2146 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 NFAM1Q8NET5 270 aaPredicted RBP4.82□□□□□ -1.64
VPS13C-204ENST00000395898 OR5A2Q8NGI9 324 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 CT55Q8WUE5 264 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 RASL11BQ9BPW5 248 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 FZR1Q9UM11 496 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 LIPT2A6NK58 231 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 M0R296 226 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 OGG1O15527 345 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 TXNDC12O95881 172 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 PCMT1P22061 227 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 LSM11P83369 360 aaKnown RBP eCLIP4.82□□□□□ -1.64
VPS13C-204ENST00000395898 SSX1Q16384 188 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 RPEL1Q2QD12 228 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 FNDC7Q5VTL7 733 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 NAT8BQ9UHF3 227 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 FREM3P0C091 2139 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 GSTZ1O43708 216 aaPredicted RBP4.82□□□□□ -1.64
VPS13C-204ENST00000395898 CT62P0C5K7 136 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 MRM1Q6IN84 353 aaKnown RBP4.82□□□□□ -1.64
VPS13C-204ENST00000395898 INO80CQ6PI98 192 aaPredicted RBP4.82□□□□□ -1.64
VPS13C-204ENST00000395898 VN1R4Q7Z5H5 301 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 OR6S1Q8NH40 331 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 PRSS3P2Q8NHM4 247 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 MRPL22Q9NWU5 206 aaKnown RBP4.82□□□□□ -1.64
VPS13C-204ENST00000395898 ONECUT2O95948 504 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 HLA-GP17693 338 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 CCKARP32238 428 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 SRP14P37108 136 aaKnown RBP4.82□□□□□ -1.64
VPS13C-204ENST00000395898 P2RY1P47900 373 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 HLXQ14774 488 aaPredicted RBP4.82□□□□□ -1.64
VPS13C-204ENST00000395898 INPP5JQ15735 1006 aaPredicted RBP4.82□□□□□ -1.64
VPS13C-204ENST00000395898 DMRTC1Q5HYR2 192 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 GGNBP1Q5YKI7 109 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 PET117Q6UWS5 81 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 OR10G4Q8NGN3 311 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 OR10G9Q8NGN4 311 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 OR10G7Q8NGN6 311 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 LRRC29Q8WV35 223 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 ABHD1Q96SE0 405 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 FAM90A27PA6NNH2 459 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 PDE6DO43924 150 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 WNT1P04628 370 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 DYNLT3P51808 116 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 RTP5Q14D33 572 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 TBC1D26Q86UD7 250 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 FAM24AA6NFZ4 105 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 NPIPB8E9PQR5 432 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 OPN1MWP04001 364 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 OPN1MW2P0DN77 364 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 OPN1MW3P0DN78 364 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 HNRNPA3P51991 378 aaKnown RBP4.82□□□□□ -1.64
VPS13C-204ENST00000395898 COX19Q49B96 90 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 C11orf42Q8N5U0 333 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 GMPPAQ96IJ6 420 aaPredicted RBP4.82□□□□□ -1.64
VPS13C-204ENST00000395898 SIGLEC14Q08ET2 396 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 FDX2Q6P4F2 183 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 OR4A4PQ8NGN8 299 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 CACNA1IQ9P0X4 2223 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 A0A1B0GTQ1 180 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 RAB32Q13637 225 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 STXBP6Q8NFX7 210 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 ASB5Q8WWX0 329 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 VPS25Q9BRG1 176 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 NRXN2Q9P2S2 1712 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 GNG7O60262 68 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 GYPAP02724 150 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 NQO2P16083 231 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 USF1P22415 310 aaPredicted RBP4.81□□□□□ -1.64
VPS13C-204ENST00000395898 UCNP55089 124 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 PAFAH1B2P68402 229 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 DMKNQ6E0U4 476 aaPredicted RBP4.81□□□□□ -1.64
VPS13C-204ENST00000395898 FAM219AQ8IW50 185 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 SLC26A10Q8NG04 563 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 OR1B1Q8NGR6 318 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 SLC25A40Q8TBP6 338 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 ZNF665Q9H7R5 613 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 DEFB108AA8MXU0 73 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 FCN1O00602 326 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 HAND1O96004 215 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 CTSDP07339 412 aaPredicted RBP4.81□□□□□ -1.64
VPS13C-204ENST00000395898 CCL2P13500 99 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 ORM2P19652 201 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 SOX8P57073 446 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 FAM109BQ6ICB4 259 aaPredicted RBP4.81□□□□□ -1.64
VPS13C-204ENST00000395898 THSD4Q6ZMP0 1018 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 WDR31Q8NA23 367 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 DPF1Q92782 380 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 OR2T8A6NH00 312 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 HOXD4P09016 255 aaPredicted RBP4.81□□□□□ -1.64
VPS13C-204ENST00000395898 RPL30P62888 115 aaKnown RBP4.81□□□□□ -1.64
VPS13C-204ENST00000395898 NHLH1Q02575 133 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 NHLH2Q02577 135 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms