RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 BOLLQ8N9W6 283 aaKnown RBP16.61■□□□□ 0.25
RAB5C-202ENST00000393860 PRR7Q8TB68 274 aa16.61■□□□□ 0.25
RAB5C-202ENST00000393860 LRRC29Q8WV35 223 aa16.61■□□□□ 0.25
RAB5C-202ENST00000393860 CCDC107Q8WV48 283 aa16.61■□□□□ 0.25
RAB5C-202ENST00000393860 ITLN1Q8WWA0 313 aa16.61■□□□□ 0.25
RAB5C-202ENST00000393860 RNASE6Q93091 150 aaKnown RBP16.61■□□□□ 0.25
RAB5C-202ENST00000393860 ZNF2Q9BSG1 426 aaPredicted RBP16.61■□□□□ 0.25
RAB5C-202ENST00000393860 RHOFQ9HBH0 211 aa16.61■□□□□ 0.25
RAB5C-202ENST00000393860 SPACA1Q9HBV2 294 aa16.61■□□□□ 0.25
RAB5C-202ENST00000393860 HES4Q9HCC6 221 aa16.61■□□□□ 0.25
RAB5C-202ENST00000393860 MGAT4CQ9UBM8 478 aa16.61■□□□□ 0.25
RAB5C-202ENST00000393860 SNRPGP15A8MWD9 76 aa16.6■□□□□ 0.25
RAB5C-202ENST00000393860 AKR1C4P17516 323 aa16.6■□□□□ 0.25
RAB5C-202ENST00000393860 EGR1P18146 543 aa16.6■□□□□ 0.25
RAB5C-202ENST00000393860 ZNF81P51508 661 aa16.6■□□□□ 0.25
RAB5C-202ENST00000393860 PAN3Q58A45 887 aaKnown RBP16.6■□□□□ 0.25
RAB5C-202ENST00000393860 MOGAT3Q86VF5 341 aa16.6■□□□□ 0.25
RAB5C-202ENST00000393860 LHFPL1Q86WI0 220 aa16.6■□□□□ 0.25
RAB5C-202ENST00000393860 CA5BP1Q8WTZ4 195 aa16.6■□□□□ 0.25
RAB5C-202ENST00000393860 NEUROG1Q92886 237 aa16.6■□□□□ 0.25
RAB5C-202ENST00000393860 PLPPR2Q96GM1 343 aa16.6■□□□□ 0.25
RAB5C-202ENST00000393860 MED30Q96HR3 178 aa16.6■□□□□ 0.25
RAB5C-202ENST00000393860 MEGF10Q96KG7 1140 aa16.6■□□□□ 0.25
RAB5C-202ENST00000393860 LIME1Q9H400 295 aa16.6■□□□□ 0.25
RAB5C-202ENST00000393860 ADGRG4Q8IZF6 3080 aa16.6■□□□□ 0.25
RAB5C-202ENST00000393860 SLC33A1O00400 549 aaPredicted RBP16.6■□□□□ 0.25
RAB5C-202ENST00000393860 NOS1APO75052 506 aaPredicted RBP16.6■□□□□ 0.25
RAB5C-202ENST00000393860 HAND1O96004 215 aa16.6■□□□□ 0.25
RAB5C-202ENST00000393860 NAPSAO96009 420 aa16.6■□□□□ 0.25
RAB5C-202ENST00000393860 OR4A8P0C604 315 aa16.6■□□□□ 0.25
RAB5C-202ENST00000393860 OR5H8P0DN80 308 aa16.6■□□□□ 0.25
RAB5C-202ENST00000393860 UQCRFS1P47985 274 aa16.6■□□□□ 0.25
RAB5C-202ENST00000393860 MZT1Q08AG7 82 aa16.6■□□□□ 0.25
RAB5C-202ENST00000393860 ADIPOQQ15848 244 aa16.6■□□□□ 0.25
RAB5C-202ENST00000393860 C20orf204Q6ZNR8 217 aa16.6■□□□□ 0.25
RAB5C-202ENST00000393860 TCTE3Q8IZS6 198 aa16.6■□□□□ 0.25
RAB5C-202ENST00000393860 LILRB4Q8NHJ6 448 aa16.6■□□□□ 0.25
RAB5C-202ENST00000393860 NECAP2Q9NVZ3 263 aa16.6■□□□□ 0.25
RAB5C-202ENST00000393860 TPRP12270 2363 aaKnown RBP16.59■□□□□ 0.25
RAB5C-202ENST00000393860 PTBP3O95758 552 aaKnown RBP16.59■□□□□ 0.25
RAB5C-202ENST00000393860 PPP1R1AQ13522 171 aa16.59■□□□□ 0.25
RAB5C-202ENST00000393860 C2orf68Q2NKX9 166 aa16.59■□□□□ 0.25
RAB5C-202ENST00000393860 ACP7Q6ZNF0 438 aa16.59■□□□□ 0.25
RAB5C-202ENST00000393860 DRAXINQ8NBI3 349 aaPredicted RBP16.59■□□□□ 0.25
RAB5C-202ENST00000393860 PLPPR1Q8TBJ4 325 aa16.59■□□□□ 0.25
RAB5C-202ENST00000393860 MRPL30Q8TCC3 161 aaKnown RBP16.59■□□□□ 0.25
RAB5C-202ENST00000393860 ZNF431Q8TF32 576 aaPredicted RBP16.59■□□□□ 0.25
RAB5C-202ENST00000393860 CHIAQ9BZP6 476 aa16.59■□□□□ 0.25
RAB5C-202ENST00000393860 Q9N2K0 584 aa16.59■□□□□ 0.25
RAB5C-202ENST00000393860 NGBQ9NPG2 151 aa16.59■□□□□ 0.25
RAB5C-202ENST00000393860 NBASA2RRP1 2371 aa16.59■□□□□ 0.25
RAB5C-202ENST00000393860 TRAV39A0A0B4J263 110 aa16.58■□□□□ 0.25
RAB5C-202ENST00000393860 SH2D1BO14796 132 aa16.58■□□□□ 0.25
RAB5C-202ENST00000393860 IGHV1-46P01743 117 aa16.58■□□□□ 0.25
RAB5C-202ENST00000393860 ATXN7L3Q14CW9 347 aaPredicted RBP16.58■□□□□ 0.25
RAB5C-202ENST00000393860 ZNF146Q15072 292 aa16.58■□□□□ 0.25
RAB5C-202ENST00000393860 FBXL19-AS1Q494R0 122 aa16.58■□□□□ 0.25
RAB5C-202ENST00000393860 IGSF11Q5DX21 431 aa16.58■□□□□ 0.25
RAB5C-202ENST00000393860 NCMAPQ5T1S8 102 aa16.58■□□□□ 0.25
RAB5C-202ENST00000393860 SLC25A42Q86VD7 318 aa16.58■□□□□ 0.25
RAB5C-202ENST00000393860 OR5T2Q8NGG2 359 aa16.58■□□□□ 0.25
RAB5C-202ENST00000393860 ALX4Q9H161 411 aaPredicted RBP16.58■□□□□ 0.25
RAB5C-202ENST00000393860 IFT22Q9H7X7 185 aa16.58■□□□□ 0.25
RAB5C-202ENST00000393860 TREM2Q9NZC2 230 aa16.58■□□□□ 0.25
RAB5C-202ENST00000393860 ERRFI1Q9UJM3 462 aaPredicted RBP16.58■□□□□ 0.25
RAB5C-202ENST00000393860 HLA-AP01891 365 aaKnown RBP16.58■□□□□ 0.24
RAB5C-202ENST00000393860 ACAA1P09110 424 aaPredicted RBP16.58■□□□□ 0.24
RAB5C-202ENST00000393860 PGAM2P15259 253 aa16.58■□□□□ 0.24
RAB5C-202ENST00000393860 DHRS2Q13268 280 aa16.58■□□□□ 0.24
RAB5C-202ENST00000393860 RBM39Q14498 530 aaKnown RBP16.58■□□□□ 0.24
RAB5C-202ENST00000393860 GRK1Q15835 563 aa16.58■□□□□ 0.24
RAB5C-202ENST00000393860 SPIN3Q5JUX0 258 aa16.58■□□□□ 0.24
RAB5C-202ENST00000393860 FIP1L1Q6UN15 594 aaKnown RBP16.58■□□□□ 0.24
RAB5C-202ENST00000393860 SSX8Q7RTT4 187 aa16.58■□□□□ 0.24
RAB5C-202ENST00000393860 DMRTC2Q8IXT2 367 aaPredicted RBP16.58■□□□□ 0.24
RAB5C-202ENST00000393860 C5orf66Q9H5L9 145 aa16.58■□□□□ 0.24
RAB5C-202ENST00000393860 ESRP2Q9H6T0 727 aaKnown RBP16.58■□□□□ 0.24
RAB5C-202ENST00000393860 GPR132Q9UNW8 380 aa16.58■□□□□ 0.24
RAB5C-202ENST00000393860 MEIKINA0A087WXM9 373 aa16.57■□□□□ 0.24
RAB5C-202ENST00000393860 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.57■□□□□ 0.24
RAB5C-202ENST00000393860 SHISA9B4DS77 424 aa16.57■□□□□ 0.24
RAB5C-202ENST00000393860 TPD52L2O43399 206 aaKnown RBP16.57■□□□□ 0.24
RAB5C-202ENST00000393860 SIX6O95475 246 aa16.57■□□□□ 0.24
RAB5C-202ENST00000393860 SCTP09683 121 aa16.57■□□□□ 0.24
RAB5C-202ENST00000393860 ANXA3P12429 323 aa16.57■□□□□ 0.24
RAB5C-202ENST00000393860 FPR2P25090 351 aa16.57■□□□□ 0.24
RAB5C-202ENST00000393860 TNFAIP6P98066 277 aaPredicted RBP16.57■□□□□ 0.24
RAB5C-202ENST00000393860 ZCCHC24Q8N2G6 241 aaKnown RBP16.57■□□□□ 0.24
RAB5C-202ENST00000393860 WDR89Q96FK6 387 aaPredicted RBP16.57■□□□□ 0.24
RAB5C-202ENST00000393860 METRNQ9UJH8 293 aa16.57■□□□□ 0.24
RAB5C-202ENST00000393860 ICE1Q9Y2F5 2266 aa16.57■□□□□ 0.24
RAB5C-202ENST00000393860 PLCE1Q9P212 2302 aa16.57■□□□□ 0.24
RAB5C-202ENST00000393860 IGHV3OR15-7A0A075B7D8 119 aa16.57■□□□□ 0.24
RAB5C-202ENST00000393860 GOSR2O14653 212 aa16.57■□□□□ 0.24
RAB5C-202ENST00000393860 FABP7O15540 132 aa16.57■□□□□ 0.24
RAB5C-202ENST00000393860 GNLYP22749 145 aa16.57■□□□□ 0.24
RAB5C-202ENST00000393860 VAMP1P23763 118 aa16.57■□□□□ 0.24
RAB5C-202ENST00000393860 FXYD4P59646 89 aa16.57■□□□□ 0.24
RAB5C-202ENST00000393860 ZNF660Q6AZW8 331 aaPredicted RBP16.57■□□□□ 0.24
RAB5C-202ENST00000393860 LIN54Q6MZP7 749 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms