RNA–Protein interactions for RNA: ENST00000393211.3

COL17A1-203, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL17A1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-203ENST00000393211 OR2H1Q9GZK4 316 aa8.63□□□□□ -1.03
COL17A1-203ENST00000393211 ZNF442Q9H7R0 627 aa8.63□□□□□ -1.03
COL17A1-203ENST00000393211 PARPBPQ9NWS1 579 aa8.63□□□□□ -1.03
COL17A1-203ENST00000393211 CA14Q9ULX7 337 aa8.63□□□□□ -1.03
COL17A1-203ENST00000393211 MYO7BQ6PIF6 2116 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 ASXL3Q9C0F0 2248 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 KIR2DS1A0A191URI9 304 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 A0A1W2PPE2 198 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 FAM24AA6NFZ4 105 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 H3BQ15 152 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 WRBO00258 174 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 TNFSF11O14788 317 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 PPIHO43447 177 aaKnown RBP8.62□□□□□ -1.03
COL17A1-203ENST00000393211 GATCO43716 136 aaKnown RBP8.62□□□□□ -1.03
COL17A1-203ENST00000393211 DFFBO76075 338 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 IGHV2-70P01814 119 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 ARG1P05089 322 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 WNT2P09544 360 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 DAOP14920 347 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 CBR1P16152 277 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 ZNF32P17041 273 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 VDAC1P21796 283 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 UCP1P25874 307 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 EPHA8P29322 1005 aaPredicted RBP8.62□□□□□ -1.03
COL17A1-203ENST00000393211 GNRHRP30968 328 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 KIR2DS4P43632 304 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 HTR5AP47898 357 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 POLR2GP62487 172 aaKnown RBP eCLIP8.62□□□□□ -1.03
COL17A1-203ENST00000393211 PSG4Q00888 419 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 IL24Q13007 206 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 KIR2DS1Q14954 304 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 KHDC3LQ587J8 217 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 DNLZQ5SXM8 178 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 PLCXD3Q63HM9 321 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 GUSBP11Q6P575 273 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.62□□□□□ -1.03
COL17A1-203ENST00000393211 OR5D13Q8NGL4 314 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 GTF3AQ92664 365 aaKnown RBP8.62□□□□□ -1.03
COL17A1-203ENST00000393211 NAT6Q93015 286 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 SGCZQ96LD1 299 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 SRXN1Q9BYN0 137 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 PRDM14Q9GZV8 571 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 TOLLIPQ9H0E2 274 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 WNT5BQ9H1J7 359 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 RIMS4Q9H426 269 aaPredicted RBP8.62□□□□□ -1.03
COL17A1-203ENST00000393211 CRLF2Q9HC73 371 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 MIOXQ9UGB7 285 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 SSUH2Q9Y2M2 353 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 MRPS18CQ9Y3D5 142 aaKnown RBP8.62□□□□□ -1.03
COL17A1-203ENST00000393211 PUS1Q9Y606 427 aaKnown RBP eCLIP8.62□□□□□ -1.03
COL17A1-203ENST00000393211 LY6G6EA0A0G2JKS1 128 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 ZNF716A6NP11 495 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 ZNF724A8MTY0 619 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 LINC01387J3KSC0 135 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 HSD17B6O14756 317 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 TUSC2O75896 110 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 SCAF4O95104 1147 aaKnown RBP8.62□□□□□ -1.03
COL17A1-203ENST00000393211 SLC34A2O95436 690 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 NAPSAO96009 420 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 F10P00742 488 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 KLK3P07288 261 aaPredicted RBP8.62□□□□□ -1.03
COL17A1-203ENST00000393211 FBP1P09467 338 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 COX6A1P12074 109 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 S100GP29377 79 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 CDX1P47902 265 aaPredicted RBP8.62□□□□□ -1.03
COL17A1-203ENST00000393211 MLF1P58340 268 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 B3GALT5-AS1P59052 145 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 OR2B8PP59922 312 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 CD81P60033 236 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 UBE2KP61086 200 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 KIAA0141Q14154 515 aaPredicted RBP8.62□□□□□ -1.03
COL17A1-203ENST00000393211 RNPS1Q15287 305 aaKnown RBP8.62□□□□□ -1.03
COL17A1-203ENST00000393211 MPV17LQ2QL34 196 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 ACSF3Q4G176 576 aaPredicted RBP8.62□□□□□ -1.03
COL17A1-203ENST00000393211 NMSQ5H8A3 153 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 ABLIM2Q6H8Q1 611 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 MEX3BQ6ZN04 569 aaKnown RBP8.62□□□□□ -1.03
COL17A1-203ENST00000393211 AAED1Q7RTV5 226 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 TBC1D26Q86UD7 250 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 IL22RA1Q8N6P7 574 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 MR1Q95460 341 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 ZNF837Q96EG3 531 aaPredicted RBP8.62□□□□□ -1.03
COL17A1-203ENST00000393211 TVP23CQ96ET8 276 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 FOXB1Q99853 325 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 RARRES2Q99969 163 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 C1QTNF5Q9BXJ0 243 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 Q9N2K0 584 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 ZNF581Q9P0T4 197 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 DMRT1Q9Y5R6 373 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 U3KQA8 63 aa8.62□□□□□ -1.03
COL17A1-203ENST00000393211 GON4LQ3T8J9 2241 aa8.61□□□□□ -1.03
COL17A1-203ENST00000393211 LRP5LA4QPB2 252 aa8.61□□□□□ -1.03
COL17A1-203ENST00000393211 PROB1E7EW31 1015 aa8.61□□□□□ -1.03
COL17A1-203ENST00000393211 H0Y980 276 aa8.61□□□□□ -1.03
COL17A1-203ENST00000393211 OR7C1O76099 320 aaPredicted RBP8.61□□□□□ -1.03
COL17A1-203ENST00000393211 TAGLN2P37802 199 aaKnown RBP8.61□□□□□ -1.03
COL17A1-203ENST00000393211 CARD18P57730 90 aa8.61□□□□□ -1.03
COL17A1-203ENST00000393211 TAS2R30P59541 319 aa8.61□□□□□ -1.03
COL17A1-203ENST00000393211 ZNF92Q03936 586 aa8.61□□□□□ -1.03
COL17A1-203ENST00000393211 ICAM4Q14773 271 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms