RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 BVESQ8NE79 360 aa21.85■■□□□ 1.09
SMARCD3-203ENST00000392811 CNTNAP3BQ96NU0 1288 aa21.85■■□□□ 1.09
SMARCD3-203ENST00000392811 SUCNR1Q9BXA5 334 aa21.85■■□□□ 1.09
SMARCD3-203ENST00000392811 CNTNAP3Q9BZ76 1288 aa21.85■■□□□ 1.09
SMARCD3-203ENST00000392811 PKIBQ9C010 78 aa21.85■■□□□ 1.09
SMARCD3-203ENST00000392811 BARX1Q9HBU1 254 aaPredicted RBP21.85■■□□□ 1.09
SMARCD3-203ENST00000392811 TPT1P13693 172 aaKnown RBP21.85■■□□□ 1.09
SMARCD3-203ENST00000392811 LINC00596Q86U02 117 aa21.85■■□□□ 1.09
SMARCD3-203ENST00000392811 C17orf78Q8N4C9 275 aa21.85■■□□□ 1.09
SMARCD3-203ENST00000392811 SUMF2Q8NBJ7 301 aa21.85■■□□□ 1.09
SMARCD3-203ENST00000392811 SYT3Q9BQG1 590 aa21.85■■□□□ 1.09
SMARCD3-203ENST00000392811 OR2J1Q9GZK6 312 aa21.85■■□□□ 1.09
SMARCD3-203ENST00000392811 A0A1B0GW55 424 aa21.84■■□□□ 1.09
SMARCD3-203ENST00000392811 RHBDL1O75783 438 aa21.84■■□□□ 1.09
SMARCD3-203ENST00000392811 SCTP09683 121 aa21.84■■□□□ 1.09
SMARCD3-203ENST00000392811 DUX4L2P0CJ85 424 aa21.84■■□□□ 1.09
SMARCD3-203ENST00000392811 DUX4L3P0CJ86 424 aa21.84■■□□□ 1.09
SMARCD3-203ENST00000392811 DUX4L4P0CJ87 422 aa21.84■■□□□ 1.09
SMARCD3-203ENST00000392811 DUX4L5P0CJ88 424 aa21.84■■□□□ 1.09
SMARCD3-203ENST00000392811 DUX4L6P0CJ89 424 aa21.84■■□□□ 1.09
SMARCD3-203ENST00000392811 DUX4L7P0CJ90 424 aa21.84■■□□□ 1.09
SMARCD3-203ENST00000392811 GLI4P10075 376 aa21.84■■□□□ 1.09
SMARCD3-203ENST00000392811 ERVS71-1P61550 626 aa21.84■■□□□ 1.09
SMARCD3-203ENST00000392811 NAAAQ02083 359 aa21.84■■□□□ 1.09
SMARCD3-203ENST00000392811 FAM58AQ8N1B3 248 aa21.84■■□□□ 1.09
SMARCD3-203ENST00000392811 C9orf106Q8NAJ2 232 aa21.84■■□□□ 1.09
SMARCD3-203ENST00000392811 DUX4Q9UBX2 424 aa21.84■■□□□ 1.09
SMARCD3-203ENST00000392811 LGALS8O00214 317 aa21.84■■□□□ 1.09
SMARCD3-203ENST00000392811 KIR2DL2P43627 348 aaPredicted RBP21.84■■□□□ 1.09
SMARCD3-203ENST00000392811 LIAT1Q6ZQX7 453 aa21.84■■□□□ 1.09
SMARCD3-203ENST00000392811 EIF4E3Q8N5X7 224 aaKnown RBP21.84■■□□□ 1.09
SMARCD3-203ENST00000392811 LRTM2Q8N967 370 aa21.84■■□□□ 1.09
SMARCD3-203ENST00000392811 SARAFQ96BY9 339 aa21.84■■□□□ 1.09
SMARCD3-203ENST00000392811 SPACA1Q9HBV2 294 aa21.84■■□□□ 1.09
SMARCD3-203ENST00000392811 ESPL1Q14674 2120 aa21.83■■□□□ 1.09
SMARCD3-203ENST00000392811 J3QT63 122 aa21.83■■□□□ 1.09
SMARCD3-203ENST00000392811 BAP18Q8IXM2 172 aa21.83■■□□□ 1.09
SMARCD3-203ENST00000392811 CCDC71LQ8N9Z2 235 aa21.83■■□□□ 1.09
SMARCD3-203ENST00000392811 GLYATL2Q8WU03 294 aa21.83■■□□□ 1.09
SMARCD3-203ENST00000392811 SLC5A7Q9GZV3 580 aa21.83■■□□□ 1.09
SMARCD3-203ENST00000392811 TMA7Q9Y2S6 64 aaKnown RBP21.83■■□□□ 1.09
SMARCD3-203ENST00000392811 LOC400499M0QZD8 3231 aa21.83■■□□□ 1.08
SMARCD3-203ENST00000392811 BET1O15155 118 aa21.82■■□□□ 1.08
SMARCD3-203ENST00000392811 IL13RA2Q14627 380 aa21.82■■□□□ 1.08
SMARCD3-203ENST00000392811 HERPUD1Q15011 391 aa21.82■■□□□ 1.08
SMARCD3-203ENST00000392811 ZNF585AQ6P3V2 769 aa21.82■■□□□ 1.08
SMARCD3-203ENST00000392811 VWA1Q6PCB0 445 aa21.82■■□□□ 1.08
SMARCD3-203ENST00000392811 INO80CQ6PI98 192 aaPredicted RBP21.82■■□□□ 1.08
SMARCD3-203ENST00000392811 LYZL2Q7Z4W2 148 aa21.82■■□□□ 1.08
SMARCD3-203ENST00000392811 WDR86Q86TI4 376 aa21.82■■□□□ 1.08
SMARCD3-203ENST00000392811 MSI2Q96DH6 328 aaKnown RBP21.82■■□□□ 1.08
SMARCD3-203ENST00000392811 C18orf12Q96KH6 178 aa21.82■■□□□ 1.08
SMARCD3-203ENST00000392811 RTL8AQ9BWD3 113 aa21.82■■□□□ 1.08
SMARCD3-203ENST00000392811 NUP50Q9UKX7 468 aa21.82■■□□□ 1.08
SMARCD3-203ENST00000392811 TRAV24A0A0B4J272 114 aa21.82■■□□□ 1.08
SMARCD3-203ENST00000392811 ZNF891A8MT65 544 aaPredicted RBP21.82■■□□□ 1.08
SMARCD3-203ENST00000392811 HS3ST1O14792 307 aa21.82■■□□□ 1.08
SMARCD3-203ENST00000392811 CEACAM4O75871 244 aa21.82■■□□□ 1.08
SMARCD3-203ENST00000392811 TK1P04183 234 aa21.82■■□□□ 1.08
SMARCD3-203ENST00000392811 TRDCB7Z8K6 153 aa21.81■■□□□ 1.08
SMARCD3-203ENST00000392811 DIRAS3O95661 229 aa21.81■■□□□ 1.08
SMARCD3-203ENST00000392811 HKR1P10072 659 aa21.81■■□□□ 1.08
SMARCD3-203ENST00000392811 SLC25A40Q8TBP6 338 aa21.81■■□□□ 1.08
SMARCD3-203ENST00000392811 MRPL30Q8TCC3 161 aaKnown RBP21.81■■□□□ 1.08
SMARCD3-203ENST00000392811 RDH5Q92781 318 aa21.81■■□□□ 1.08
SMARCD3-203ENST00000392811 WNT2BQ93097 391 aa21.81■■□□□ 1.08
SMARCD3-203ENST00000392811 ATP23Q9Y6H3 246 aa21.81■■□□□ 1.08
SMARCD3-203ENST00000392811 CNOT1A5YKK6 2376 aaKnown RBP21.81■■□□□ 1.08
SMARCD3-203ENST00000392811 KIR2DS1A0A191URI9 304 aa21.8■■□□□ 1.08
SMARCD3-203ENST00000392811 H7C1Q1 480 aa21.8■■□□□ 1.08
SMARCD3-203ENST00000392811 PHF1O43189 567 aaPredicted RBP21.8■■□□□ 1.08
SMARCD3-203ENST00000392811 DEDDO75618 318 aa21.8■■□□□ 1.08
SMARCD3-203ENST00000392811 CNOT4O95628 575 aaKnown RBP21.8■■□□□ 1.08
SMARCD3-203ENST00000392811 GNRHRP30968 328 aa21.8■■□□□ 1.08
SMARCD3-203ENST00000392811 KIR2DS4P43632 304 aa21.8■■□□□ 1.08
SMARCD3-203ENST00000392811 KIR2DS1Q14954 304 aa21.8■■□□□ 1.08
SMARCD3-203ENST00000392811 ALKBH6Q3KRA9 238 aa21.8■■□□□ 1.08
SMARCD3-203ENST00000392811 LGI3Q8N145 548 aa21.8■■□□□ 1.08
SMARCD3-203ENST00000392811 GTF3AQ92664 365 aaKnown RBP21.8■■□□□ 1.08
SMARCD3-203ENST00000392811 LSM5Q9Y4Y9 91 aaKnown RBP21.8■■□□□ 1.08
SMARCD3-203ENST00000392811 PRR33A8MZF0 331 aa21.8■■□□□ 1.08
SMARCD3-203ENST00000392811 KRBOX1C9JBD0 128 aa21.8■■□□□ 1.08
SMARCD3-203ENST00000392811 SMCO1Q147U7 214 aa21.8■■□□□ 1.08
SMARCD3-203ENST00000392811 C20orf204Q6ZNR8 217 aa21.8■■□□□ 1.08
SMARCD3-203ENST00000392811 PRSS33Q8NF86 280 aa21.8■■□□□ 1.08
SMARCD3-203ENST00000392811 LHFPL5Q8TAF8 219 aa21.8■■□□□ 1.08
SMARCD3-203ENST00000392811 TAAR6Q96RI8 345 aa21.8■■□□□ 1.08
SMARCD3-203ENST00000392811 TP53RKQ96S44 253 aa21.8■■□□□ 1.08
SMARCD3-203ENST00000392811 DNTTIP1Q9H147 329 aa21.8■■□□□ 1.08
SMARCD3-203ENST00000392811 RIMS4Q9H426 269 aaPredicted RBP21.8■■□□□ 1.08
SMARCD3-203ENST00000392811 IGKV1-6A0A0C4DH72 117 aa21.79■■□□□ 1.08
SMARCD3-203ENST00000392811 MPPED1O15442 326 aa21.79■■□□□ 1.08
SMARCD3-203ENST00000392811 SLC34A2O95436 690 aa21.79■■□□□ 1.08
SMARCD3-203ENST00000392811 SCGB1D2O95969 90 aa21.79■■□□□ 1.08
SMARCD3-203ENST00000392811 COX5AP20674 150 aa21.79■■□□□ 1.08
SMARCD3-203ENST00000392811 KCNJ3P48549 501 aa21.79■■□□□ 1.08
SMARCD3-203ENST00000392811 UCP2P55851 309 aa21.79■■□□□ 1.08
SMARCD3-203ENST00000392811 FOXF2Q12947 444 aa21.79■■□□□ 1.08
SMARCD3-203ENST00000392811 TUSC1Q2TAM9 212 aa21.79■■□□□ 1.08
SMARCD3-203ENST00000392811 OR1J1Q8NGS3 322 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms