RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 RBM39Q14498 530 aaKnown RBP9.7□□□□□ -0.86
SMARCAL1-203ENST00000392128 SPIN3Q5JUX0 258 aa9.7□□□□□ -0.86
SMARCAL1-203ENST00000392128 SLC22A25Q6T423 547 aa9.7□□□□□ -0.86
SMARCAL1-203ENST00000392128 NLRC3Q7RTR2 1065 aa9.7□□□□□ -0.86
SMARCAL1-203ENST00000392128 LRP11Q86VZ4 500 aa9.7□□□□□ -0.86
SMARCAL1-203ENST00000392128 C12orf45Q8N5I9 185 aaPredicted RBP9.7□□□□□ -0.86
SMARCAL1-203ENST00000392128 NUP37Q8NFH4 326 aa9.7□□□□□ -0.86
SMARCAL1-203ENST00000392128 C5orf66Q9H5L9 145 aa9.7□□□□□ -0.86
SMARCAL1-203ENST00000392128 DECR2Q9NUI1 292 aa9.7□□□□□ -0.86
SMARCAL1-203ENST00000392128 ZZEF1O43149 2961 aa9.7□□□□□ -0.86
SMARCAL1-203ENST00000392128 CACNA1AO00555 2505 aa9.7□□□□□ -0.86
SMARCAL1-203ENST00000392128 NCOR2Q9Y618 2525 aa9.7□□□□□ -0.86
SMARCAL1-203ENST00000392128 TRBV6-6A0A0A6YYG2 114 aa9.7□□□□□ -0.86
SMARCAL1-203ENST00000392128 TMEM8BA6NDV4 472 aa9.7□□□□□ -0.86
SMARCAL1-203ENST00000392128 OR5H14A6NHG9 310 aa9.7□□□□□ -0.86
SMARCAL1-203ENST00000392128 DEGS1O15121 323 aa9.7□□□□□ -0.86
SMARCAL1-203ENST00000392128 OR2A4O95047 310 aa9.7□□□□□ -0.86
SMARCAL1-203ENST00000392128 NXPH2O95156 264 aa9.7□□□□□ -0.86
SMARCAL1-203ENST00000392128 SLC34A2O95436 690 aa9.7□□□□□ -0.86
SMARCAL1-203ENST00000392128 CD200P41217 278 aa9.7□□□□□ -0.86
SMARCAL1-203ENST00000392128 DHODHQ02127 395 aa9.7□□□□□ -0.86
SMARCAL1-203ENST00000392128 PPP1R1AQ13522 171 aa9.7□□□□□ -0.86
SMARCAL1-203ENST00000392128 DHRS11Q6UWP2 260 aa9.7□□□□□ -0.86
SMARCAL1-203ENST00000392128 ADAD2Q8NCV1 583 aaKnown RBP9.7□□□□□ -0.86
SMARCAL1-203ENST00000392128 OR2A7Q96R45 310 aa9.7□□□□□ -0.86
SMARCAL1-203ENST00000392128 ZNF2Q9BSG1 426 aaPredicted RBP9.7□□□□□ -0.86
SMARCAL1-203ENST00000392128 DPCDQ9BVM2 203 aaPredicted RBP9.7□□□□□ -0.86
SMARCAL1-203ENST00000392128 CHMP1AQ9HD42 196 aaPredicted RBP9.7□□□□□ -0.86
SMARCAL1-203ENST00000392128 Q9N2K0 584 aa9.7□□□□□ -0.86
SMARCAL1-203ENST00000392128 DUSP13Q9UII6 198 aa9.7□□□□□ -0.86
SMARCAL1-203ENST00000392128 C9orf170A2RU37 121 aa9.69□□□□□ -0.86
SMARCAL1-203ENST00000392128 PTBP3O95758 552 aaKnown RBP9.69□□□□□ -0.86
SMARCAL1-203ENST00000392128 THBDP07204 575 aa9.69□□□□□ -0.86
SMARCAL1-203ENST00000392128 MPPED2Q15777 294 aa9.69□□□□□ -0.86
SMARCAL1-203ENST00000392128 TMEM128Q5BJH2 165 aa9.69□□□□□ -0.86
SMARCAL1-203ENST00000392128 WDR82Q6UXN9 313 aa9.69□□□□□ -0.86
SMARCAL1-203ENST00000392128 NEK7Q8TDX7 302 aa9.69□□□□□ -0.86
SMARCAL1-203ENST00000392128 ASB13Q8WXK3 278 aa9.69□□□□□ -0.86
SMARCAL1-203ENST00000392128 DHRS9Q9BPW9 319 aa9.69□□□□□ -0.86
SMARCAL1-203ENST00000392128 TREM2Q9NZC2 230 aa9.69□□□□□ -0.86
SMARCAL1-203ENST00000392128 PIPOXQ9P0Z9 390 aa9.69□□□□□ -0.86
SMARCAL1-203ENST00000392128 CADP27708 2225 aa9.69□□□□□ -0.86
SMARCAL1-203ENST00000392128 IGHV3-64DA0A0J9YX35 117 aa9.68□□□□□ -0.86
SMARCAL1-203ENST00000392128 POM121CA8CG34 1229 aa9.68□□□□□ -0.86
SMARCAL1-203ENST00000392128 HSPB6O14558 160 aa9.68□□□□□ -0.86
SMARCAL1-203ENST00000392128 ZNF44P15621 663 aa9.68□□□□□ -0.86
SMARCAL1-203ENST00000392128 AKR1C4P17516 323 aa9.68□□□□□ -0.86
SMARCAL1-203ENST00000392128 CTRB1P17538 263 aa9.68□□□□□ -0.86
SMARCAL1-203ENST00000392128 MDH2P40926 338 aaKnown RBP9.68□□□□□ -0.86
SMARCAL1-203ENST00000392128 RAP2BP61225 183 aa9.68□□□□□ -0.86
SMARCAL1-203ENST00000392128 IL13RA1P78552 427 aa9.68□□□□□ -0.86
SMARCAL1-203ENST00000392128 PRAMEF6Q5VXH4 476 aa9.68□□□□□ -0.86
SMARCAL1-203ENST00000392128 SHEQ5VZ18 495 aa9.68□□□□□ -0.86
SMARCAL1-203ENST00000392128 CTRB2Q6GPI1 263 aa9.68□□□□□ -0.86
SMARCAL1-203ENST00000392128 SLC51BQ86UW2 128 aa9.68□□□□□ -0.86
SMARCAL1-203ENST00000392128 WFDC8Q8IUA0 241 aa9.68□□□□□ -0.86
SMARCAL1-203ENST00000392128 OR2Z1Q8NG97 314 aa9.68□□□□□ -0.86
SMARCAL1-203ENST00000392128 ZFAND1Q8TCF1 268 aa9.68□□□□□ -0.86
SMARCAL1-203ENST00000392128 MITD1Q8WV92 249 aa9.68□□□□□ -0.86
SMARCAL1-203ENST00000392128 RTBDNQ9BSG5 229 aaPredicted RBP9.68□□□□□ -0.86
SMARCAL1-203ENST00000392128 WDR13Q9H1Z4 485 aa9.68□□□□□ -0.86
SMARCAL1-203ENST00000392128 TMA7Q9Y2S6 64 aaKnown RBP9.68□□□□□ -0.86
SMARCAL1-203ENST00000392128 POLEQ07864 2286 aa9.68□□□□□ -0.86
SMARCAL1-203ENST00000392128 CHD3Q12873 2000 aaKnown RBP9.68□□□□□ -0.86
SMARCAL1-203ENST00000392128 ZSCAN5BA6NJL1 495 aa9.68□□□□□ -0.86
SMARCAL1-203ENST00000392128 A6NLC8 198 aa9.68□□□□□ -0.86
SMARCAL1-203ENST00000392128 C3orf80F5H4A9 247 aa9.68□□□□□ -0.86
SMARCAL1-203ENST00000392128 SLC33A1O00400 549 aaPredicted RBP9.68□□□□□ -0.86
SMARCAL1-203ENST00000392128 HS3ST1O14792 307 aa9.68□□□□□ -0.86
SMARCAL1-203ENST00000392128 OR2H2O95918 312 aa9.68□□□□□ -0.86
SMARCAL1-203ENST00000392128 CD34P28906 385 aa9.68□□□□□ -0.86
SMARCAL1-203ENST00000392128 ASCL1P50553 236 aa9.68□□□□□ -0.86
SMARCAL1-203ENST00000392128 C2orf68Q2NKX9 166 aa9.68□□□□□ -0.86
SMARCAL1-203ENST00000392128 VHLLQ6RSH7 139 aa9.68□□□□□ -0.86
SMARCAL1-203ENST00000392128 ZNF826PQ6ZT77 177 aa9.68□□□□□ -0.86
SMARCAL1-203ENST00000392128 OR2T35Q8NGX2 323 aa9.68□□□□□ -0.86
SMARCAL1-203ENST00000392128 MRPL30Q8TCC3 161 aaKnown RBP9.68□□□□□ -0.86
SMARCAL1-203ENST00000392128 RDH5Q92781 318 aa9.68□□□□□ -0.86
SMARCAL1-203ENST00000392128 TMEM230Q96A57 120 aa9.68□□□□□ -0.86
SMARCAL1-203ENST00000392128 SYT3Q9BQG1 590 aa9.68□□□□□ -0.86
SMARCAL1-203ENST00000392128 AIFM2Q9BRQ8 373 aa9.68□□□□□ -0.86
SMARCAL1-203ENST00000392128 PCNX1Q96RV3 2341 aa9.68□□□□□ -0.86
SMARCAL1-203ENST00000392128 KIR2DS1A0A191URI9 304 aa9.67□□□□□ -0.86
SMARCAL1-203ENST00000392128 PLSCR5A0PG75 271 aa9.67□□□□□ -0.86
SMARCAL1-203ENST00000392128 DPRXA6NFQ7 191 aa9.67□□□□□ -0.86
SMARCAL1-203ENST00000392128 G3V3Q6 166 aa9.67□□□□□ -0.86
SMARCAL1-203ENST00000392128 GOSR2O14653 212 aa9.67□□□□□ -0.86
SMARCAL1-203ENST00000392128 SH2D1BO14796 132 aa9.67□□□□□ -0.86
SMARCAL1-203ENST00000392128 SLC22A5O76082 557 aa9.67□□□□□ -0.86
SMARCAL1-203ENST00000392128 DUS4LO95620 317 aaKnown RBP9.67□□□□□ -0.86
SMARCAL1-203ENST00000392128 KIR2DS4P43632 304 aa9.67□□□□□ -0.86
SMARCAL1-203ENST00000392128 H2BFSP57053 126 aa9.67□□□□□ -0.86
SMARCAL1-203ENST00000392128 SELENOVP59797 346 aa9.67□□□□□ -0.86
SMARCAL1-203ENST00000392128 BAMBIQ13145 260 aa9.67□□□□□ -0.86
SMARCAL1-203ENST00000392128 KIR2DS1Q14954 304 aa9.67□□□□□ -0.86
SMARCAL1-203ENST00000392128 FBXL19-AS1Q494R0 122 aa9.67□□□□□ -0.86
SMARCAL1-203ENST00000392128 ZNF880Q6PDB4 577 aa9.67□□□□□ -0.86
SMARCAL1-203ENST00000392128 UXS1Q8NBZ7 420 aa9.67□□□□□ -0.86
SMARCAL1-203ENST00000392128 MRPL24Q96A35 216 aaKnown RBP9.67□□□□□ -0.86
SMARCAL1-203ENST00000392128 PHB2Q99623 299 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms