RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 DMRTA1Q5VZB9 504 aa14.31□□□□□ -0.12
SHANK1-204ENST00000391814 SLC35E3Q7Z769 313 aa14.31□□□□□ -0.12
SHANK1-204ENST00000391814 PCGF1Q9BSM1 259 aa14.31□□□□□ -0.12
SHANK1-204ENST00000391814 KIF13BQ9NQT8 1826 aa14.31□□□□□ -0.12
SHANK1-204ENST00000391814 UBE2L3P68036 154 aaKnown RBP14.31□□□□□ -0.12
SHANK1-204ENST00000391814 ALKBH3Q96Q83 286 aaPredicted RBP14.31□□□□□ -0.12
SHANK1-204ENST00000391814 RSG1Q9BU20 258 aa14.31□□□□□ -0.12
SHANK1-204ENST00000391814 HS3ST3A1Q9Y663 406 aa14.31□□□□□ -0.12
SHANK1-204ENST00000391814 P01737 135 aa14.31□□□□□ -0.12
SHANK1-204ENST00000391814 NGFP01138 241 aa14.31□□□□□ -0.12
SHANK1-204ENST00000391814 SMIM21Q3B7S5 101 aa14.31□□□□□ -0.12
SHANK1-204ENST00000391814 PDPNQ86YL7 162 aa14.31□□□□□ -0.12
SHANK1-204ENST00000391814 FZR1Q9UM11 496 aa14.31□□□□□ -0.12
SHANK1-204ENST00000391814 C7orf66A4D0T2 115 aa14.3□□□□□ -0.12
SHANK1-204ENST00000391814 ATP6V0CP27449 155 aa14.3□□□□□ -0.12
SHANK1-204ENST00000391814 FBXO46Q6PJ61 603 aaPredicted RBP14.3□□□□□ -0.12
SHANK1-204ENST00000391814 FOXJ2Q9P0K8 574 aa14.3□□□□□ -0.12
SHANK1-204ENST00000391814 CYR61O00622 381 aa14.3□□□□□ -0.12
SHANK1-204ENST00000391814 WDR25Q64LD2 544 aaPredicted RBP14.3□□□□□ -0.12
SHANK1-204ENST00000391814 C17orf99Q6UX52 265 aa14.3□□□□□ -0.12
SHANK1-204ENST00000391814 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.3□□□□□ -0.12
SHANK1-204ENST00000391814 MOB3BQ86TA1 216 aa14.3□□□□□ -0.12
SHANK1-204ENST00000391814 CDCA3Q99618 268 aaPredicted RBP14.3□□□□□ -0.12
SHANK1-204ENST00000391814 RREB1Q92766 1687 aa14.3□□□□□ -0.12
SHANK1-204ENST00000391814 ACER2Q5QJU3 275 aa14.3□□□□□ -0.12
SHANK1-204ENST00000391814 RTL10Q7L3V2 364 aa14.3□□□□□ -0.12
SHANK1-204ENST00000391814 NAT6Q93015 286 aa14.3□□□□□ -0.12
SHANK1-204ENST00000391814 TMEM167BQ9NRX6 74 aa14.3□□□□□ -0.12
SHANK1-204ENST00000391814 LTBP3Q9NS15 1303 aa14.3□□□□□ -0.12
SHANK1-204ENST00000391814 HOXD4P09016 255 aaPredicted RBP14.3□□□□□ -0.12
SHANK1-204ENST00000391814 VASH2Q86V25 355 aa14.3□□□□□ -0.12
SHANK1-204ENST00000391814 GAPTQ8N292 157 aa14.3□□□□□ -0.12
SHANK1-204ENST00000391814 ALG14Q96F25 216 aa14.3□□□□□ -0.12
SHANK1-204ENST00000391814 OCIAD1Q9NX40 245 aa14.3□□□□□ -0.12
SHANK1-204ENST00000391814 CORTO00230 105 aa14.3□□□□□ -0.12
SHANK1-204ENST00000391814 SYNGR2O43760 224 aa14.3□□□□□ -0.12
SHANK1-204ENST00000391814 FABP2P12104 132 aa14.3□□□□□ -0.12
SHANK1-204ENST00000391814 BRS3P32247 399 aa14.3□□□□□ -0.12
SHANK1-204ENST00000391814 ID4P47928 161 aa14.3□□□□□ -0.12
SHANK1-204ENST00000391814 PRSS12P56730 875 aa14.3□□□□□ -0.12
SHANK1-204ENST00000391814 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.3□□□□□ -0.12
SHANK1-204ENST00000391814 LINC00469Q8N7U9 141 aa14.3□□□□□ -0.12
SHANK1-204ENST00000391814 C5orf17Q8NAS9 161 aa14.3□□□□□ -0.12
SHANK1-204ENST00000391814 OR8B12Q8NGG6 310 aa14.3□□□□□ -0.12
SHANK1-204ENST00000391814 MRPL30Q8TCC3 161 aaKnown RBP14.3□□□□□ -0.12
SHANK1-204ENST00000391814 SSMEM1Q8WWF3 244 aa14.3□□□□□ -0.12
SHANK1-204ENST00000391814 MRPL37Q9BZE1 423 aaKnown RBP14.3□□□□□ -0.12
SHANK1-204ENST00000391814 MPLP40238 635 aa14.29□□□□□ -0.12
SHANK1-204ENST00000391814 LYZP61626 148 aa14.29□□□□□ -0.12
SHANK1-204ENST00000391814 ADAMTS17Q8TE56 1095 aa14.29□□□□□ -0.12
SHANK1-204ENST00000391814 SARGQ9BW04 601 aa14.29□□□□□ -0.12
SHANK1-204ENST00000391814 PIPOXQ9P0Z9 390 aa14.29□□□□□ -0.12
SHANK1-204ENST00000391814 SEC11BP0C7V7 166 aa14.29□□□□□ -0.12
SHANK1-204ENST00000391814 CDX1P47902 265 aaPredicted RBP14.29□□□□□ -0.12
SHANK1-204ENST00000391814 ZNF770Q6IQ21 691 aaPredicted RBP14.29□□□□□ -0.12
SHANK1-204ENST00000391814 WDFY1Q8IWB7 410 aa14.29□□□□□ -0.12
SHANK1-204ENST00000391814 ARL6IP6Q8N6S5 226 aa14.29□□□□□ -0.12
SHANK1-204ENST00000391814 LRRC75AQ8NAA5 344 aa14.29□□□□□ -0.12
SHANK1-204ENST00000391814 ZFP30Q9Y2G7 519 aa14.29□□□□□ -0.12
SHANK1-204ENST00000391814 SSC5DA1L4H1 1573 aa14.29□□□□□ -0.12
SHANK1-204ENST00000391814 TRGV10A0A0A0MS01 117 aa14.29□□□□□ -0.12
SHANK1-204ENST00000391814 PQLC2LA1A4F0 135 aa14.29□□□□□ -0.12
SHANK1-204ENST00000391814 SMPD2O60906 423 aa14.29□□□□□ -0.12
SHANK1-204ENST00000391814 FAM157CP0CG43 387 aa14.29□□□□□ -0.12
SHANK1-204ENST00000391814 TMEM50BP56557 158 aa14.29□□□□□ -0.12
SHANK1-204ENST00000391814 CD226Q15762 336 aa14.29□□□□□ -0.12
SHANK1-204ENST00000391814 ZNF547Q8IVP9 402 aa14.29□□□□□ -0.12
SHANK1-204ENST00000391814 WDR31Q8NA23 367 aa14.29□□□□□ -0.12
SHANK1-204ENST00000391814 SCN7AQ01118 1682 aa14.29□□□□□ -0.12
SHANK1-204ENST00000391814 HOXA6P31267 233 aa14.29□□□□□ -0.12
SHANK1-204ENST00000391814 MPTX1A8MV57 137 aa14.29□□□□□ -0.12
SHANK1-204ENST00000391814 J3KRW8 73 aa14.29□□□□□ -0.12
SHANK1-204ENST00000391814 CD1BP29016 333 aa14.29□□□□□ -0.12
SHANK1-204ENST00000391814 CEACAM16Q2WEN9 425 aa14.29□□□□□ -0.12
SHANK1-204ENST00000391814 Q5PR19 223 aa14.29□□□□□ -0.12
SHANK1-204ENST00000391814 OR11H4Q8NGC9 324 aa14.29□□□□□ -0.12
SHANK1-204ENST00000391814 MDH2P40926 338 aaKnown RBP14.28□□□□□ -0.12
SHANK1-204ENST00000391814 KIR2DS2P43631 304 aa14.28□□□□□ -0.12
SHANK1-204ENST00000391814 SPPL3Q8TCT6 385 aa14.28□□□□□ -0.12
SHANK1-204ENST00000391814 LINC00615Q96LM1 132 aaPredicted RBP14.28□□□□□ -0.12
SHANK1-204ENST00000391814 TLNRD1Q9H1K6 362 aa14.28□□□□□ -0.12
SHANK1-204ENST00000391814 GHITMQ9H3K2 345 aa14.28□□□□□ -0.12
SHANK1-204ENST00000391814 MYH14Q7Z406 1995 aaKnown RBP14.28□□□□□ -0.12
SHANK1-204ENST00000391814 RECKO95980 971 aa14.28□□□□□ -0.12
SHANK1-204ENST00000391814 IGHV3-13P01766 116 aa14.28□□□□□ -0.12
SHANK1-204ENST00000391814 IGHV3-7P01780 117 aa14.28□□□□□ -0.12
SHANK1-204ENST00000391814 SLC35B1P78383 322 aa14.28□□□□□ -0.12
SHANK1-204ENST00000391814 AESQ08117 197 aa14.28□□□□□ -0.12
SHANK1-204ENST00000391814 ZNF774Q6NX45 483 aa14.28□□□□□ -0.12
SHANK1-204ENST00000391814 RPS19BP1Q86WX3 136 aaKnown RBP14.28□□□□□ -0.12
SHANK1-204ENST00000391814 KMT5CQ86Y97 462 aa14.28□□□□□ -0.12
SHANK1-204ENST00000391814 TUSC5Q8IXB3 177 aa14.28□□□□□ -0.12
SHANK1-204ENST00000391814 C10orf111Q8N326 155 aa14.28□□□□□ -0.12
SHANK1-204ENST00000391814 TMEM178AQ8NBL3 297 aa14.28□□□□□ -0.12
SHANK1-204ENST00000391814 HCFC2Q9Y5Z7 792 aa14.28□□□□□ -0.12
SHANK1-204ENST00000391814 NRXN3Q9Y4C0 1643 aa14.28□□□□□ -0.12
SHANK1-204ENST00000391814 SPINK2P20155 84 aa14.28□□□□□ -0.12
SHANK1-204ENST00000391814 PRICKLE4Q2TBC4 344 aa14.28□□□□□ -0.12
SHANK1-204ENST00000391814 TMEM56Q96MV1 263 aa14.28□□□□□ -0.12
SHANK1-204ENST00000391814 FOXB1Q99853 325 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms