RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 LOC389332A0A1B0GUA5 103 aa-1.17□□□□□ -2.6
RNU6-239P-201ENST00000390990 J3QT63 122 aa-1.17□□□□□ -2.6
RNU6-239P-201ENST00000390990 UPK1BO75841 260 aa-1.17□□□□□ -2.6
RNU6-239P-201ENST00000390990 BAG2O95816 211 aa-1.17□□□□□ -2.6
RNU6-239P-201ENST00000390990 CD160O95971 181 aa-1.17□□□□□ -2.6
RNU6-239P-201ENST00000390990 RFC3P40938 356 aa-1.17□□□□□ -2.6
RNU6-239P-201ENST00000390990 LAMTOR4Q0VGL1 99 aa-1.17□□□□□ -2.6
RNU6-239P-201ENST00000390990 MRPL23Q16540 153 aaKnown RBP-1.17□□□□□ -2.6
RNU6-239P-201ENST00000390990 SLC8B1Q6J4K2 584 aa-1.17□□□□□ -2.6
RNU6-239P-201ENST00000390990 TTC23LQ6PF05 361 aa-1.17□□□□□ -2.6
RNU6-239P-201ENST00000390990 GLT6D1Q7Z4J2 308 aa-1.17□□□□□ -2.6
RNU6-239P-201ENST00000390990 VKORC1L1Q8N0U8 176 aa-1.17□□□□□ -2.6
RNU6-239P-201ENST00000390990 ZNF436Q9C0F3 470 aaPredicted RBP-1.17□□□□□ -2.6
RNU6-239P-201ENST00000390990 CLEC4AQ9UMR7 237 aa-1.17□□□□□ -2.6
RNU6-239P-201ENST00000390990 SNURFQ9Y675 71 aa-1.17□□□□□ -2.6
RNU6-239P-201ENST00000390990 PTPRJQ12913 1337 aa-1.17□□□□□ -2.6
RNU6-239P-201ENST00000390990 UBN2Q6ZU65 1347 aa-1.17□□□□□ -2.6
RNU6-239P-201ENST00000390990 PTPRBP23467 1997 aa-1.17□□□□□ -2.6
RNU6-239P-201ENST00000390990 PIEZO1Q92508 2521 aa-1.18□□□□□ -2.6
RNU6-239P-201ENST00000390990 GOLGA8JA6NMD2 632 aa-1.18□□□□□ -2.6
RNU6-239P-201ENST00000390990 MAGEB3O15480 346 aa-1.18□□□□□ -2.6
RNU6-239P-201ENST00000390990 GNRH2O43555 120 aa-1.18□□□□□ -2.6
RNU6-239P-201ENST00000390990 IGKV5-2P06315 115 aa-1.18□□□□□ -2.6
RNU6-239P-201ENST00000390990 GOLGA8HP0CJ92 632 aa-1.18□□□□□ -2.6
RNU6-239P-201ENST00000390990 TNNI1P19237 187 aa-1.18□□□□□ -2.6
RNU6-239P-201ENST00000390990 NCF2P19878 526 aaPredicted RBP-1.18□□□□□ -2.6
RNU6-239P-201ENST00000390990 MX1P20591 662 aa-1.18□□□□□ -2.6
RNU6-239P-201ENST00000390990 P2RY2P41231 377 aa-1.18□□□□□ -2.6
RNU6-239P-201ENST00000390990 AIF1P55008 147 aa-1.18□□□□□ -2.6
RNU6-239P-201ENST00000390990 PLTPP55058 493 aa-1.18□□□□□ -2.6
RNU6-239P-201ENST00000390990 TFDP2Q14188 446 aa-1.18□□□□□ -2.6
RNU6-239P-201ENST00000390990 RPEL1Q2QD12 228 aa-1.18□□□□□ -2.6
RNU6-239P-201ENST00000390990 TMEM42Q69YG0 159 aa-1.18□□□□□ -2.6
RNU6-239P-201ENST00000390990 RWDD4Q6NW29 188 aaKnown RBP-1.18□□□□□ -2.6
RNU6-239P-201ENST00000390990 CLEC19AQ6UXS0 136 aa-1.18□□□□□ -2.6
RNU6-239P-201ENST00000390990 RPS19BP1Q86WX3 136 aaKnown RBP-1.18□□□□□ -2.6
RNU6-239P-201ENST00000390990 OR4A4PQ8NGN8 299 aa-1.18□□□□□ -2.6
RNU6-239P-201ENST00000390990 ZYG11BQ9C0D3 744 aa-1.18□□□□□ -2.6
RNU6-239P-201ENST00000390990 SMDT1Q9H4I9 107 aa-1.18□□□□□ -2.6
RNU6-239P-201ENST00000390990 PLEKHA1Q9HB21 404 aa-1.18□□□□□ -2.6
RNU6-239P-201ENST00000390990 TMEM165Q9HC07 324 aa-1.18□□□□□ -2.6
RNU6-239P-201ENST00000390990 PTTG3PQ9NZH4 202 aa-1.18□□□□□ -2.6
RNU6-239P-201ENST00000390990 RCL1Q9Y2P8 373 aaKnown RBP-1.18□□□□□ -2.6
RNU6-239P-201ENST00000390990 IGHV1-45A0A0A0MS14 117 aa-1.19□□□□□ -2.6
RNU6-239P-201ENST00000390990 TRAV41A0A0B4J266 112 aa-1.19□□□□□ -2.6
RNU6-239P-201ENST00000390990 ANGPT2O15123 496 aa-1.19□□□□□ -2.6
RNU6-239P-201ENST00000390990 CIAO1O76071 339 aa-1.19□□□□□ -2.6
RNU6-239P-201ENST00000390990 CLTAP09496 248 aa-1.19□□□□□ -2.6
RNU6-239P-201ENST00000390990 NQO1P15559 274 aaKnown RBP-1.19□□□□□ -2.6
RNU6-239P-201ENST00000390990 CD200P41217 278 aa-1.19□□□□□ -2.6
RNU6-239P-201ENST00000390990 HCCSP53701 268 aa-1.19□□□□□ -2.6
RNU6-239P-201ENST00000390990 CFAP157Q5JU67 520 aa-1.19□□□□□ -2.6
RNU6-239P-201ENST00000390990 SPATA31B1PQ5VZV4 182 aa-1.19□□□□□ -2.6
RNU6-239P-201ENST00000390990 GLYATQ6IB77 296 aa-1.19□□□□□ -2.6
RNU6-239P-201ENST00000390990 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP-1.19□□□□□ -2.6
RNU6-239P-201ENST00000390990 ASCC1Q8N9N2 400 aaKnown RBP-1.19□□□□□ -2.6
RNU6-239P-201ENST00000390990 C14orf166Q9Y224 244 aaKnown RBP-1.19□□□□□ -2.6
RNU6-239P-201ENST00000390990 LRP2P98164 4655 aa-1.19□□□□□ -2.6
RNU6-239P-201ENST00000390990 WDR19Q8NEZ3 1342 aa-1.19□□□□□ -2.6
RNU6-239P-201ENST00000390990 A0A0B4J2E0 115 aa-1.2□□□□□ -2.6
RNU6-239P-201ENST00000390990 SLC5A10A0PJK1 596 aa-1.2□□□□□ -2.6
RNU6-239P-201ENST00000390990 C2orf74A8MZ97 194 aa-1.2□□□□□ -2.6
RNU6-239P-201ENST00000390990 K7EPI3 171 aa-1.2□□□□□ -2.6
RNU6-239P-201ENST00000390990 CTSEP14091 401 aa-1.2□□□□□ -2.6
RNU6-239P-201ENST00000390990 RAB10P61026 200 aa-1.2□□□□□ -2.6
RNU6-239P-201ENST00000390990 TSPAN31Q12999 210 aa-1.2□□□□□ -2.6
RNU6-239P-201ENST00000390990 MMDQ15546 238 aa-1.2□□□□□ -2.6
RNU6-239P-201ENST00000390990 Q1T7F1 81 aa-1.2□□□□□ -2.6
RNU6-239P-201ENST00000390990 TRMT5Q32P41 509 aaKnown RBP-1.2□□□□□ -2.6
RNU6-239P-201ENST00000390990 UBE2NLQ5JXB2 153 aa-1.2□□□□□ -2.6
RNU6-239P-201ENST00000390990 PMF1Q6P1K2 205 aa-1.2□□□□□ -2.6
RNU6-239P-201ENST00000390990 RNASEKQ6P5S7 137 aaKnown RBP-1.2□□□□□ -2.6
RNU6-239P-201ENST00000390990 SPESP1Q6UW49 350 aa-1.2□□□□□ -2.6
RNU6-239P-201ENST00000390990 TMEM107Q6UX40 140 aa-1.2□□□□□ -2.6
RNU6-239P-201ENST00000390990 KRTCAP2Q8N6L1 136 aa-1.2□□□□□ -2.6
RNU6-239P-201ENST00000390990 KCTD4Q8WVF5 259 aa-1.2□□□□□ -2.6
RNU6-239P-201ENST00000390990 RCN3Q96D15 328 aa-1.2□□□□□ -2.6
RNU6-239P-201ENST00000390990 SCGB3A2Q96PL1 93 aa-1.2□□□□□ -2.6
RNU6-239P-201ENST00000390990 GON7Q9BXV9 100 aa-1.2□□□□□ -2.6
RNU6-239P-201ENST00000390990 ALX4Q9H161 411 aaPredicted RBP-1.2□□□□□ -2.6
RNU6-239P-201ENST00000390990 CST9LQ9H4G1 147 aa-1.2□□□□□ -2.6
RNU6-239P-201ENST00000390990 REEP1Q9H902 201 aa-1.2□□□□□ -2.6
RNU6-239P-201ENST00000390990 DBNDD1Q9H9R9 158 aa-1.2□□□□□ -2.6
RNU6-239P-201ENST00000390990 DSCAML1Q8TD84 2053 aa-1.2□□□□□ -2.6
RNU6-239P-201ENST00000390990 POLR3AO14802 1390 aaPredicted RBP-1.21□□□□□ -2.6
RNU6-239P-201ENST00000390990 TRAV8-4A0A0B4J246 113 aa-1.21□□□□□ -2.6
RNU6-239P-201ENST00000390990 MDFIC2A0A1B0GVS7 189 aa-1.21□□□□□ -2.6
RNU6-239P-201ENST00000390990 H3BPC8 53 aa-1.21□□□□□ -2.6
RNU6-239P-201ENST00000390990 EIF3HO15372 352 aaKnown RBP eCLIP-1.21□□□□□ -2.6
RNU6-239P-201ENST00000390990 P01737 135 aa-1.21□□□□□ -2.6
RNU6-239P-201ENST00000390990 OR4A8P0C604 315 aa-1.21□□□□□ -2.6
RNU6-239P-201ENST00000390990 SCGB1C2P0DMR2 95 aa-1.21□□□□□ -2.6
RNU6-239P-201ENST00000390990 RRM2P31350 389 aa-1.21□□□□□ -2.6
RNU6-239P-201ENST00000390990 ACAA2P42765 397 aaKnown RBP-1.21□□□□□ -2.6
RNU6-239P-201ENST00000390990 ACTR1AP61163 376 aa-1.21□□□□□ -2.6
RNU6-239P-201ENST00000390990 GLO1Q04760 184 aa-1.21□□□□□ -2.6
RNU6-239P-201ENST00000390990 SCGB1C1Q8TD33 95 aa-1.21□□□□□ -2.6
RNU6-239P-201ENST00000390990 MBD3L1Q8WWY6 194 aa-1.21□□□□□ -2.6
RNU6-239P-201ENST00000390990 AGMATQ9BSE5 352 aa-1.21□□□□□ -2.6
RNU6-239P-201ENST00000390990 ULBP1Q9BZM6 244 aa-1.21□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms