RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 CEACAM21Q3KPI0 293 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 KLHL12Q53G59 568 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 CARD16Q5EG05 197 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 CPTPQ5TA50 214 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 ELP2Q6IA86 826 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 RPL13AP3Q6NVV1 102 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 MBOAT2Q6ZWT7 520 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 SLC36A1Q7Z2H8 476 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 NIT1Q86X76 327 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 CPNE9Q8IYJ1 553 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 MREGQ8N565 214 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 TMEM161BQ8NDZ6 487 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 GPR32P1Q8NGA4 272 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 OR52H1Q8NGJ2 320 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 OR9A2Q8NGT5 310 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 OR13D1Q8NGV5 346 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 OR6K6Q8NGW6 343 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 OR10K1Q8NGX5 313 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 OR2G3Q8NGZ4 309 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 SFXN5Q8TD22 340 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 C16orf78Q8WTQ4 265 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 CASTOR1Q8WTX7 329 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 ZCCHC13Q8WW36 166 aaKnown RBP1.36□□□□□ -2.19
TRAV40-201ENST00000390467 RGP1Q92546 391 aaPredicted RBP1.36□□□□□ -2.19
TRAV40-201ENST00000390467 RERGQ96A58 199 aaPredicted RBP1.36□□□□□ -2.19
TRAV40-201ENST00000390467 NEURL3Q96EH8 262 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 MRPL48Q96GC5 212 aaKnown RBP1.36□□□□□ -2.19
TRAV40-201ENST00000390467 SEC22AQ96IW7 307 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 ADTRPQ96IZ2 230 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 QKIQ96PU8 341 aaKnown RBP eCLIP1.36□□□□□ -2.19
TRAV40-201ENST00000390467 OR5B12Q96R08 314 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 APOL4Q9BPW4 351 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 AIF1LQ9BQI0 150 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 TMEM208Q9BTX3 173 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 CHAC1Q9BUX1 264 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 NUDT9Q9BW91 350 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 RAB34Q9BZG1 259 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 ACTR6Q9GZN1 396 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 UBE2ZQ9H832 354 aaPredicted RBP1.36□□□□□ -2.19
TRAV40-201ENST00000390467 UGT1A8Q9HAW9 530 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 C6orf50Q9HD87 102 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 FBXO6Q9NRD1 293 aaPredicted RBP1.36□□□□□ -2.19
TRAV40-201ENST00000390467 HRASLS2Q9NWW9 162 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 VPREB3Q9UKI3 123 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 HHLA2Q9UM44 414 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 KCNIP3Q9Y2W7 256 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 RPL36Q9Y3U8 105 aaKnown RBP1.36□□□□□ -2.19
TRAV40-201ENST00000390467 NFASCO94856 1347 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 PCF11O94913 1555 aaKnown RBP1.35□□□□□ -2.19
TRAV40-201ENST00000390467 IGLV1-50A0A075B6I6 118 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 IGLV3-12A0A075B6K2 115 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 TGIF2-C20orf24A0A0A6YYL0 155 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 A0A1B0GVG6 124 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 A0A1B0GW55 424 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 PVALEFA0A1B0GWK0 134 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 VPS37CA5D8V6 355 aaPredicted RBP1.35□□□□□ -2.19
TRAV40-201ENST00000390467 OR6C6A6NF89 314 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 OR5B21A6NL26 309 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 HACD1B0YJ81 288 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 K7EMT4 169 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 K7EP13 123 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 BHLHE40O14503 412 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 RBFOX2O43251 390 aaKnown RBP eCLIP1.35□□□□□ -2.19
TRAV40-201ENST00000390467 ERI3O43414 337 aaKnown RBP1.35□□□□□ -2.19
TRAV40-201ENST00000390467 CHP2O43745 196 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 SOX15O60248 233 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 EEDO75530 441 aaKnown RBP1.35□□□□□ -2.19
TRAV40-201ENST00000390467 SERPINB7O75635 380 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 EIF3GO75821 320 aaKnown RBP eCLIP1.35□□□□□ -2.19
TRAV40-201ENST00000390467 TTC4O95801 387 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 IFNGP01579 166 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 CD8AP01732 235 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 BGLAPP02818 100 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 RLN2P04090 185 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 FBP1P09467 338 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 ACSM4P0C7M7 580 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 FAM228BP0C875 321 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 DUX4L2P0CJ85 424 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 DUX4L3P0CJ86 424 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 DUX4L5P0CJ88 424 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 DUX4L6P0CJ89 424 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 DUX4L7P0CJ90 424 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 C1GALT1C1LP0DN25 315 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 LIPCP11150 499 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 COX4I1P13073 169 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 TCN2P20062 427 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 PVALBP20472 110 aaPredicted RBP1.35□□□□□ -2.19
TRAV40-201ENST00000390467 CA5AP35218 305 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 RAB13P51153 203 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 HCCSP53701 268 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 FBXW4P57775 412 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 TAS2R41P59536 307 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 RAB8AP61006 207 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 NUTF2P61970 127 aaKnown RBP1.35□□□□□ -2.19
TRAV40-201ENST00000390467 PAFAH1B2P68402 229 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 CD164Q04900 197 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 FAM53BQ14153 422 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 OR1Q1Q15612 314 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 PSMD5Q16401 504 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 C4orf26Q17RF5 130 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms