RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 TSPAN12O95859 305 aa13.73□□□□□ -0.21
ALK-201ENST00000389048 CXCL3P19876 107 aa13.73□□□□□ -0.21
ALK-201ENST00000389048 KLF3P57682 345 aaPredicted RBP13.73□□□□□ -0.21
ALK-201ENST00000389048 FOXO1Q12778 655 aa13.73□□□□□ -0.21
ALK-201ENST00000389048 INHBBP09529 407 aa13.73□□□□□ -0.21
ALK-201ENST00000389048 SCGB1A1P11684 91 aa13.73□□□□□ -0.21
ALK-201ENST00000389048 PRRX1P54821 245 aa13.73□□□□□ -0.21
ALK-201ENST00000389048 SEC11CQ9BY50 192 aa13.73□□□□□ -0.21
ALK-201ENST00000389048 CTSVO60911 334 aa13.73□□□□□ -0.21
ALK-201ENST00000389048 COL8A1P27658 744 aa13.73□□□□□ -0.21
ALK-201ENST00000389048 PIGYQ3MUY2 71 aa13.73□□□□□ -0.21
ALK-201ENST00000389048 GAPTQ8N292 157 aa13.73□□□□□ -0.21
ALK-201ENST00000389048 IGHV3OR16-12A0A075B7B8 117 aa13.73□□□□□ -0.21
ALK-201ENST00000389048 K7EQS6 105 aa13.73□□□□□ -0.21
ALK-201ENST00000389048 DLX1P56177 255 aa13.73□□□□□ -0.21
ALK-201ENST00000389048 OR1N2Q8NGR9 330 aa13.73□□□□□ -0.21
ALK-201ENST00000389048 OR2T10Q8NGZ9 312 aa13.73□□□□□ -0.21
ALK-201ENST00000389048 FAM222BQ8WU58 562 aa13.73□□□□□ -0.21
ALK-201ENST00000389048 LRRC37A3O60309 1634 aa13.73□□□□□ -0.21
ALK-201ENST00000389048 APCSP02743 223 aa13.72□□□□□ -0.21
ALK-201ENST00000389048 PGA3P0DJD8 388 aa13.72□□□□□ -0.21
ALK-201ENST00000389048 MMP9P14780 707 aa13.72□□□□□ -0.21
ALK-201ENST00000389048 GABRG2P18507 467 aa13.72□□□□□ -0.21
ALK-201ENST00000389048 LGALS7P47929 136 aa13.72□□□□□ -0.21
ALK-201ENST00000389048 MOGAT3Q86VF5 341 aa13.72□□□□□ -0.21
ALK-201ENST00000389048 RND1Q92730 232 aa13.72□□□□□ -0.21
ALK-201ENST00000389048 GRAMD2BQ96HH9 432 aa13.72□□□□□ -0.21
ALK-201ENST00000389048 MYO9BQ13459 2157 aa13.72□□□□□ -0.21
ALK-201ENST00000389048 CCR5P51681 352 aa13.72□□□□□ -0.21
ALK-201ENST00000389048 SSBP1Q04837 148 aaKnown RBP13.72□□□□□ -0.21
ALK-201ENST00000389048 TWIST1Q15672 202 aa13.72□□□□□ -0.21
ALK-201ENST00000389048 PRICKLE4Q2TBC4 344 aa13.72□□□□□ -0.21
ALK-201ENST00000389048 BSXQ3C1V8 233 aa13.72□□□□□ -0.21
ALK-201ENST00000389048 C9orf50Q5SZB4 431 aa13.72□□□□□ -0.21
ALK-201ENST00000389048 SPSB1Q96BD6 273 aa13.72□□□□□ -0.21
ALK-201ENST00000389048 RAB33BQ9H082 229 aa13.72□□□□□ -0.21
ALK-201ENST00000389048 MTFP1Q9UDX5 166 aa13.72□□□□□ -0.21
ALK-201ENST00000389048 CTLA4P16410 223 aa13.72□□□□□ -0.21
ALK-201ENST00000389048 OTX1P32242 354 aaPredicted RBP13.72□□□□□ -0.21
ALK-201ENST00000389048 FAM53BQ14153 422 aa13.72□□□□□ -0.21
ALK-201ENST00000389048 NSUN5P2Q63ZY6 315 aa13.72□□□□□ -0.21
ALK-201ENST00000389048 CBLN3Q6UW01 205 aa13.72□□□□□ -0.21
ALK-201ENST00000389048 ZNF502Q8TBZ5 544 aa13.72□□□□□ -0.21
ALK-201ENST00000389048 RPP25Q9BUL9 199 aaKnown RBP13.72□□□□□ -0.21
ALK-201ENST00000389048 OR2J1Q9GZK6 312 aa13.72□□□□□ -0.21
ALK-201ENST00000389048 Q9N2K0 584 aa13.72□□□□□ -0.21
ALK-201ENST00000389048 PRSS50Q9UI38 385 aa13.72□□□□□ -0.21
ALK-201ENST00000389048 GNG7O60262 68 aa13.72□□□□□ -0.21
ALK-201ENST00000389048 SOX8P57073 446 aa13.72□□□□□ -0.21
ALK-201ENST00000389048 CD81P60033 236 aa13.72□□□□□ -0.21
ALK-201ENST00000389048 OR10G8Q8NGN5 311 aa13.72□□□□□ -0.21
ALK-201ENST00000389048 ABHD1Q96SE0 405 aa13.72□□□□□ -0.21
ALK-201ENST00000389048 PLPP3O14495 311 aa13.72□□□□□ -0.21
ALK-201ENST00000389048 ATP6V1FQ16864 119 aa13.72□□□□□ -0.21
ALK-201ENST00000389048 OR4A47Q6IF82 309 aa13.72□□□□□ -0.21
ALK-201ENST00000389048 CLEC18BQ6UXF7 455 aa13.72□□□□□ -0.21
ALK-201ENST00000389048 ADAT3Q96EY9 351 aaPredicted RBP13.72□□□□□ -0.21
ALK-201ENST00000389048 FXYD1O00168 92 aa13.71□□□□□ -0.21
ALK-201ENST00000389048 CDC42EP2O14613 210 aa13.71□□□□□ -0.21
ALK-201ENST00000389048 OR4X1Q8NH49 305 aa13.71□□□□□ -0.21
ALK-201ENST00000389048 FAHD2AQ96GK7 314 aa13.71□□□□□ -0.21
ALK-201ENST00000389048 ZNF275Q9NSD4 429 aaPredicted RBP13.71□□□□□ -0.21
ALK-201ENST00000389048 RGPD5Q99666 1765 aa13.71□□□□□ -0.21
ALK-201ENST00000389048 SNURFLB1AK76 121 aa13.71□□□□□ -0.21
ALK-201ENST00000389048 PLPP2O43688 288 aa13.71□□□□□ -0.21
ALK-201ENST00000389048 SRFP11831 508 aa13.71□□□□□ -0.21
ALK-201ENST00000389048 RCC1P18754 421 aaPredicted RBP13.71□□□□□ -0.21
ALK-201ENST00000389048 GFRA1P56159 465 aa13.71□□□□□ -0.21
ALK-201ENST00000389048 OR13G1Q8NGZ3 307 aa13.71□□□□□ -0.21
ALK-201ENST00000389048 STARD4Q96DR4 205 aa13.71□□□□□ -0.21
ALK-201ENST00000389048 CCL28Q9NRJ3 127 aa13.71□□□□□ -0.21
ALK-201ENST00000389048 BTF3P20290 206 aaKnown RBP13.71□□□□□ -0.21
ALK-201ENST00000389048 PRSS54Q6PEW0 395 aa13.71□□□□□ -0.21
ALK-201ENST00000389048 SLC23A3Q6PIS1 610 aa13.71□□□□□ -0.21
ALK-201ENST00000389048 LDLRAD3Q86YD5 345 aa13.71□□□□□ -0.21
ALK-201ENST00000389048 IGLV3-27P01718 113 aa13.71□□□□□ -0.21
ALK-201ENST00000389048 OR5AU1Q8NGC0 362 aa13.71□□□□□ -0.21
ALK-201ENST00000389048 PTPMT1Q8WUK0 201 aaPredicted RBP13.71□□□□□ -0.21
ALK-201ENST00000389048 HDHD3Q9BSH5 251 aaPredicted RBP13.71□□□□□ -0.21
ALK-201ENST00000389048 OR6C3Q9NZP0 311 aa13.71□□□□□ -0.21
ALK-201ENST00000389048 LANCL1O43813 399 aa13.71□□□□□ -0.22
ALK-201ENST00000389048 HERVK_113P61574 105 aa13.71□□□□□ -0.22
ALK-201ENST00000389048 EIF3GO75821 320 aaKnown RBP eCLIP13.7□□□□□ -0.22
ALK-201ENST00000389048 C1QL3Q5VWW1 255 aa13.7□□□□□ -0.22
ALK-201ENST00000389048 DOLPP1Q86YN1 238 aa13.7□□□□□ -0.22
ALK-201ENST00000389048 Q8IYB0 196 aa13.7□□□□□ -0.22
ALK-201ENST00000389048 MRPL24Q96A35 216 aaKnown RBP13.7□□□□□ -0.22
ALK-201ENST00000389048 MRGPRFQ96AM1 343 aa13.7□□□□□ -0.22
ALK-201ENST00000389048 ST6GAL2Q96JF0 529 aa13.7□□□□□ -0.22
ALK-201ENST00000389048 OR2A5Q96R48 311 aa13.7□□□□□ -0.22
ALK-201ENST00000389048 TMUB1Q9BVT8 246 aa13.7□□□□□ -0.22
ALK-201ENST00000389048 CLN8Q9UBY8 286 aa13.7□□□□□ -0.22
ALK-201ENST00000389048 PTX4Q96A99 478 aa13.7□□□□□ -0.22
ALK-201ENST00000389048 TMEM191AQ9H0A3 160 aa13.7□□□□□ -0.22
ALK-201ENST00000389048 CXXC4Q9H2H0 198 aa13.7□□□□□ -0.22
ALK-201ENST00000389048 IFITM10A6NMD0 228 aa13.7□□□□□ -0.22
ALK-201ENST00000389048 F2RL2O00254 374 aa13.7□□□□□ -0.22
ALK-201ENST00000389048 IL13RA2Q14627 380 aa13.7□□□□□ -0.22
ALK-201ENST00000389048 OR4D9Q8NGE8 314 aa13.7□□□□□ -0.22
ALK-201ENST00000389048 MYOZ3Q8TDC0 251 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms