RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 Q9N2K0 584 aa12.85□□□□□ -0.35
SCFD2-201ENST00000388940 KLF13Q9Y2Y9 288 aaPredicted RBP12.85□□□□□ -0.35
SCFD2-201ENST00000388940 TMED3Q9Y3Q3 217 aa12.85□□□□□ -0.35
SCFD2-201ENST00000388940 SHANK1Q9Y566 2161 aa12.85□□□□□ -0.35
SCFD2-201ENST00000388940 ARHGAP21Q5T5U3 1957 aa12.84□□□□□ -0.35
SCFD2-201ENST00000388940 NUPL2O15504 423 aaKnown RBP12.84□□□□□ -0.35
SCFD2-201ENST00000388940 NME2P1O60361 137 aa12.84□□□□□ -0.35
SCFD2-201ENST00000388940 NME2P22392 152 aa12.84□□□□□ -0.35
SCFD2-201ENST00000388940 ARHGDIBP52566 201 aa12.84□□□□□ -0.35
SCFD2-201ENST00000388940 RAB1AP62820 205 aa12.84□□□□□ -0.35
SCFD2-201ENST00000388940 SRPXP78539 464 aa12.84□□□□□ -0.35
SCFD2-201ENST00000388940 SRSF3P84103 164 aaKnown RBP12.84□□□□□ -0.35
SCFD2-201ENST00000388940 IL13RA2Q14627 380 aa12.84□□□□□ -0.35
SCFD2-201ENST00000388940 DPPA2Q7Z7J5 298 aa12.84□□□□□ -0.35
SCFD2-201ENST00000388940 LDLRAD3Q86YD5 345 aa12.84□□□□□ -0.35
SCFD2-201ENST00000388940 SPAG16Q8N0X2 631 aa12.84□□□□□ -0.35
SCFD2-201ENST00000388940 MDS2Q8NDY4 140 aa12.84□□□□□ -0.35
SCFD2-201ENST00000388940 SLAMF9Q96A28 289 aa12.84□□□□□ -0.35
SCFD2-201ENST00000388940 SEC11CQ9BY50 192 aa12.84□□□□□ -0.35
SCFD2-201ENST00000388940 PARP11Q9NR21 331 aa12.84□□□□□ -0.35
SCFD2-201ENST00000388940 FAM74A7A6NL05 159 aa12.84□□□□□ -0.35
SCFD2-201ENST00000388940 CDX4O14627 284 aaPredicted RBP12.84□□□□□ -0.35
SCFD2-201ENST00000388940 GPR137BO60478 399 aa12.84□□□□□ -0.35
SCFD2-201ENST00000388940 RCC1P18754 421 aaPredicted RBP12.84□□□□□ -0.35
SCFD2-201ENST00000388940 P2RY1P47900 373 aa12.84□□□□□ -0.35
SCFD2-201ENST00000388940 KCNJ3P48549 501 aa12.84□□□□□ -0.35
SCFD2-201ENST00000388940 GPM6AP51674 278 aa12.84□□□□□ -0.35
SCFD2-201ENST00000388940 AKR1C2P52895 323 aa12.84□□□□□ -0.35
SCFD2-201ENST00000388940 RND3P61587 244 aa12.84□□□□□ -0.35
SCFD2-201ENST00000388940 AKR1C1Q04828 323 aa12.84□□□□□ -0.35
SCFD2-201ENST00000388940 FAM74A3Q4VXF1 159 aa12.84□□□□□ -0.35
SCFD2-201ENST00000388940 BTNL8Q6UX41 500 aa12.84□□□□□ -0.35
SCFD2-201ENST00000388940 LINC00696Q6ZRV3 163 aa12.84□□□□□ -0.35
SCFD2-201ENST00000388940 OR5L1Q8NGL2 311 aa12.84□□□□□ -0.35
SCFD2-201ENST00000388940 GTF3AQ92664 365 aaKnown RBP12.84□□□□□ -0.35
SCFD2-201ENST00000388940 RHOFQ9HBH0 211 aa12.84□□□□□ -0.35
SCFD2-201ENST00000388940 UQCC1Q9NVA1 299 aa12.84□□□□□ -0.35
SCFD2-201ENST00000388940 COA4Q9NYJ1 87 aa12.84□□□□□ -0.35
SCFD2-201ENST00000388940 CRIM1Q9NZV1 1036 aa12.84□□□□□ -0.35
SCFD2-201ENST00000388940 ZNF732B4DXR9 585 aa12.83□□□□□ -0.36
SCFD2-201ENST00000388940 KLRC4-KLRK1H3BQV0 150 aa12.83□□□□□ -0.36
SCFD2-201ENST00000388940 MPPED1O15442 326 aa12.83□□□□□ -0.36
SCFD2-201ENST00000388940 MED6O75586 246 aa12.83□□□□□ -0.36
SCFD2-201ENST00000388940 SCGB1D2O95969 90 aa12.83□□□□□ -0.36
SCFD2-201ENST00000388940 GLAP06280 429 aa12.83□□□□□ -0.36
SCFD2-201ENST00000388940 CCL2P13500 99 aa12.83□□□□□ -0.36
SCFD2-201ENST00000388940 LPAR6P43657 344 aa12.83□□□□□ -0.36
SCFD2-201ENST00000388940 MEOX1P50221 254 aa12.83□□□□□ -0.36
SCFD2-201ENST00000388940 PLP2Q04941 152 aa12.83□□□□□ -0.36
SCFD2-201ENST00000388940 LINC00596Q86U02 117 aa12.83□□□□□ -0.36
SCFD2-201ENST00000388940 PUSL1Q8N0Z8 303 aaKnown RBP12.83□□□□□ -0.36
SCFD2-201ENST00000388940 OR11L1Q8NGX0 322 aa12.83□□□□□ -0.36
SCFD2-201ENST00000388940 FER1L6-AS2Q96M78 137 aa12.83□□□□□ -0.36
SCFD2-201ENST00000388940 MTCH1Q9NZJ7 389 aa12.83□□□□□ -0.36
SCFD2-201ENST00000388940 PLA2G2EQ9NZK7 142 aa12.83□□□□□ -0.36
SCFD2-201ENST00000388940 PURGQ9UJV8 347 aaKnown RBP12.83□□□□□ -0.36
SCFD2-201ENST00000388940 POMT1Q9Y6A1 747 aa12.83□□□□□ -0.36
SCFD2-201ENST00000388940 C3orf85A0A1B0GTC6 90 aa12.82□□□□□ -0.36
SCFD2-201ENST00000388940 TRAPPC2LH3BP13 241 aa12.82□□□□□ -0.36
SCFD2-201ENST00000388940 M0R296 226 aa12.82□□□□□ -0.36
SCFD2-201ENST00000388940 GPR31O00270 319 aa12.82□□□□□ -0.36
SCFD2-201ENST00000388940 PHF1O43189 567 aaPredicted RBP12.82□□□□□ -0.36
SCFD2-201ENST00000388940 DIRAS3O95661 229 aa12.82□□□□□ -0.36
SCFD2-201ENST00000388940 SSTP61278 116 aa12.82□□□□□ -0.36
SCFD2-201ENST00000388940 NUFIP2Q7Z417 695 aaKnown RBP12.82□□□□□ -0.36
SCFD2-201ENST00000388940 MCEMP1Q8IX19 187 aa12.82□□□□□ -0.36
SCFD2-201ENST00000388940 OR4D5Q8NGN0 318 aa12.82□□□□□ -0.36
SCFD2-201ENST00000388940 LYPD6BQ8NI32 183 aa12.82□□□□□ -0.36
SCFD2-201ENST00000388940 HRH4Q9H3N8 390 aa12.82□□□□□ -0.36
SCFD2-201ENST00000388940 PLK3Q9H4B4 646 aa12.82□□□□□ -0.36
SCFD2-201ENST00000388940 TREM1Q9NP99 234 aa12.82□□□□□ -0.36
SCFD2-201ENST00000388940 ST8SIA3O43173 380 aa12.82□□□□□ -0.36
SCFD2-201ENST00000388940 CDS2O95674 445 aa12.82□□□□□ -0.36
SCFD2-201ENST00000388940 H2AFB1P0C5Y9 115 aa12.82□□□□□ -0.36
SCFD2-201ENST00000388940 GNRHRP30968 328 aa12.82□□□□□ -0.36
SCFD2-201ENST00000388940 MEOX2P50222 304 aa12.82□□□□□ -0.36
SCFD2-201ENST00000388940 GUCA2BQ16661 112 aa12.82□□□□□ -0.36
SCFD2-201ENST00000388940 FBXW12Q6X9E4 464 aa12.82□□□□□ -0.36
SCFD2-201ENST00000388940 ZFP62Q8NB50 900 aaPredicted RBP12.82□□□□□ -0.36
SCFD2-201ENST00000388940 OR5P3Q8WZ94 311 aa12.82□□□□□ -0.36
SCFD2-201ENST00000388940 ERGIC1Q969X5 290 aa12.82□□□□□ -0.36
SCFD2-201ENST00000388940 HIST1H2AAQ96QV6 131 aa12.82□□□□□ -0.36
SCFD2-201ENST00000388940 TP53RKQ96S44 253 aa12.82□□□□□ -0.36
SCFD2-201ENST00000388940 TMEM222Q9H0R3 208 aa12.82□□□□□ -0.36
SCFD2-201ENST00000388940 RIMS4Q9H426 269 aaPredicted RBP12.82□□□□□ -0.36
SCFD2-201ENST00000388940 MPC1Q9Y5U8 109 aa12.82□□□□□ -0.36
SCFD2-201ENST00000388940 CD300LBA8K4G0 201 aa12.81□□□□□ -0.36
SCFD2-201ENST00000388940 NGFP01138 241 aa12.81□□□□□ -0.36
SCFD2-201ENST00000388940 TK1P04183 234 aa12.81□□□□□ -0.36
SCFD2-201ENST00000388940 CTXN2P0C2S0 81 aa12.81□□□□□ -0.36
SCFD2-201ENST00000388940 SEC11BP0C7V7 166 aa12.81□□□□□ -0.36
SCFD2-201ENST00000388940 F2RL1P55085 397 aa12.81□□□□□ -0.36
SCFD2-201ENST00000388940 SLC10A1Q14973 349 aa12.81□□□□□ -0.36
SCFD2-201ENST00000388940 OR52M1Q8NGK5 317 aa12.81□□□□□ -0.36
SCFD2-201ENST00000388940 TMEM56Q96MV1 263 aa12.81□□□□□ -0.36
SCFD2-201ENST00000388940 TLNRD1Q9H1K6 362 aa12.81□□□□□ -0.36
SCFD2-201ENST00000388940 SPACA1Q9HBV2 294 aa12.81□□□□□ -0.36
SCFD2-201ENST00000388940 IL17BQ9UHF5 180 aa12.81□□□□□ -0.36
SCFD2-201ENST00000388940 TMEM56-RWDD3S4R434 201 aa12.81□□□□□ -0.36
SCFD2-201ENST00000388940 MED13Q9UHV7 2174 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms