RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 PCOLCEQ15113 449 aa16.53■□□□□ 0.24
CSPG5-202ENST00000383738 ABHD5Q8WTS1 349 aa16.53■□□□□ 0.24
CSPG5-202ENST00000383738 EMG1Q92979 244 aaKnown RBP16.53■□□□□ 0.24
CSPG5-202ENST00000383738 HIST1H2BAQ96A08 127 aa16.53■□□□□ 0.24
CSPG5-202ENST00000383738 TCAPO15273 167 aa16.53■□□□□ 0.24
CSPG5-202ENST00000383738 UPK3AO75631 287 aa16.53■□□□□ 0.24
CSPG5-202ENST00000383738 CRYAAP02489 173 aa16.53■□□□□ 0.24
CSPG5-202ENST00000383738 ZNF66Q6ZN08 573 aa16.53■□□□□ 0.24
CSPG5-202ENST00000383738 SLC36A1Q7Z2H8 476 aa16.53■□□□□ 0.24
CSPG5-202ENST00000383738 OR56B2PQ8NGI1 322 aa16.53■□□□□ 0.24
CSPG5-202ENST00000383738 SFT2D2O95562 160 aa16.53■□□□□ 0.24
CSPG5-202ENST00000383738 TLE4Q04727 773 aa16.53■□□□□ 0.24
CSPG5-202ENST00000383738 TMEM41BQ5BJD5 291 aa16.53■□□□□ 0.24
CSPG5-202ENST00000383738 RNF128Q8TEB7 428 aa16.53■□□□□ 0.24
CSPG5-202ENST00000383738 MRPL24Q96A35 216 aaKnown RBP16.53■□□□□ 0.24
CSPG5-202ENST00000383738 LRFN5Q96NI6 719 aa16.53■□□□□ 0.24
CSPG5-202ENST00000383738 DMRTA2Q96SC8 542 aa16.53■□□□□ 0.24
CSPG5-202ENST00000383738 SLC25A31Q9H0C2 315 aa16.53■□□□□ 0.24
CSPG5-202ENST00000383738 OR51M1Q9H341 326 aa16.53■□□□□ 0.24
CSPG5-202ENST00000383738 OPA3Q9H6K4 179 aa16.53■□□□□ 0.24
CSPG5-202ENST00000383738 MSL2Q9HCI7 577 aa16.53■□□□□ 0.24
CSPG5-202ENST00000383738 TREM2Q9NZC2 230 aa16.53■□□□□ 0.24
CSPG5-202ENST00000383738 COX6A1P12074 109 aa16.52■□□□□ 0.24
CSPG5-202ENST00000383738 MMP9P14780 707 aa16.52■□□□□ 0.24
CSPG5-202ENST00000383738 ZNF343Q6P1L6 599 aa16.52■□□□□ 0.24
CSPG5-202ENST00000383738 ZNF485Q8NCK3 441 aa16.52■□□□□ 0.24
CSPG5-202ENST00000383738 H7BYZ3 331 aa16.52■□□□□ 0.24
CSPG5-202ENST00000383738 CELA3AP09093 270 aa16.52■□□□□ 0.24
CSPG5-202ENST00000383738 IAPPP10997 89 aa16.52■□□□□ 0.24
CSPG5-202ENST00000383738 A0A1W2PQD3 144 aa16.52■□□□□ 0.23
CSPG5-202ENST00000383738 C21orf140B9A014 251 aa16.52■□□□□ 0.23
CSPG5-202ENST00000383738 E5RGE8 158 aa16.52■□□□□ 0.23
CSPG5-202ENST00000383738 GFRA3O60609 400 aa16.52■□□□□ 0.23
CSPG5-202ENST00000383738 BPNT1O95861 308 aa16.52■□□□□ 0.23
CSPG5-202ENST00000383738 TK1P04183 234 aa16.52■□□□□ 0.23
CSPG5-202ENST00000383738 TMEM251Q8N6I4 163 aa16.52■□□□□ 0.23
CSPG5-202ENST00000383738 ZDHHC22Q8N966 263 aa16.52■□□□□ 0.23
CSPG5-202ENST00000383738 OR1F12Q8NHA8 337 aa16.52■□□□□ 0.23
CSPG5-202ENST00000383738 TVP23CQ96ET8 276 aa16.52■□□□□ 0.23
CSPG5-202ENST00000383738 OR10C1Q96KK4 312 aa16.52■□□□□ 0.23
CSPG5-202ENST00000383738 NSG2Q9Y328 171 aa16.52■□□□□ 0.23
CSPG5-202ENST00000383738 SIRPB1O00241 398 aa16.52■□□□□ 0.23
CSPG5-202ENST00000383738 GPM6AP51674 278 aa16.52■□□□□ 0.23
CSPG5-202ENST00000383738 SLC25A1P53007 311 aa16.52■□□□□ 0.23
CSPG5-202ENST00000383738 OR8B8Q15620 311 aa16.52■□□□□ 0.23
CSPG5-202ENST00000383738 PPP1R32Q7Z5V6 425 aa16.52■□□□□ 0.23
CSPG5-202ENST00000383738 GNG12Q9UBI6 72 aa16.52■□□□□ 0.23
CSPG5-202ENST00000383738 IL10RAQ13651 578 aa16.51■□□□□ 0.23
CSPG5-202ENST00000383738 HIKESHIQ53FT3 197 aa16.51■□□□□ 0.23
CSPG5-202ENST00000383738 ZNF286AQ9HBT8 521 aa16.51■□□□□ 0.23
CSPG5-202ENST00000383738 RCC2Q9P258 522 aaKnown RBP16.51■□□□□ 0.23
CSPG5-202ENST00000383738 AGFG2O95081 481 aa16.51■□□□□ 0.23
CSPG5-202ENST00000383738 TRGC2P03986 189 aa16.51■□□□□ 0.23
CSPG5-202ENST00000383738 HEXAP06865 529 aa16.51■□□□□ 0.23
CSPG5-202ENST00000383738 NHLH2Q02577 135 aa16.51■□□□□ 0.23
CSPG5-202ENST00000383738 TICRRQ7Z2Z1 1910 aa16.51■□□□□ 0.23
CSPG5-202ENST00000383738 WFIKKN1Q96NZ8 548 aa16.51■□□□□ 0.23
CSPG5-202ENST00000383738 FAAP24Q9BTP7 215 aa16.51■□□□□ 0.23
CSPG5-202ENST00000383738 GCM1Q9NP62 436 aa16.51■□□□□ 0.23
CSPG5-202ENST00000383738 RNF222A6NCQ9 220 aa16.51■□□□□ 0.23
CSPG5-202ENST00000383738 FAM90A27PA6NNH2 459 aa16.51■□□□□ 0.23
CSPG5-202ENST00000383738 SP1P08047 785 aa16.51■□□□□ 0.23
CSPG5-202ENST00000383738 ZNF880Q6PDB4 577 aa16.51■□□□□ 0.23
CSPG5-202ENST00000383738 HDHD3Q9BSH5 251 aaPredicted RBP16.51■□□□□ 0.23
CSPG5-202ENST00000383738 TTTY12Q9BZ98 90 aa16.51■□□□□ 0.23
CSPG5-202ENST00000383738 IGKV1D-42A0A075B6H8 117 aa16.5■□□□□ 0.23
CSPG5-202ENST00000383738 OR6C6A6NF89 314 aa16.5■□□□□ 0.23
CSPG5-202ENST00000383738 ASB10Q8WXI3 467 aa16.5■□□□□ 0.23
CSPG5-202ENST00000383738 H1FXQ92522 213 aaKnown RBP16.5■□□□□ 0.23
CSPG5-202ENST00000383738 FAM210BQ96KR6 192 aa16.5■□□□□ 0.23
CSPG5-202ENST00000383738 GPHA2Q96T91 129 aa16.5■□□□□ 0.23
CSPG5-202ENST00000383738 A0A0G2JMM0 328 aa16.5■□□□□ 0.23
CSPG5-202ENST00000383738 A0A1W2PPB8 328 aa16.5■□□□□ 0.23
CSPG5-202ENST00000383738 A0A1W2PRS3 328 aa16.5■□□□□ 0.23
CSPG5-202ENST00000383738 KIR3DP1A8MWS1 328 aa16.5■□□□□ 0.23
CSPG5-202ENST00000383738 CLN5O75503 358 aa16.5■□□□□ 0.23
CSPG5-202ENST00000383738 OR5AC1P0C628 307 aa16.5■□□□□ 0.23
CSPG5-202ENST00000383738 H3F3AP84243 136 aa16.5■□□□□ 0.23
CSPG5-202ENST00000383738 EGR4Q05215 589 aa16.5■□□□□ 0.23
CSPG5-202ENST00000383738 SURF2Q15527 256 aaPredicted RBP16.5■□□□□ 0.23
CSPG5-202ENST00000383738 Q3ZCU0 254 aa16.5■□□□□ 0.23
CSPG5-202ENST00000383738 NPTNQ9Y639 398 aa16.5■□□□□ 0.23
CSPG5-202ENST00000383738 ATP23Q9Y6H3 246 aa16.5■□□□□ 0.23
CSPG5-202ENST00000383738 PRR32B1ATL7 298 aa16.5■□□□□ 0.23
CSPG5-202ENST00000383738 FBP1P09467 338 aa16.5■□□□□ 0.23
CSPG5-202ENST00000383738 VSIG8P0DPA2 414 aa16.5■□□□□ 0.23
CSPG5-202ENST00000383738 OR8G1Q15617 311 aa16.5■□□□□ 0.23
CSPG5-202ENST00000383738 SMIM7Q9BQ49 75 aa16.5■□□□□ 0.23
CSPG5-202ENST00000383738 AURKAIP1Q9NWT8 199 aaPredicted RBP16.5■□□□□ 0.23
CSPG5-202ENST00000383738 KIAA2026Q5HYC2 2103 aa16.5■□□□□ 0.23
CSPG5-202ENST00000383738 HEATR5AQ86XA9 2040 aa16.5■□□□□ 0.23
CSPG5-202ENST00000383738 HIST1H1DP16402 221 aaKnown RBP16.49■□□□□ 0.23
CSPG5-202ENST00000383738 CA6P23280 308 aa16.49■□□□□ 0.23
CSPG5-202ENST00000383738 ARL6IP1Q15041 203 aa16.49■□□□□ 0.23
CSPG5-202ENST00000383738 SIGLEC12Q96PQ1 595 aa16.49■□□□□ 0.23
CSPG5-202ENST00000383738 GGACTQ9BVM4 153 aa16.49■□□□□ 0.23
CSPG5-202ENST00000383738 FBXL14Q8N1E6 418 aa16.49■□□□□ 0.23
CSPG5-202ENST00000383738 ZNF732B4DXR9 585 aa16.49■□□□□ 0.23
CSPG5-202ENST00000383738 ERVS71-1P61550 626 aa16.49■□□□□ 0.23
CSPG5-202ENST00000383738 SPANXN5Q5MJ07 72 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms