RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 GNMTQ14749 295 aa7.75□□□□□ -1.17
GPNMB-202ENST00000381990 ABCA11PQ4W5N1 156 aa7.75□□□□□ -1.17
GPNMB-202ENST00000381990 HIST2H3PS2Q5TEC6 136 aa7.75□□□□□ -1.17
GPNMB-202ENST00000381990 FAM213BQ8TBF2 198 aa7.75□□□□□ -1.17
GPNMB-202ENST00000381990 GTF3AQ92664 365 aaKnown RBP7.75□□□□□ -1.17
GPNMB-202ENST00000381990 SYT3Q9BQG1 590 aa7.75□□□□□ -1.17
GPNMB-202ENST00000381990 PLEKHJ1Q9NW61 149 aa7.75□□□□□ -1.17
GPNMB-202ENST00000381990 IL17BQ9UHF5 180 aa7.75□□□□□ -1.17
GPNMB-202ENST00000381990 BOKQ9UMX3 212 aaPredicted RBP7.75□□□□□ -1.17
GPNMB-202ENST00000381990 B4DEV8 164 aa7.74□□□□□ -1.17
GPNMB-202ENST00000381990 NPIPA2E9PIF3 369 aa7.74□□□□□ -1.17
GPNMB-202ENST00000381990 NPIPA3F8WFD2 350 aa7.74□□□□□ -1.17
GPNMB-202ENST00000381990 H3BQ15 152 aa7.74□□□□□ -1.17
GPNMB-202ENST00000381990 IGLV3-1P01715 115 aa7.74□□□□□ -1.17
GPNMB-202ENST00000381990 HSPB1P04792 205 aaKnown RBP7.74□□□□□ -1.17
GPNMB-202ENST00000381990 SERPINA2P20848 420 aa7.74□□□□□ -1.17
GPNMB-202ENST00000381990 NDUFA6P56556 154 aa7.74□□□□□ -1.17
GPNMB-202ENST00000381990 RAC3P60763 192 aa7.74□□□□□ -1.17
GPNMB-202ENST00000381990 FOXO1Q12778 655 aa7.74□□□□□ -1.17
GPNMB-202ENST00000381990 MFAP5Q13361 173 aa7.74□□□□□ -1.17
GPNMB-202ENST00000381990 ELOBQ15370 118 aa7.74□□□□□ -1.17
GPNMB-202ENST00000381990 Q3ZCU0 254 aa7.74□□□□□ -1.17
GPNMB-202ENST00000381990 FBXW12Q6X9E4 464 aa7.74□□□□□ -1.17
GPNMB-202ENST00000381990 LIAT1Q6ZQX7 453 aa7.74□□□□□ -1.17
GPNMB-202ENST00000381990 SLC35E3Q7Z769 313 aa7.74□□□□□ -1.17
GPNMB-202ENST00000381990 LGI3Q8N145 548 aa7.74□□□□□ -1.17
GPNMB-202ENST00000381990 ZNF383Q8NA42 475 aa7.74□□□□□ -1.17
GPNMB-202ENST00000381990 RTN4IP1Q8WWV3 396 aaPredicted RBP7.74□□□□□ -1.17
GPNMB-202ENST00000381990 HAS2Q92819 552 aa7.74□□□□□ -1.17
GPNMB-202ENST00000381990 C18orf12Q96KH6 178 aa7.74□□□□□ -1.17
GPNMB-202ENST00000381990 UCN2Q96RP3 112 aa7.74□□□□□ -1.17
GPNMB-202ENST00000381990 SH3BGRL3Q9H299 93 aa7.74□□□□□ -1.17
GPNMB-202ENST00000381990 NELFAQ9H3P2 528 aa7.74□□□□□ -1.17
GPNMB-202ENST00000381990 PRDM13Q9H4Q3 707 aa7.74□□□□□ -1.17
GPNMB-202ENST00000381990 PNRC2Q9NPJ4 139 aaKnown RBP7.74□□□□□ -1.17
GPNMB-202ENST00000381990 HSF4Q9ULV5 492 aa7.74□□□□□ -1.17
GPNMB-202ENST00000381990 NCKAP5O14513 1909 aa7.74□□□□□ -1.17
GPNMB-202ENST00000381990 A0A0U1RQV5 110 aa7.74□□□□□ -1.17
GPNMB-202ENST00000381990 FAM230AA0A1W2PPH8 454 aa7.74□□□□□ -1.17
GPNMB-202ENST00000381990 ZNF728P0DKX0 622 aa7.74□□□□□ -1.17
GPNMB-202ENST00000381990 TAGLN2P37802 199 aaKnown RBP7.74□□□□□ -1.17
GPNMB-202ENST00000381990 CSNK1A1P48729 337 aa7.74□□□□□ -1.17
GPNMB-202ENST00000381990 UBE2KP61086 200 aa7.74□□□□□ -1.17
GPNMB-202ENST00000381990 UBE2V2Q15819 145 aa7.74□□□□□ -1.17
GPNMB-202ENST00000381990 PLXDC2Q6UX71 529 aa7.74□□□□□ -1.17
GPNMB-202ENST00000381990 IL22RA1Q8N6P7 574 aa7.74□□□□□ -1.17
GPNMB-202ENST00000381990 ZNF283Q8N7M2 679 aa7.74□□□□□ -1.17
GPNMB-202ENST00000381990 HSD17B11Q8NBQ5 300 aa7.74□□□□□ -1.17
GPNMB-202ENST00000381990 DEFB124Q8NES8 71 aa7.74□□□□□ -1.17
GPNMB-202ENST00000381990 RAB39BQ96DA2 213 aa7.74□□□□□ -1.17
GPNMB-202ENST00000381990 FAM173AQ9BQD7 235 aa7.74□□□□□ -1.17
GPNMB-202ENST00000381990 NIPSNAP3BQ9BS92 247 aa7.74□□□□□ -1.17
GPNMB-202ENST00000381990 SF3B5Q9BWJ5 86 aaKnown RBP7.74□□□□□ -1.17
GPNMB-202ENST00000381990 ZNF319Q9P2F9 582 aa7.74□□□□□ -1.17
GPNMB-202ENST00000381990 MCTS1Q9ULC4 181 aaKnown RBP7.74□□□□□ -1.17
GPNMB-202ENST00000381990 IGHV3-15A0A0B4J1V0 119 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 PINLYPA6NC86 204 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 TSTD3H0UI37 97 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 HSPA12AO43301 675 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 TRAPPC6AO75865 159 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 DHRS3O75911 302 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 C1QL1O75973 258 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 NEURL1O76050 574 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 OR5AC1P0C628 307 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 GDF1P27539 372 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 CD82P27701 267 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 CDAP32320 146 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 PPP1CCP36873 323 aaKnown RBP7.73□□□□□ -1.17
GPNMB-202ENST00000381990 PKIAP61925 76 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 NKX6-1P78426 367 aaPredicted RBP7.73□□□□□ -1.17
GPNMB-202ENST00000381990 SRPXP78539 464 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 ZNF674Q2M3X9 581 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 SPINK14Q6IE38 97 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 TMEM182Q6ZP80 229 aaPredicted RBP7.73□□□□□ -1.17
GPNMB-202ENST00000381990 FAM57BQ71RH2 274 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 SSX9Q7RTT3 188 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 GGNQ86UU5 652 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 TMEM54Q969K7 222 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 RBMXL1Q96E39 390 aaKnown RBP7.73□□□□□ -1.17
GPNMB-202ENST00000381990 BOD1Q96IK1 185 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 FER1L6-AS2Q96M78 137 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 ZNF385AQ96PM9 386 aaKnown RBP7.73□□□□□ -1.17
GPNMB-202ENST00000381990 SOX7Q9BT81 388 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 SRXN1Q9BYN0 137 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 PHF3Q92576 2039 aaKnown RBP7.73□□□□□ -1.17
GPNMB-202ENST00000381990 IGKV1D-8A0A087WSZ0 117 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 PRR33A8MZF0 331 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 HIST1H2BKO60814 126 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 PITX3O75364 302 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 CDS2O95674 445 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 HIST1H2BJP06899 126 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 FTH1P19P0C7X4 201 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 HIST1H2BOP23527 126 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 HIST1H2BBP33778 126 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 CARD18P57730 90 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 HIST1H2BDP58876 126 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 HIST1H2BCP62807 126 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 HIST2H2BEQ16778 126 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 WIPI1Q5MNZ9 446 aaPredicted RBP7.73□□□□□ -1.17
GPNMB-202ENST00000381990 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms