RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 ZNF154Q13106 437 aa12.06□□□□□ -0.48
SDC1-202ENST00000381150 TESK1Q15569 626 aa12.06□□□□□ -0.48
SDC1-202ENST00000381150 ZNF66Q6ZN08 573 aa12.06□□□□□ -0.48
SDC1-202ENST00000381150 GRINAQ7Z429 371 aa12.06□□□□□ -0.48
SDC1-202ENST00000381150 C1QL4Q86Z23 238 aa12.06□□□□□ -0.48
SDC1-202ENST00000381150 SLC35G3Q8N808 338 aa12.06□□□□□ -0.48
SDC1-202ENST00000381150 NFAM1Q8NET5 270 aaPredicted RBP12.06□□□□□ -0.48
SDC1-202ENST00000381150 LIME1Q9H400 295 aa12.06□□□□□ -0.48
SDC1-202ENST00000381150 A0A1W2PPQ1 181 aa12.05□□□□□ -0.48
SDC1-202ENST00000381150 XKRY2A2RUG3 117 aa12.05□□□□□ -0.48
SDC1-202ENST00000381150 CEBPZOSA8MTT3 80 aa12.05□□□□□ -0.48
SDC1-202ENST00000381150 ZNHIT1O43257 154 aa12.05□□□□□ -0.48
SDC1-202ENST00000381150 RNF4P78317 190 aa12.05□□□□□ -0.48
SDC1-202ENST00000381150 PMS2P11Q13670 270 aa12.05□□□□□ -0.48
SDC1-202ENST00000381150 CXorf66Q5JRM2 361 aaPredicted RBP12.05□□□□□ -0.48
SDC1-202ENST00000381150 ZNF695Q8IW36 515 aa12.05□□□□□ -0.48
SDC1-202ENST00000381150 ASB10Q8WXI3 467 aa12.05□□□□□ -0.48
SDC1-202ENST00000381150 SHDQ96IW2 340 aa12.05□□□□□ -0.48
SDC1-202ENST00000381150 GINS3Q9BRX5 216 aa12.05□□□□□ -0.48
SDC1-202ENST00000381150 DDA1Q9BW61 102 aa12.05□□□□□ -0.48
SDC1-202ENST00000381150 NAA60Q9H7X0 242 aa12.05□□□□□ -0.48
SDC1-202ENST00000381150 SLC2A9Q9NRM0 540 aa12.05□□□□□ -0.48
SDC1-202ENST00000381150 ANXA10Q9UJ72 324 aa12.05□□□□□ -0.48
SDC1-202ENST00000381150 PIGLQ9Y2B2 252 aa12.05□□□□□ -0.48
SDC1-202ENST00000381150 ZNF705FA8MVS1 300 aaPredicted RBP12.05□□□□□ -0.48
SDC1-202ENST00000381150 ZNF705DP0CH99 300 aaPredicted RBP12.05□□□□□ -0.48
SDC1-202ENST00000381150 ZNF705BP0CI00 300 aaPredicted RBP12.05□□□□□ -0.48
SDC1-202ENST00000381150 DYNLT3P51808 116 aa12.05□□□□□ -0.48
SDC1-202ENST00000381150 RPS18P62269 152 aaKnown RBP12.05□□□□□ -0.48
SDC1-202ENST00000381150 ZNF266Q14584 549 aa12.05□□□□□ -0.48
SDC1-202ENST00000381150 HIKESHIQ53FT3 197 aa12.05□□□□□ -0.48
SDC1-202ENST00000381150 RHBDD2Q6NTF9 364 aa12.05□□□□□ -0.48
SDC1-202ENST00000381150 LYPD6Q86Y78 171 aa12.05□□□□□ -0.48
SDC1-202ENST00000381150 CRYM-AS1A6NIL9 109 aa12.05□□□□□ -0.48
SDC1-202ENST00000381150 RPUSD4Q96CM3 377 aaKnown RBP12.05□□□□□ -0.48
SDC1-202ENST00000381150 SIRT7Q9NRC8 400 aa12.05□□□□□ -0.48
SDC1-202ENST00000381150 A6NNC1 897 aa12.04□□□□□ -0.48
SDC1-202ENST00000381150 CD55P08174 381 aa12.04□□□□□ -0.48
SDC1-202ENST00000381150 FAM185AQ8N0U4 392 aa12.04□□□□□ -0.48
SDC1-202ENST00000381150 OR2AE1Q8NHA4 323 aa12.04□□□□□ -0.48
SDC1-202ENST00000381150 LYPD6BQ8NI32 183 aa12.04□□□□□ -0.48
SDC1-202ENST00000381150 NAT6Q93015 286 aa12.04□□□□□ -0.48
SDC1-202ENST00000381150 ZNF442Q9H7R0 627 aa12.04□□□□□ -0.48
SDC1-202ENST00000381150 ZNF665Q9H7R5 613 aa12.04□□□□□ -0.48
SDC1-202ENST00000381150 KLRF1Q9NZS2 232 aa12.04□□□□□ -0.48
SDC1-202ENST00000381150 CACNA1EQ15878 2313 aa12.04□□□□□ -0.48
SDC1-202ENST00000381150 CLDN34H7C241 214 aa12.04□□□□□ -0.48
SDC1-202ENST00000381150 K7N7A8 449 aa12.04□□□□□ -0.48
SDC1-202ENST00000381150 OR2J2O76002 312 aa12.04□□□□□ -0.48
SDC1-202ENST00000381150 TIAF1O95411 115 aa12.04□□□□□ -0.48
SDC1-202ENST00000381150 IGHMP01871 453 aa12.04□□□□□ -0.48
SDC1-202ENST00000381150 CTSDP07339 412 aaPredicted RBP12.04□□□□□ -0.48
SDC1-202ENST00000381150 GLIPR1P48060 266 aa12.04□□□□□ -0.48
SDC1-202ENST00000381150 CSNK1A1P48729 337 aa12.04□□□□□ -0.48
SDC1-202ENST00000381150 CLN3Q13286 438 aa12.04□□□□□ -0.48
SDC1-202ENST00000381150 UEVLDQ8IX04 471 aa12.04□□□□□ -0.48
SDC1-202ENST00000381150 NEK7Q8TDX7 302 aa12.04□□□□□ -0.48
SDC1-202ENST00000381150 C1orf147Q96MC9 270 aaPredicted RBP12.04□□□□□ -0.48
SDC1-202ENST00000381150 LHFPL6Q9Y693 200 aa12.04□□□□□ -0.48
SDC1-202ENST00000381150 WDFY4Q6ZS81 3184 aa12.04□□□□□ -0.48
SDC1-202ENST00000381150 LY6G6EA0A0G2JKS1 128 aa12.03□□□□□ -0.48
SDC1-202ENST00000381150 IGSF23A1L1A6 192 aa12.03□□□□□ -0.48
SDC1-202ENST00000381150 E9PLN8 166 aa12.03□□□□□ -0.48
SDC1-202ENST00000381150 ELLP55199 621 aaPredicted RBP12.03□□□□□ -0.48
SDC1-202ENST00000381150 PLA2G3Q9NZ20 509 aa12.03□□□□□ -0.48
SDC1-202ENST00000381150 KLHL13Q9P2N7 655 aa12.03□□□□□ -0.48
SDC1-202ENST00000381150 U3KQA8 63 aa12.03□□□□□ -0.48
SDC1-202ENST00000381150 KNTC1P50748 2209 aa12.03□□□□□ -0.48
SDC1-202ENST00000381150 ELOA3CA0A087WX78 387 aaPredicted RBP12.03□□□□□ -0.48
SDC1-202ENST00000381150 ICAM4Q14773 271 aa12.03□□□□□ -0.48
SDC1-202ENST00000381150 IZUMO4Q1ZYL8 232 aa12.03□□□□□ -0.48
SDC1-202ENST00000381150 CST9LP1Q5W188 147 aa12.03□□□□□ -0.48
SDC1-202ENST00000381150 M1APQ8TC57 530 aa12.03□□□□□ -0.48
SDC1-202ENST00000381150 TUBD1Q9UJT1 453 aa12.03□□□□□ -0.48
SDC1-202ENST00000381150 MSTNO14793 375 aa12.03□□□□□ -0.48
SDC1-202ENST00000381150 TOX3O15405 576 aaPredicted RBP12.03□□□□□ -0.48
SDC1-202ENST00000381150 GZMBP10144 247 aa12.03□□□□□ -0.48
SDC1-202ENST00000381150 FOXF1Q12946 379 aa12.03□□□□□ -0.48
SDC1-202ENST00000381150 NCR3LG1Q68D85 454 aa12.03□□□□□ -0.48
SDC1-202ENST00000381150 ANKRD37Q7Z713 158 aa12.03□□□□□ -0.48
SDC1-202ENST00000381150 RNF138Q8WVD3 245 aa12.03□□□□□ -0.48
SDC1-202ENST00000381150 TMEM171Q8WVE6 324 aa12.03□□□□□ -0.48
SDC1-202ENST00000381150 TMEM68Q96MH6 324 aa12.03□□□□□ -0.48
SDC1-202ENST00000381150 SYT3Q9BQG1 590 aa12.03□□□□□ -0.48
SDC1-202ENST00000381150 SERINC1Q9NRX5 453 aa12.03□□□□□ -0.48
SDC1-202ENST00000381150 NECAP2Q9NVZ3 263 aa12.03□□□□□ -0.48
SDC1-202ENST00000381150 AURKAIP1Q9NWT8 199 aaPredicted RBP12.03□□□□□ -0.48
SDC1-202ENST00000381150 KIAA2026Q5HYC2 2103 aa12.03□□□□□ -0.48
SDC1-202ENST00000381150 VSTM2BA6NLU5 285 aa12.02□□□□□ -0.48
SDC1-202ENST00000381150 C9J4A7 227 aa12.02□□□□□ -0.48
SDC1-202ENST00000381150 PNLIPP16233 465 aa12.02□□□□□ -0.48
SDC1-202ENST00000381150 CD33P20138 364 aa12.02□□□□□ -0.48
SDC1-202ENST00000381150 BMP5P22003 454 aa12.02□□□□□ -0.48
SDC1-202ENST00000381150 PLA2G5P39877 138 aa12.02□□□□□ -0.48
SDC1-202ENST00000381150 TMEM267Q0VDI3 215 aaPredicted RBP12.02□□□□□ -0.48
SDC1-202ENST00000381150 SLC10A1Q14973 349 aa12.02□□□□□ -0.48
SDC1-202ENST00000381150 P2RY6Q15077 328 aa12.02□□□□□ -0.48
SDC1-202ENST00000381150 KCNK17Q96T54 332 aa12.02□□□□□ -0.48
SDC1-202ENST00000381150 RSG1Q9BU20 258 aa12.02□□□□□ -0.48
SDC1-202ENST00000381150 RBM24Q9BX46 236 aaKnown RBP12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms