RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 PRELID1Q9Y255 219 aa10.66□□□□□ -0.7
GABPB1-203ENST00000380877 MPC2O95563 127 aa10.65□□□□□ -0.7
GABPB1-203ENST00000380877 UCP2P55851 309 aa10.65□□□□□ -0.7
GABPB1-203ENST00000380877 RAB4BP61018 213 aa10.65□□□□□ -0.7
GABPB1-203ENST00000380877 FOXO1Q12778 655 aa10.65□□□□□ -0.7
GABPB1-203ENST00000380877 Q3ZCU0 254 aa10.65□□□□□ -0.7
GABPB1-203ENST00000380877 SLC25A53Q5H9E4 307 aa10.65□□□□□ -0.7
GABPB1-203ENST00000380877 MYLKQ15746 1914 aa10.65□□□□□ -0.7
GABPB1-203ENST00000380877 A8MXE2 369 aa10.65□□□□□ -0.7
GABPB1-203ENST00000380877 NPIPB7O75200 414 aa10.65□□□□□ -0.7
GABPB1-203ENST00000380877 TEX261Q6UWH6 196 aa10.65□□□□□ -0.7
GABPB1-203ENST00000380877 CLEC18BQ6UXF7 455 aa10.65□□□□□ -0.7
GABPB1-203ENST00000380877 OR1K1Q8NGR3 316 aa10.65□□□□□ -0.7
GABPB1-203ENST00000380877 SLC39A7Q92504 469 aa10.65□□□□□ -0.7
GABPB1-203ENST00000380877 DYRK2Q92630 601 aa10.65□□□□□ -0.7
GABPB1-203ENST00000380877 ZNF488Q96MN9 340 aa10.65□□□□□ -0.7
GABPB1-203ENST00000380877 HDHD3Q9BSH5 251 aaPredicted RBP10.65□□□□□ -0.7
GABPB1-203ENST00000380877 WNT5BQ9H1J7 359 aa10.65□□□□□ -0.7
GABPB1-203ENST00000380877 OR6C3Q9NZP0 311 aa10.65□□□□□ -0.7
GABPB1-203ENST00000380877 KCNK7Q9Y2U2 307 aa10.65□□□□□ -0.7
GABPB1-203ENST00000380877 U3KQ87 197 aa10.65□□□□□ -0.7
GABPB1-203ENST00000380877 DOCK9Q9BZ29 2069 aa10.65□□□□□ -0.7
GABPB1-203ENST00000380877 ZFP92A6NM28 416 aa10.65□□□□□ -0.7
GABPB1-203ENST00000380877 RBM11P57052 281 aaKnown RBP10.65□□□□□ -0.7
GABPB1-203ENST00000380877 CEACAM21Q3KPI0 293 aa10.65□□□□□ -0.7
GABPB1-203ENST00000380877 SCMH1Q96GD3 660 aa10.65□□□□□ -0.7
GABPB1-203ENST00000380877 OR2D2Q9H210 308 aa10.65□□□□□ -0.7
GABPB1-203ENST00000380877 hADV38S2A0JD32 116 aa10.65□□□□□ -0.71
GABPB1-203ENST00000380877 BTBD17A6NE02 478 aa10.65□□□□□ -0.71
GABPB1-203ENST00000380877 ADAM20O43506 726 aa10.65□□□□□ -0.71
GABPB1-203ENST00000380877 PPYP01298 95 aa10.65□□□□□ -0.71
GABPB1-203ENST00000380877 TOR2AQ5JU69 321 aa10.65□□□□□ -0.71
GABPB1-203ENST00000380877 C19orf48Q6RUI8 117 aa10.65□□□□□ -0.71
GABPB1-203ENST00000380877 THNSL2Q86YJ6 484 aa10.65□□□□□ -0.71
GABPB1-203ENST00000380877 TMEM54Q969K7 222 aa10.65□□□□□ -0.71
GABPB1-203ENST00000380877 SLC35E1Q96K37 410 aa10.65□□□□□ -0.71
GABPB1-203ENST00000380877 KLK13Q9UKR3 277 aa10.65□□□□□ -0.71
GABPB1-203ENST00000380877 PLXNA4Q9HCM2 1894 aa10.64□□□□□ -0.71
GABPB1-203ENST00000380877 GNG10P50151 68 aa10.64□□□□□ -0.71
GABPB1-203ENST00000380877 MOGAT2Q3SYC2 334 aa10.64□□□□□ -0.71
GABPB1-203ENST00000380877 HOGA1Q86XE5 327 aa10.64□□□□□ -0.71
GABPB1-203ENST00000380877 ZNF485Q8NCK3 441 aa10.64□□□□□ -0.71
GABPB1-203ENST00000380877 SAP30LQ9HAJ7 183 aa10.64□□□□□ -0.71
GABPB1-203ENST00000380877 RASL12Q9NYN1 266 aa10.64□□□□□ -0.71
GABPB1-203ENST00000380877 TRAV39A0A0B4J263 110 aa10.64□□□□□ -0.71
GABPB1-203ENST00000380877 GPR37O15354 613 aa10.64□□□□□ -0.71
GABPB1-203ENST00000380877 IGFBP7Q16270 282 aa10.64□□□□□ -0.71
GABPB1-203ENST00000380877 SLC25A42Q86VD7 318 aa10.64□□□□□ -0.71
GABPB1-203ENST00000380877 OR4D10Q8NGI6 311 aa10.64□□□□□ -0.71
GABPB1-203ENST00000380877 UHRF2Q96PU4 802 aa10.64□□□□□ -0.71
GABPB1-203ENST00000380877 SEMA5BQ9P283 1151 aa10.64□□□□□ -0.71
GABPB1-203ENST00000380877 PURGQ9UJV8 347 aaKnown RBP10.64□□□□□ -0.71
GABPB1-203ENST00000380877 ZFHX2Q9C0A1 2572 aaPredicted RBP10.64□□□□□ -0.71
GABPB1-203ENST00000380877 TMEM210A6NLX4 147 aa10.64□□□□□ -0.71
GABPB1-203ENST00000380877 CCL21O00585 134 aa10.64□□□□□ -0.71
GABPB1-203ENST00000380877 FCGR3BO75015 233 aa10.64□□□□□ -0.71
GABPB1-203ENST00000380877 CA11O75493 328 aa10.64□□□□□ -0.71
GABPB1-203ENST00000380877 IGHV3-13P01766 116 aa10.64□□□□□ -0.71
GABPB1-203ENST00000380877 IGHV3-7P01780 117 aa10.64□□□□□ -0.71
GABPB1-203ENST00000380877 FREM3P0C091 2139 aa10.64□□□□□ -0.71
GABPB1-203ENST00000380877 PRF1P14222 555 aa10.64□□□□□ -0.71
GABPB1-203ENST00000380877 LPAR6P43657 344 aa10.64□□□□□ -0.71
GABPB1-203ENST00000380877 HMGN3Q15651 99 aa10.64□□□□□ -0.71
GABPB1-203ENST00000380877 NARFLQ9H6Q4 476 aa10.64□□□□□ -0.71
GABPB1-203ENST00000380877 SERTAD4Q9NUC0 356 aa10.64□□□□□ -0.71
GABPB1-203ENST00000380877 TREM2Q9NZC2 230 aa10.64□□□□□ -0.71
GABPB1-203ENST00000380877 MST1P26927 711 aa10.64□□□□□ -0.71
GABPB1-203ENST00000380877 CD80P33681 288 aa10.64□□□□□ -0.71
GABPB1-203ENST00000380877 GNB1P62873 340 aa10.64□□□□□ -0.71
GABPB1-203ENST00000380877 PRR13Q9NZ81 148 aa10.64□□□□□ -0.71
GABPB1-203ENST00000380877 TRAV38-1A0A0B4J264 116 aa10.63□□□□□ -0.71
GABPB1-203ENST00000380877 ANKRD34BA5PLL1 514 aa10.63□□□□□ -0.71
GABPB1-203ENST00000380877 PPIHO43447 177 aaKnown RBP10.63□□□□□ -0.71
GABPB1-203ENST00000380877 TNFSF10P50591 281 aa10.63□□□□□ -0.71
GABPB1-203ENST00000380877 LCN15Q6UWW0 184 aa10.63□□□□□ -0.71
GABPB1-203ENST00000380877 PRR7Q8TB68 274 aa10.63□□□□□ -0.71
GABPB1-203ENST00000380877 ADGRG7Q96K78 797 aa10.63□□□□□ -0.71
GABPB1-203ENST00000380877 NIPSNAP3BQ9BS92 247 aa10.63□□□□□ -0.71
GABPB1-203ENST00000380877 RNF7Q9UBF6 113 aa10.63□□□□□ -0.71
GABPB1-203ENST00000380877 CACFD1Q9UGQ2 172 aa10.63□□□□□ -0.71
GABPB1-203ENST00000380877 DHRS7CA6NNS2 312 aa10.63□□□□□ -0.71
GABPB1-203ENST00000380877 ONECUT2O95948 504 aa10.63□□□□□ -0.71
GABPB1-203ENST00000380877 HOXB1P14653 301 aaPredicted RBP10.63□□□□□ -0.71
GABPB1-203ENST00000380877 ERHP84090 104 aaKnown RBP10.63□□□□□ -0.71
GABPB1-203ENST00000380877 GABRA6Q16445 453 aa10.63□□□□□ -0.71
GABPB1-203ENST00000380877 RGP1Q92546 391 aaPredicted RBP10.63□□□□□ -0.71
GABPB1-203ENST00000380877 KIAA1456Q9P272 454 aa10.63□□□□□ -0.71
GABPB1-203ENST00000380877 IGLV3-32A0A0A0MS00 114 aa10.63□□□□□ -0.71
GABPB1-203ENST00000380877 C7orf66A4D0T2 115 aa10.63□□□□□ -0.71
GABPB1-203ENST00000380877 TMPRSS2O15393 492 aa10.63□□□□□ -0.71
GABPB1-203ENST00000380877 PSMB3P49720 205 aa10.63□□□□□ -0.71
GABPB1-203ENST00000380877 TMPRSS3P57727 454 aa10.63□□□□□ -0.71
GABPB1-203ENST00000380877 SLC2A9Q9NRM0 540 aa10.63□□□□□ -0.71
GABPB1-203ENST00000380877 RPL36A-HNRNPH2H7BZ11 118 aa10.63□□□□□ -0.71
GABPB1-203ENST00000380877 COX5BP10606 129 aa10.63□□□□□ -0.71
GABPB1-203ENST00000380877 ENDOGQ14249 297 aaKnown RBP10.63□□□□□ -0.71
GABPB1-203ENST00000380877 ZNF260Q3ZCT1 412 aa10.63□□□□□ -0.71
GABPB1-203ENST00000380877 H3F3CQ6NXT2 135 aa10.63□□□□□ -0.71
GABPB1-203ENST00000380877 OR11H7Q8NGC8 314 aa10.63□□□□□ -0.71
GABPB1-203ENST00000380877 MALSU1Q96EH3 234 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms