RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 EWSR1Q01844 656 aaKnown RBP eCLIP14.06□□□□□ -0.16
VPS16-203ENST00000380469 DCAF12Q5T6F0 453 aa14.06□□□□□ -0.16
VPS16-203ENST00000380469 ETV3LQ6ZN32 361 aa14.06□□□□□ -0.16
VPS16-203ENST00000380469 UBALD2Q8IYN6 164 aa14.06□□□□□ -0.16
VPS16-203ENST00000380469 OR2C3Q8N628 320 aa14.06□□□□□ -0.16
VPS16-203ENST00000380469 SNIP1Q8TAD8 396 aaKnown RBP14.06□□□□□ -0.16
VPS16-203ENST00000380469 HPSE2Q8WWQ2 592 aa14.06□□□□□ -0.16
VPS16-203ENST00000380469 BOD1Q96IK1 185 aa14.06□□□□□ -0.16
VPS16-203ENST00000380469 SPIN2AQ99865 258 aa14.06□□□□□ -0.16
VPS16-203ENST00000380469 SPIN2BQ9BPZ2 258 aa14.06□□□□□ -0.16
VPS16-203ENST00000380469 SLC7A10Q9NS82 523 aa14.06□□□□□ -0.16
VPS16-203ENST00000380469 DEPPQ9NTK1 212 aa14.06□□□□□ -0.16
VPS16-203ENST00000380469 C1orf196B1AJZ1 125 aa14.06□□□□□ -0.16
VPS16-203ENST00000380469 B4E171 279 aa14.06□□□□□ -0.16
VPS16-203ENST00000380469 M0R036 132 aa14.06□□□□□ -0.16
VPS16-203ENST00000380469 SNRNP70P08621 437 aaKnown RBP14.06□□□□□ -0.16
VPS16-203ENST00000380469 BCL3P20749 454 aa14.06□□□□□ -0.16
VPS16-203ENST00000380469 CCNOP22674 350 aa14.06□□□□□ -0.16
VPS16-203ENST00000380469 GNRHRP30968 328 aa14.06□□□□□ -0.16
VPS16-203ENST00000380469 TSPAN7P41732 249 aa14.06□□□□□ -0.16
VPS16-203ENST00000380469 AKR1C3P42330 323 aa14.06□□□□□ -0.16
VPS16-203ENST00000380469 NKX2-1P43699 371 aaPredicted RBP14.06□□□□□ -0.16
VPS16-203ENST00000380469 NOVA1P51513 510 aaKnown RBP14.06□□□□□ -0.16
VPS16-203ENST00000380469 Q6ZS49 121 aa14.06□□□□□ -0.16
VPS16-203ENST00000380469 TBC1D26Q86UD7 250 aa14.06□□□□□ -0.16
VPS16-203ENST00000380469 Q8NFD4 153 aa14.06□□□□□ -0.16
VPS16-203ENST00000380469 ATPIF1Q9UII2 106 aa14.06□□□□□ -0.16
VPS16-203ENST00000380469 PRSS44E7EML9 344 aa14.05□□□□□ -0.16
VPS16-203ENST00000380469 PTAFRP25105 342 aa14.05□□□□□ -0.16
VPS16-203ENST00000380469 GFRA1P56159 465 aa14.05□□□□□ -0.16
VPS16-203ENST00000380469 SRSF7Q16629 238 aaKnown RBP eCLIP14.05□□□□□ -0.16
VPS16-203ENST00000380469 AWAT1Q58HT5 328 aa14.05□□□□□ -0.16
VPS16-203ENST00000380469 TMEM182Q6ZP80 229 aaPredicted RBP14.05□□□□□ -0.16
VPS16-203ENST00000380469 LFNGQ8NES3 379 aa14.05□□□□□ -0.16
VPS16-203ENST00000380469 OR56B2PQ8NGI1 322 aa14.05□□□□□ -0.16
VPS16-203ENST00000380469 SLAMF9Q96A28 289 aa14.05□□□□□ -0.16
VPS16-203ENST00000380469 TMEM56Q96MV1 263 aa14.05□□□□□ -0.16
VPS16-203ENST00000380469 SCRT1Q9BWW7 348 aa14.05□□□□□ -0.16
VPS16-203ENST00000380469 EGLN1Q9GZT9 426 aa14.05□□□□□ -0.16
VPS16-203ENST00000380469 COA4Q9NYJ1 87 aa14.05□□□□□ -0.16
VPS16-203ENST00000380469 TMEM56-RWDD3S4R434 201 aa14.05□□□□□ -0.16
VPS16-203ENST00000380469 C7orf77A4D0Y5 90 aa14.04□□□□□ -0.16
VPS16-203ENST00000380469 C1QL1O75973 258 aa14.04□□□□□ -0.16
VPS16-203ENST00000380469 ZNF44P15621 663 aa14.04□□□□□ -0.16
VPS16-203ENST00000380469 ARF1P84077 181 aaKnown RBP14.04□□□□□ -0.16
VPS16-203ENST00000380469 PRDX4Q13162 271 aa14.04□□□□□ -0.16
VPS16-203ENST00000380469 ZNF266Q14584 549 aa14.04□□□□□ -0.16
VPS16-203ENST00000380469 SSPNQ14714 243 aa14.04□□□□□ -0.16
VPS16-203ENST00000380469 COLCA1Q6ZS62 124 aa14.04□□□□□ -0.16
VPS16-203ENST00000380469 SAXO1Q8IYX7 474 aa14.04□□□□□ -0.16
VPS16-203ENST00000380469 SFT2D1Q8WV19 159 aa14.04□□□□□ -0.16
VPS16-203ENST00000380469 Q9N2K0 584 aa14.04□□□□□ -0.16
VPS16-203ENST00000380469 BOKQ9UMX3 212 aaPredicted RBP14.04□□□□□ -0.16
VPS16-203ENST00000380469 FAM24AA6NFZ4 105 aa14.04□□□□□ -0.16
VPS16-203ENST00000380469 LINC01387J3KSC0 135 aa14.04□□□□□ -0.16
VPS16-203ENST00000380469 MT-ND4LP03901 98 aa14.04□□□□□ -0.16
VPS16-203ENST00000380469 SERPINA7P05543 415 aa14.04□□□□□ -0.16
VPS16-203ENST00000380469 HAAOP46952 286 aa14.04□□□□□ -0.16
VPS16-203ENST00000380469 DAZAP2Q15038 168 aaPredicted RBP14.04□□□□□ -0.16
VPS16-203ENST00000380469 RNF212Q495C1 297 aa14.04□□□□□ -0.16
VPS16-203ENST00000380469 TRIM61Q5EBN2 209 aa14.04□□□□□ -0.16
VPS16-203ENST00000380469 FAM213BQ8TBF2 198 aa14.04□□□□□ -0.16
VPS16-203ENST00000380469 HIST1H2BAQ96A08 127 aa14.04□□□□□ -0.16
VPS16-203ENST00000380469 REPIN1Q9BWE0 567 aaKnown RBP14.04□□□□□ -0.16
VPS16-203ENST00000380469 SLC25A31Q9H0C2 315 aa14.04□□□□□ -0.16
VPS16-203ENST00000380469 SLC35B3Q9H1N7 401 aa14.04□□□□□ -0.16
VPS16-203ENST00000380469 PLEKHF2Q9H8W4 249 aa14.04□□□□□ -0.16
VPS16-203ENST00000380469 KCNJ16Q9NPI9 418 aa14.04□□□□□ -0.16
VPS16-203ENST00000380469 SHANK1Q9Y566 2161 aa14.04□□□□□ -0.16
VPS16-203ENST00000380469 PINLYPA6NC86 204 aa14.03□□□□□ -0.16
VPS16-203ENST00000380469 UMAD1C9J7I0 102 aa14.03□□□□□ -0.16
VPS16-203ENST00000380469 F10P00742 488 aa14.03□□□□□ -0.16
VPS16-203ENST00000380469 ASCL1P50553 236 aa14.03□□□□□ -0.16
VPS16-203ENST00000380469 GPM6AP51674 278 aa14.03□□□□□ -0.16
VPS16-203ENST00000380469 FGF12P61328 243 aa14.03□□□□□ -0.16
VPS16-203ENST00000380469 RND3P61587 244 aa14.03□□□□□ -0.16
VPS16-203ENST00000380469 VAMP2P63027 116 aa14.03□□□□□ -0.16
VPS16-203ENST00000380469 HABP2Q14520 560 aaPredicted RBP14.03□□□□□ -0.16
VPS16-203ENST00000380469 C6orf15Q6UXA7 325 aaPredicted RBP14.03□□□□□ -0.16
VPS16-203ENST00000380469 MRPL21Q7Z2W9 205 aaKnown RBP14.03□□□□□ -0.16
VPS16-203ENST00000380469 SELENOHQ8IZQ5 122 aaKnown RBP14.03□□□□□ -0.16
VPS16-203ENST00000380469 SUMF1Q8NBK3 374 aa14.03□□□□□ -0.16
VPS16-203ENST00000380469 LINC00470Q9BZP3 86 aa14.03□□□□□ -0.16
VPS16-203ENST00000380469 TUBA4BQ9H853 241 aa14.03□□□□□ -0.16
VPS16-203ENST00000380469 POLR2GP62487 172 aaKnown RBP eCLIP14.03□□□□□ -0.16
VPS16-203ENST00000380469 SRYQ05066 204 aa14.03□□□□□ -0.16
VPS16-203ENST00000380469 FOXO1Q12778 655 aa14.03□□□□□ -0.16
VPS16-203ENST00000380469 CLINT1Q14677 625 aa14.03□□□□□ -0.16
VPS16-203ENST00000380469 ZDHHC23Q8IYP9 409 aa14.03□□□□□ -0.16
VPS16-203ENST00000380469 NEK7Q8TDX7 302 aa14.03□□□□□ -0.16
VPS16-203ENST00000380469 CT55Q8WUE5 264 aa14.03□□□□□ -0.16
VPS16-203ENST00000380469 USB1Q9BQ65 265 aaKnown RBP14.03□□□□□ -0.16
VPS16-203ENST00000380469 FBXO7Q9Y3I1 522 aa14.03□□□□□ -0.16
VPS16-203ENST00000380469 IGKV3D-15A0A087WSY6 115 aa14.02□□□□□ -0.16
VPS16-203ENST00000380469 A0A096LPE4 126 aa14.02□□□□□ -0.16
VPS16-203ENST00000380469 A0A1W2PPZ6 126 aa14.02□□□□□ -0.16
VPS16-203ENST00000380469 C5orf49A4QMS7 147 aa14.02□□□□□ -0.16
VPS16-203ENST00000380469 CEACAM21Q3KPI0 293 aa14.02□□□□□ -0.16
VPS16-203ENST00000380469 C9orf135Q5VTT2 229 aa14.02□□□□□ -0.16
VPS16-203ENST00000380469 PEAR1Q5VY43 1037 aaPredicted RBP14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms