RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 RTBDNQ9BSG5 229 aaPredicted RBP8.19□□□□□ -1.1
PTPRA-204ENST00000380393 GPR27Q9NS67 375 aa8.19□□□□□ -1.1
PTPRA-204ENST00000380393 CLEC4EQ9ULY5 219 aa8.19□□□□□ -1.1
PTPRA-204ENST00000380393 SELENOKQ9Y6D0 94 aa8.19□□□□□ -1.1
PTPRA-204ENST00000380393 TRBV7-9A0A0J9YWB2 115 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 SPAARA0A1B0GVQ0 90 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 C2orf72A6NCS6 295 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 MSTNO14793 375 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 DEDDO75618 318 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 TTRP02766 147 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 FBLP22087 321 aaKnown RBP8.18□□□□□ -1.1
PTPRA-204ENST00000380393 OMGP23515 440 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 GRPRP30550 384 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 TMEM249Q2WGJ8 235 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 HLA-BQ31612 363 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 FFAR4Q5NUL3 377 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 ZNF417Q8TAU3 575 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 DOK4Q8TEW6 326 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 ZNF480Q8WV37 535 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 NKD1Q969G9 470 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 Q96M85 177 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 FAM103A1Q9BTL3 118 aaKnown RBP8.18□□□□□ -1.1
PTPRA-204ENST00000380393 RSG1Q9BU20 258 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 DERL1Q9BUN8 251 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 PHF7Q9BWX1 381 aaPredicted RBP8.18□□□□□ -1.1
PTPRA-204ENST00000380393 METTL7AQ9H8H3 244 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 GNG13Q9P2W3 67 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 B4GALT6Q9UBX8 382 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 ENTPD2Q9Y5L3 495 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 NLRC5Q86WI3 1866 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 WDR87Q6ZQQ6 2873 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 FEZF1A0PJY2 475 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 EPOPA6NHQ4 379 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 ZNF205O95201 554 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 HRASP01112 189 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 ASCL1P50553 236 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 CLDN2P57739 230 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 CSNK1G2P78368 415 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 PMPCAQ10713 525 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 MSMO1Q15800 293 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 CEACAM21Q3KPI0 293 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 TPRG1Q6ZUI0 275 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 PNKDQ8N490 385 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 TMEM217Q8N7C4 229 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 FAM174AQ8TBP5 190 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 FGGYQ96C11 551 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 CCL16O15467 120 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 KLF4O43474 513 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 PLP1P60201 277 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 PDE7AQ13946 482 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 PHYHD1Q5SRE7 291 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 OR8G5Q8NG78 346 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 OR2AE1Q8NHA4 323 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 ZC2HC1AQ96GY0 325 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 KXD1Q9BQD3 176 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 EHFQ9NZC4 300 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 VDAC3Q9Y277 283 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 KIAA2026Q5HYC2 2103 aa8.18□□□□□ -1.1
PTPRA-204ENST00000380393 ZFP92A6NM28 416 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 ZNF716A6NP11 495 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 ALG1L2C9J202 215 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 NPIPA5E9PKD4 350 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 NPIPA3F8WFD2 350 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 MPC1LP0DKB6 136 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 ZNF43P17038 809 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 CSNK2A2P19784 350 aaPredicted RBP8.17□□□□□ -1.1
PTPRA-204ENST00000380393 NCBP2P52298 156 aaKnown RBP eCLIP8.17□□□□□ -1.1
PTPRA-204ENST00000380393 NTHL1P78549 312 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 HIST3H3Q16695 136 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 KIAA1644Q3SXP7 199 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 TXNDC8Q6A555 127 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 CCDC144NLQ6NUI1 221 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 OR5P2Q8WZ92 322 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 TMEM230Q96A57 120 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 RBMXL1Q96E39 390 aaKnown RBP8.17□□□□□ -1.1
PTPRA-204ENST00000380393 ARHGDIGQ99819 225 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 PLEK2Q9NYT0 353 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 KLHL13Q9P2N7 655 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 FBXL7Q9UJT9 491 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 NPIPA1Q9UND3 350 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 GAGE10A6NGK3 116 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 SH2D1BO14796 132 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 IGLC1P0CG04 106 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 CCL2P13500 99 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 DUSP1P28562 367 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 CLDN15P56746 228 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 GTF2H5Q6ZYL4 71 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 OR5B3Q8NH48 314 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 C5orf66Q9H5L9 145 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 GREB1Q4ZG55 1949 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 A0A0U1RQK1 487 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 LOC102723971A0A1B0GUV8 181 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 PDE6DO43924 150 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 NPPBP16860 134 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 AK4P27144 223 aaPredicted RBP8.17□□□□□ -1.1
PTPRA-204ENST00000380393 ARL3P36405 182 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 HOGA1Q86XE5 327 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 LIN37Q96GY3 246 aaPredicted RBP8.17□□□□□ -1.1
PTPRA-204ENST00000380393 MCHR1Q99705 422 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 WNT10AQ9GZT5 417 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms