RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 ZNF587BE7ETH6 402 aa9.38□□□□□ -0.91
NEDD9-201ENST00000379433 NGFP01138 241 aa9.38□□□□□ -0.91
NEDD9-201ENST00000379433 IFNA21P01568 189 aa9.38□□□□□ -0.91
NEDD9-201ENST00000379433 LPLP06858 475 aa9.38□□□□□ -0.91
NEDD9-201ENST00000379433 CSF1P09603 554 aa9.38□□□□□ -0.91
NEDD9-201ENST00000379433 FKBP2P26885 142 aaKnown RBP9.38□□□□□ -0.91
NEDD9-201ENST00000379433 RRADP55042 308 aa9.38□□□□□ -0.91
NEDD9-201ENST00000379433 ZP1P60852 638 aa9.38□□□□□ -0.91
NEDD9-201ENST00000379433 DHODHQ02127 395 aa9.38□□□□□ -0.91
NEDD9-201ENST00000379433 TMEM54Q969K7 222 aa9.38□□□□□ -0.91
NEDD9-201ENST00000379433 TMPRSS13Q9BYE2 586 aa9.38□□□□□ -0.91
NEDD9-201ENST00000379433 ZNF552Q9H707 407 aaPredicted RBP9.38□□□□□ -0.91
NEDD9-201ENST00000379433 NOP16Q9Y3C1 178 aaKnown RBP9.38□□□□□ -0.91
NEDD9-201ENST00000379433 TBL2Q9Y4P3 447 aaKnown RBP9.38□□□□□ -0.91
NEDD9-201ENST00000379433 UBE2QL1A1L167 161 aa9.37□□□□□ -0.91
NEDD9-201ENST00000379433 ZNF503-AS2A6NEH8 195 aa9.37□□□□□ -0.91
NEDD9-201ENST00000379433 MGMTP16455 207 aa9.37□□□□□ -0.91
NEDD9-201ENST00000379433 CSRP1P21291 193 aaKnown RBP9.37□□□□□ -0.91
NEDD9-201ENST00000379433 PLCXD3Q63HM9 321 aa9.37□□□□□ -0.91
NEDD9-201ENST00000379433 FAM180AQ6UWF9 173 aa9.37□□□□□ -0.91
NEDD9-201ENST00000379433 MUC20Q8N307 709 aaPredicted RBP9.37□□□□□ -0.91
NEDD9-201ENST00000379433 C9orf62Q8N4C0 152 aa9.37□□□□□ -0.91
NEDD9-201ENST00000379433 OR14K1Q8NGZ2 314 aa9.37□□□□□ -0.91
NEDD9-201ENST00000379433 APH1AQ96BI3 265 aa9.37□□□□□ -0.91
NEDD9-201ENST00000379433 PGPEP1Q9NXJ5 209 aa9.37□□□□□ -0.91
NEDD9-201ENST00000379433 RAB22AQ9UL26 194 aa9.37□□□□□ -0.91
NEDD9-201ENST00000379433 PTPRQQ9UMZ3 2332 aa9.37□□□□□ -0.91
NEDD9-201ENST00000379433 A0A0A6YYD4 124 aa9.37□□□□□ -0.91
NEDD9-201ENST00000379433 C13orf42A0A1B0GVH6 325 aa9.37□□□□□ -0.91
NEDD9-201ENST00000379433 RAD51DO75771 328 aa9.37□□□□□ -0.91
NEDD9-201ENST00000379433 DHRS3O75911 302 aa9.37□□□□□ -0.91
NEDD9-201ENST00000379433 LYZL6O75951 148 aa9.37□□□□□ -0.91
NEDD9-201ENST00000379433 IFNA10P01566 189 aa9.37□□□□□ -0.91
NEDD9-201ENST00000379433 SPP1P10451 314 aa9.37□□□□□ -0.91
NEDD9-201ENST00000379433 APOBEC3AP31941 199 aaPredicted RBP9.37□□□□□ -0.91
NEDD9-201ENST00000379433 PTGFRP43088 359 aa9.37□□□□□ -0.91
NEDD9-201ENST00000379433 CLDN18P56856 261 aa9.37□□□□□ -0.91
NEDD9-201ENST00000379433 LSM6P62312 80 aaKnown RBP9.37□□□□□ -0.91
NEDD9-201ENST00000379433 RSU1Q15404 277 aa9.37□□□□□ -0.91
NEDD9-201ENST00000379433 PLAC9Q5JTB6 97 aa9.37□□□□□ -0.91
NEDD9-201ENST00000379433 FAM27BQ5VT28 67 aa9.37□□□□□ -0.91
NEDD9-201ENST00000379433 SLC23A1Q9UHI7 598 aa9.37□□□□□ -0.91
NEDD9-201ENST00000379433 PPP1R3CQ9UQK1 317 aa9.37□□□□□ -0.91
NEDD9-201ENST00000379433 ZNF850A8MQ14 1090 aa9.36□□□□□ -0.91
NEDD9-201ENST00000379433 CTDSPLO15194 276 aa9.36□□□□□ -0.91
NEDD9-201ENST00000379433 CDC14BO60729 498 aa9.36□□□□□ -0.91
NEDD9-201ENST00000379433 KNG1P01042 644 aa9.36□□□□□ -0.91
NEDD9-201ENST00000379433 ZNF35P13682 527 aa9.36□□□□□ -0.91
NEDD9-201ENST00000379433 PVALBP20472 110 aaPredicted RBP9.36□□□□□ -0.91
NEDD9-201ENST00000379433 BTG1P62324 171 aa9.36□□□□□ -0.91
NEDD9-201ENST00000379433 MRPS34P82930 218 aaKnown RBP9.36□□□□□ -0.91
NEDD9-201ENST00000379433 FAM166AQ6J272 317 aa9.36□□□□□ -0.91
NEDD9-201ENST00000379433 H3F3CQ6NXT2 135 aa9.36□□□□□ -0.91
NEDD9-201ENST00000379433 CLEC9AQ6UXN8 241 aa9.36□□□□□ -0.91
NEDD9-201ENST00000379433 C5orf24Q7Z6I8 188 aa9.36□□□□□ -0.91
NEDD9-201ENST00000379433 ADAMTS17Q8TE56 1095 aa9.36□□□□□ -0.91
NEDD9-201ENST00000379433 BORCS8Q96FH0 119 aa9.36□□□□□ -0.91
NEDD9-201ENST00000379433 TRIB1Q96RU8 372 aa9.36□□□□□ -0.91
NEDD9-201ENST00000379433 BCO1Q9HAY6 547 aa9.36□□□□□ -0.91
NEDD9-201ENST00000379433 PLEKHJ1Q9NW61 149 aa9.36□□□□□ -0.91
NEDD9-201ENST00000379433 TRGV5A0A0B4J1U4 118 aa9.36□□□□□ -0.91
NEDD9-201ENST00000379433 NDUFB6O95139 128 aa9.36□□□□□ -0.91
NEDD9-201ENST00000379433 HLA-AP01891 365 aaKnown RBP9.36□□□□□ -0.91
NEDD9-201ENST00000379433 PGAM2P15259 253 aa9.36□□□□□ -0.91
NEDD9-201ENST00000379433 FSTP19883 344 aa9.36□□□□□ -0.91
NEDD9-201ENST00000379433 TAS2R19P59542 299 aa9.36□□□□□ -0.91
NEDD9-201ENST00000379433 RAB1AP62820 205 aa9.36□□□□□ -0.91
NEDD9-201ENST00000379433 GK2Q14410 553 aaPredicted RBP9.36□□□□□ -0.91
NEDD9-201ENST00000379433 PIGYQ3MUY2 71 aa9.36□□□□□ -0.91
NEDD9-201ENST00000379433 DCAF12L2Q5VW00 463 aa9.36□□□□□ -0.91
NEDD9-201ENST00000379433 BHLHA15Q7RTS1 189 aaPredicted RBP9.36□□□□□ -0.91
NEDD9-201ENST00000379433 OR10R2Q8NGX6 335 aa9.36□□□□□ -0.91
NEDD9-201ENST00000379433 GPX8Q8TED1 209 aa9.36□□□□□ -0.91
NEDD9-201ENST00000379433 RNF125Q96EQ8 232 aa9.36□□□□□ -0.91
NEDD9-201ENST00000379433 ADGRG7Q96K78 797 aa9.36□□□□□ -0.91
NEDD9-201ENST00000379433 OR2H1Q9GZK4 316 aa9.36□□□□□ -0.91
NEDD9-201ENST00000379433 PURGQ9UJV8 347 aaKnown RBP9.36□□□□□ -0.91
NEDD9-201ENST00000379433 TIMM10BQ9Y5J6 103 aa9.36□□□□□ -0.91
NEDD9-201ENST00000379433 FAM74A7A6NL05 159 aa9.36□□□□□ -0.91
NEDD9-201ENST00000379433 SELEP16581 610 aa9.36□□□□□ -0.91
NEDD9-201ENST00000379433 DEFA5Q01523 94 aa9.36□□□□□ -0.91
NEDD9-201ENST00000379433 FAM74A3Q4VXF1 159 aa9.36□□□□□ -0.91
NEDD9-201ENST00000379433 OR4K15Q8NH41 348 aa9.36□□□□□ -0.91
NEDD9-201ENST00000379433 MARCH1Q8TCQ1 289 aa9.36□□□□□ -0.91
NEDD9-201ENST00000379433 ERGIC1Q969X5 290 aa9.36□□□□□ -0.91
NEDD9-201ENST00000379433 ZNF436Q9C0F3 470 aaPredicted RBP9.36□□□□□ -0.91
NEDD9-201ENST00000379433 LPAR5Q9H1C0 372 aa9.36□□□□□ -0.91
NEDD9-201ENST00000379433 KLF13Q9Y2Y9 288 aaPredicted RBP9.36□□□□□ -0.91
NEDD9-201ENST00000379433 MRPS18CQ9Y3D5 142 aaKnown RBP9.36□□□□□ -0.91
NEDD9-201ENST00000379433 KALRNO60229 2985 aa9.35□□□□□ -0.91
NEDD9-201ENST00000379433 KRBOX1C9JBD0 128 aa9.35□□□□□ -0.91
NEDD9-201ENST00000379433 DNASE2O00115 360 aaPredicted RBP9.35□□□□□ -0.91
NEDD9-201ENST00000379433 C1QBP02746 253 aa9.35□□□□□ -0.91
NEDD9-201ENST00000379433 AMY2BP19961 511 aa9.35□□□□□ -0.91
NEDD9-201ENST00000379433 GZMHP20718 246 aa9.35□□□□□ -0.91
NEDD9-201ENST00000379433 OR3A2P47893 321 aa9.35□□□□□ -0.91
NEDD9-201ENST00000379433 CSRP2Q16527 193 aa9.35□□□□□ -0.91
NEDD9-201ENST00000379433 C10orf128Q5T292 105 aa9.35□□□□□ -0.91
NEDD9-201ENST00000379433 TCTEX1D2Q8WW35 142 aa9.35□□□□□ -0.91
NEDD9-201ENST00000379433 FAAP24Q9BTP7 215 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms