RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 ST3GAL2Q16842 350 aa15.66■□□□□ 0.1
CLSTN1-202ENST00000377298 WNT2BQ93097 391 aa15.66■□□□□ 0.1
CLSTN1-202ENST00000377298 SLC7A10Q9NS82 523 aa15.66■□□□□ 0.1
CLSTN1-202ENST00000377298 A0A0U1RQV5 110 aa15.66■□□□□ 0.1
CLSTN1-202ENST00000377298 A0A1W2PN81 502 aa15.66■□□□□ 0.1
CLSTN1-202ENST00000377298 ATXN7O15265 892 aaPredicted RBP15.66■□□□□ 0.1
CLSTN1-202ENST00000377298 GCM2O75603 506 aaPredicted RBP15.66■□□□□ 0.1
CLSTN1-202ENST00000377298 METTL15P1P0C7V9 234 aa15.66■□□□□ 0.1
CLSTN1-202ENST00000377298 CHRNA7P36544 502 aa15.66■□□□□ 0.1
CLSTN1-202ENST00000377298 KCNK15Q9H427 330 aa15.66■□□□□ 0.1
CLSTN1-202ENST00000377298 TIMM9Q9Y5J7 89 aa15.66■□□□□ 0.1
CLSTN1-202ENST00000377298 RTP5Q14D33 572 aa15.66■□□□□ 0.1
CLSTN1-202ENST00000377298 GGNBP1Q5YKI7 109 aa15.66■□□□□ 0.1
CLSTN1-202ENST00000377298 BAGE3Q86Y29 109 aa15.66■□□□□ 0.1
CLSTN1-202ENST00000377298 BAGE2Q86Y30 109 aa15.66■□□□□ 0.1
CLSTN1-202ENST00000377298 THYN1Q9P016 225 aa15.66■□□□□ 0.1
CLSTN1-202ENST00000377298 CACNG5Q9UF02 275 aa15.66■□□□□ 0.1
CLSTN1-202ENST00000377298 B3GALNT1O75752 331 aa15.65■□□□□ 0.1
CLSTN1-202ENST00000377298 FBP1P09467 338 aa15.65■□□□□ 0.1
CLSTN1-202ENST00000377298 OR5AC1P0C628 307 aa15.65■□□□□ 0.1
CLSTN1-202ENST00000377298 ID4P47928 161 aa15.65■□□□□ 0.1
CLSTN1-202ENST00000377298 ENDOGQ14249 297 aaKnown RBP15.65■□□□□ 0.1
CLSTN1-202ENST00000377298 HLXQ14774 488 aaPredicted RBP15.65■□□□□ 0.1
CLSTN1-202ENST00000377298 ST6GALNAC2Q9UJ37 374 aa15.65■□□□□ 0.1
CLSTN1-202ENST00000377298 CST4P01036 141 aa15.65■□□□□ 0.1
CLSTN1-202ENST00000377298 SLC25A4P12235 298 aa15.65■□□□□ 0.1
CLSTN1-202ENST00000377298 IL11P20809 199 aa15.65■□□□□ 0.1
CLSTN1-202ENST00000377298 OR2J1Q9GZK6 312 aa15.65■□□□□ 0.1
CLSTN1-202ENST00000377298 NINQ8N4C6 2090 aa15.65■□□□□ 0.1
CLSTN1-202ENST00000377298 BRS3P32247 399 aa15.65■□□□□ 0.1
CLSTN1-202ENST00000377298 PSG4Q00888 419 aa15.65■□□□□ 0.1
CLSTN1-202ENST00000377298 INPP5JQ15735 1006 aaPredicted RBP15.65■□□□□ 0.1
CLSTN1-202ENST00000377298 SEBOXQ9HB31 216 aaPredicted RBP15.65■□□□□ 0.1
CLSTN1-202ENST00000377298 IL17BQ9UHF5 180 aa15.65■□□□□ 0.1
CLSTN1-202ENST00000377298 RGS13O14921 159 aa15.65■□□□□ 0.1
CLSTN1-202ENST00000377298 LANCL1O43813 399 aa15.65■□□□□ 0.1
CLSTN1-202ENST00000377298 ONECUT2O95948 504 aa15.65■□□□□ 0.1
CLSTN1-202ENST00000377298 TTRP02766 147 aa15.65■□□□□ 0.1
CLSTN1-202ENST00000377298 PGA4P0DJD7 388 aa15.65■□□□□ 0.1
CLSTN1-202ENST00000377298 A0A1W2PNV4 684 aa15.64■□□□□ 0.09
CLSTN1-202ENST00000377298 XKRY2A2RUG3 117 aa15.64■□□□□ 0.09
CLSTN1-202ENST00000377298 HOXB1P14653 301 aaPredicted RBP15.64■□□□□ 0.09
CLSTN1-202ENST00000377298 DUSP18Q8NEJ0 188 aa15.64■□□□□ 0.09
CLSTN1-202ENST00000377298 ADAT3Q96EY9 351 aaPredicted RBP15.64■□□□□ 0.09
CLSTN1-202ENST00000377298 GAB2Q9UQC2 676 aa15.64■□□□□ 0.09
CLSTN1-202ENST00000377298 PPP5D1E7EU14 171 aa15.64■□□□□ 0.09
CLSTN1-202ENST00000377298 IL13RA2Q14627 380 aa15.64■□□□□ 0.09
CLSTN1-202ENST00000377298 TMEM91Q6ZNR0 172 aa15.64■□□□□ 0.09
CLSTN1-202ENST00000377298 RPUSD4Q96CM3 377 aaKnown RBP15.64■□□□□ 0.09
CLSTN1-202ENST00000377298 HEXA-AS1Q9H8Q6 139 aa15.64■□□□□ 0.09
CLSTN1-202ENST00000377298 TUBG2Q9NRH3 451 aa15.64■□□□□ 0.09
CLSTN1-202ENST00000377298 ZNF835Q9Y2P0 537 aa15.64■□□□□ 0.09
CLSTN1-202ENST00000377298 VSIG8P0DPA2 414 aa15.64■□□□□ 0.09
CLSTN1-202ENST00000377298 OPRK1P41145 380 aa15.64■□□□□ 0.09
CLSTN1-202ENST00000377298 AKR1C3P42330 323 aa15.64■□□□□ 0.09
CLSTN1-202ENST00000377298 KCNK17Q96T54 332 aa15.64■□□□□ 0.09
CLSTN1-202ENST00000377298 C20orf24Q9BUV8 137 aa15.64■□□□□ 0.09
CLSTN1-202ENST00000377298 SLC35D1Q9NTN3 355 aa15.64■□□□□ 0.09
CLSTN1-202ENST00000377298 ZDBF2Q9HCK1 2354 aa15.64■□□□□ 0.09
CLSTN1-202ENST00000377298 IGKV3-11P04433 115 aa15.64■□□□□ 0.09
CLSTN1-202ENST00000377298 ADAM5Q6NVV9 412 aa15.64■□□□□ 0.09
CLSTN1-202ENST00000377298 MSL2Q9HCI7 577 aa15.64■□□□□ 0.09
CLSTN1-202ENST00000377298 COX6B1P14854 86 aa15.63■□□□□ 0.09
CLSTN1-202ENST00000377298 SLC38A11Q08AI6 406 aa15.63■□□□□ 0.09
CLSTN1-202ENST00000377298 Q56UQ5 140 aa15.63■□□□□ 0.09
CLSTN1-202ENST00000377298 DIRC2Q96SL1 478 aa15.63■□□□□ 0.09
CLSTN1-202ENST00000377298 DCTN6O00399 190 aa15.63■□□□□ 0.09
CLSTN1-202ENST00000377298 PMELP40967 661 aa15.63■□□□□ 0.09
CLSTN1-202ENST00000377298 SLC25A47Q6Q0C1 308 aa15.63■□□□□ 0.09
CLSTN1-202ENST00000377298 BPIFCQ8NFQ6 507 aa15.63■□□□□ 0.09
CLSTN1-202ENST00000377298 RXFP4Q8TDU9 374 aa15.63■□□□□ 0.09
CLSTN1-202ENST00000377298 C2CD4CQ8TF44 421 aa15.63■□□□□ 0.09
CLSTN1-202ENST00000377298 SMIM7Q9BQ49 75 aa15.63■□□□□ 0.09
CLSTN1-202ENST00000377298 NUDT16L1Q9BRJ7 211 aaKnown RBP15.63■□□□□ 0.09
CLSTN1-202ENST00000377298 TNFRSF19Q9NS68 423 aa15.63■□□□□ 0.09
CLSTN1-202ENST00000377298 KCNE5Q9UJ90 142 aa15.63■□□□□ 0.09
CLSTN1-202ENST00000377298 V9GYH0 126 aa15.63■□□□□ 0.09
CLSTN1-202ENST00000377298 MGAT2Q10469 447 aa15.63■□□□□ 0.09
CLSTN1-202ENST00000377298 PTX4Q96A99 478 aa15.63■□□□□ 0.09
CLSTN1-202ENST00000377298 CXorf58Q96LI9 332 aa15.63■□□□□ 0.09
CLSTN1-202ENST00000377298 RBP4P02753 201 aa15.63■□□□□ 0.09
CLSTN1-202ENST00000377298 BTNL8Q6UX41 500 aa15.63■□□□□ 0.09
CLSTN1-202ENST00000377298 DPF1Q92782 380 aa15.63■□□□□ 0.09
CLSTN1-202ENST00000377298 CHRDL1Q9BU40 450 aa15.63■□□□□ 0.09
CLSTN1-202ENST00000377298 NIT2Q9NQR4 276 aa15.63■□□□□ 0.09
CLSTN1-202ENST00000377298 LPAR3Q9UBY5 353 aa15.63■□□□□ 0.09
CLSTN1-202ENST00000377298 KLHDC2Q9Y2U9 406 aa15.63■□□□□ 0.09
CLSTN1-202ENST00000377298 URGCP-MRPS24S4R325 110 aa15.63■□□□□ 0.09
CLSTN1-202ENST00000377298 TIAF1O95411 115 aa15.62■□□□□ 0.09
CLSTN1-202ENST00000377298 SLC6A1P30531 599 aa15.62■□□□□ 0.09
CLSTN1-202ENST00000377298 IFITM3Q01628 133 aa15.62■□□□□ 0.09
CLSTN1-202ENST00000377298 RIPPLY2Q5TAB7 128 aa15.62■□□□□ 0.09
CLSTN1-202ENST00000377298 CDCP2Q5VXM1 449 aa15.62■□□□□ 0.09
CLSTN1-202ENST00000377298 CBR1P16152 277 aa15.62■□□□□ 0.09
CLSTN1-202ENST00000377298 ZP3P21754 424 aa15.62■□□□□ 0.09
CLSTN1-202ENST00000377298 NDUFA6P56556 154 aa15.62■□□□□ 0.09
CLSTN1-202ENST00000377298 RAB32Q13637 225 aa15.62■□□□□ 0.09
CLSTN1-202ENST00000377298 PPP1R32Q7Z5V6 425 aa15.62■□□□□ 0.09
CLSTN1-202ENST00000377298 ZNF439Q8NDP4 499 aa15.62■□□□□ 0.09
CLSTN1-202ENST00000377298 MISP3Q96FF7 219 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms