RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 VDAC2P45880 294 aaPredicted RBP16.9■□□□□ 0.3
VSX1-201ENST00000376707 SCN1BQ07699 218 aa16.9■□□□□ 0.3
VSX1-201ENST00000376707 LPCAT4Q643R3 524 aa16.9■□□□□ 0.3
VSX1-201ENST00000376707 RNF144BQ7Z419 303 aa16.9■□□□□ 0.3
VSX1-201ENST00000376707 SERPINA12Q8IW75 414 aa16.9■□□□□ 0.3
VSX1-201ENST00000376707 ABHD12Q8N2K0 398 aa16.9■□□□□ 0.3
VSX1-201ENST00000376707 OR4P4Q8NGL7 312 aa16.9■□□□□ 0.3
VSX1-201ENST00000376707 R3HDM4Q96D70 268 aa16.9■□□□□ 0.3
VSX1-201ENST00000376707 CITED2Q99967 270 aaPredicted RBP16.9■□□□□ 0.3
VSX1-201ENST00000376707 WNT10AQ9GZT5 417 aa16.9■□□□□ 0.3
VSX1-201ENST00000376707 SMPD3Q9NY59 655 aaPredicted RBP16.9■□□□□ 0.3
VSX1-201ENST00000376707 FAM90A22PA8MWA6 464 aa16.89■□□□□ 0.29
VSX1-201ENST00000376707 XPNPEP2O43895 674 aa16.89■□□□□ 0.29
VSX1-201ENST00000376707 WBP4O75554 376 aaKnown RBP16.89■□□□□ 0.29
VSX1-201ENST00000376707 LIMS3P0CW19 117 aa16.89■□□□□ 0.29
VSX1-201ENST00000376707 LIMS4P0CW20 117 aa16.89■□□□□ 0.29
VSX1-201ENST00000376707 CDK2P24941 298 aa16.89■□□□□ 0.29
VSX1-201ENST00000376707 LMO1P25800 156 aa16.89■□□□□ 0.29
VSX1-201ENST00000376707 GBX2P52951 348 aaPredicted RBP16.89■□□□□ 0.29
VSX1-201ENST00000376707 AESQ08117 197 aa16.89■□□□□ 0.29
VSX1-201ENST00000376707 ZSCAN26Q16670 478 aa16.89■□□□□ 0.29
VSX1-201ENST00000376707 KPRPQ5T749 579 aaPredicted RBP16.89■□□□□ 0.29
VSX1-201ENST00000376707 Q6ZS46 218 aa16.89■□□□□ 0.29
VSX1-201ENST00000376707 RTN4RL2Q86UN3 420 aa16.89■□□□□ 0.29
VSX1-201ENST00000376707 OR4F17Q8NGA8 305 aa16.89■□□□□ 0.29
VSX1-201ENST00000376707 OR5D14Q8NGL3 314 aa16.89■□□□□ 0.29
VSX1-201ENST00000376707 OR5AK2Q8NH90 309 aa16.89■□□□□ 0.29
VSX1-201ENST00000376707 ZNF596Q8TC21 504 aa16.89■□□□□ 0.29
VSX1-201ENST00000376707 OR4F4Q96R69 305 aa16.89■□□□□ 0.29
VSX1-201ENST00000376707 PDCD1LG2Q9BQ51 273 aa16.89■□□□□ 0.29
VSX1-201ENST00000376707 COMMD4Q9H0A8 199 aa16.89■□□□□ 0.29
VSX1-201ENST00000376707 MMP28Q9H239 520 aa16.89■□□□□ 0.29
VSX1-201ENST00000376707 FGF20Q9NP95 211 aaPredicted RBP16.89■□□□□ 0.29
VSX1-201ENST00000376707 TAS2R3Q9NYW6 316 aa16.89■□□□□ 0.29
VSX1-201ENST00000376707 DPM3Q9P2X0 92 aa16.89■□□□□ 0.29
VSX1-201ENST00000376707 SULT1B1O43704 296 aa16.88■□□□□ 0.29
VSX1-201ENST00000376707 BAG2O95816 211 aa16.88■□□□□ 0.29
VSX1-201ENST00000376707 BRS3P32247 399 aa16.88■□□□□ 0.29
VSX1-201ENST00000376707 GLIPR1P48060 266 aa16.88■□□□□ 0.29
VSX1-201ENST00000376707 ARHGDIBP52566 201 aa16.88■□□□□ 0.29
VSX1-201ENST00000376707 BDH1Q02338 343 aa16.88■□□□□ 0.29
VSX1-201ENST00000376707 TMEM95Q3KNT9 176 aa16.88■□□□□ 0.29
VSX1-201ENST00000376707 BAIAP2L2Q6UXY1 529 aa16.88■□□□□ 0.29
VSX1-201ENST00000376707 HEPN1Q6WQI6 88 aa16.88■□□□□ 0.29
VSX1-201ENST00000376707 ZNF555Q8NEP9 628 aa16.88■□□□□ 0.29
VSX1-201ENST00000376707 WIPF2Q8TF74 440 aaPredicted RBP16.88■□□□□ 0.29
VSX1-201ENST00000376707 CAPSLQ8WWF8 208 aa16.88■□□□□ 0.29
VSX1-201ENST00000376707 CORO2AQ92828 525 aa16.88■□□□□ 0.29
VSX1-201ENST00000376707 STMN2Q93045 179 aa16.88■□□□□ 0.29
VSX1-201ENST00000376707 AKR1E2Q96JD6 320 aa16.88■□□□□ 0.29
VSX1-201ENST00000376707 ODAMA1E959 279 aa16.87■□□□□ 0.29
VSX1-201ENST00000376707 FAM172BPA6NC97 362 aa16.87■□□□□ 0.29
VSX1-201ENST00000376707 HCKP08631 526 aa16.87■□□□□ 0.29
VSX1-201ENST00000376707 ZP1P60852 638 aa16.87■□□□□ 0.29
VSX1-201ENST00000376707 KISS1Q15726 138 aa16.87■□□□□ 0.29
VSX1-201ENST00000376707 ZNF529Q6P280 563 aa16.87■□□□□ 0.29
VSX1-201ENST00000376707 C16orf82Q7Z2V1 217 aa16.87■□□□□ 0.29
VSX1-201ENST00000376707 CHST4Q8NCG5 386 aa16.87■□□□□ 0.29
VSX1-201ENST00000376707 ING3Q9NXR8 418 aa16.87■□□□□ 0.29
VSX1-201ENST00000376707 DHDHQ9UQ10 334 aa16.87■□□□□ 0.29
VSX1-201ENST00000376707 LEUTXA8MZ59 168 aa16.86■□□□□ 0.29
VSX1-201ENST00000376707 DEGS1O15121 323 aa16.86■□□□□ 0.29
VSX1-201ENST00000376707 PRB2P02812 416 aaPredicted RBP16.86■□□□□ 0.29
VSX1-201ENST00000376707 CSN2P05814 226 aa16.86■□□□□ 0.29
VSX1-201ENST00000376707 TMEM225BP0DP42 221 aa16.86■□□□□ 0.29
VSX1-201ENST00000376707 CD24P25063 80 aa16.86■□□□□ 0.29
VSX1-201ENST00000376707 DCKP27707 260 aa16.86■□□□□ 0.29
VSX1-201ENST00000376707 PTGFRP43088 359 aa16.86■□□□□ 0.29
VSX1-201ENST00000376707 SMN1Q16637 294 aaKnown RBP16.86■□□□□ 0.29
VSX1-201ENST00000376707 CCDC58Q4VC31 144 aa16.86■□□□□ 0.29
VSX1-201ENST00000376707 KRBOX4Q5JUW0 171 aa16.86■□□□□ 0.29
VSX1-201ENST00000376707 OR4D6Q8NGJ1 314 aa16.86■□□□□ 0.29
VSX1-201ENST00000376707 LIN7BQ9HAP6 207 aa16.86■□□□□ 0.29
VSX1-201ENST00000376707 ADARB2-AS1A8MUL3 147 aa16.85■□□□□ 0.29
VSX1-201ENST00000376707 TOR1AO14656 332 aa16.85■□□□□ 0.29
VSX1-201ENST00000376707 CEACAM3P40198 252 aa16.85■□□□□ 0.29
VSX1-201ENST00000376707 GTF2A1P52655 376 aaPredicted RBP16.85■□□□□ 0.29
VSX1-201ENST00000376707 ATXN7L3Q14CW9 347 aaPredicted RBP16.85■□□□□ 0.29
VSX1-201ENST00000376707 OXLD1Q5BKU9 147 aa16.85■□□□□ 0.29
VSX1-201ENST00000376707 ZNF691Q5VV52 312 aa16.85■□□□□ 0.29
VSX1-201ENST00000376707 Q6P435 159 aa16.85■□□□□ 0.29
VSX1-201ENST00000376707 REC114Q7Z4M0 266 aa16.85■□□□□ 0.29
VSX1-201ENST00000376707 OR5AU1Q8NGC0 362 aa16.85■□□□□ 0.29
VSX1-201ENST00000376707 TSEN15Q8WW01 171 aaKnown RBP16.85■□□□□ 0.29
VSX1-201ENST00000376707 RGP1Q92546 391 aaPredicted RBP16.85■□□□□ 0.29
VSX1-201ENST00000376707 CREB3L1Q96BA8 519 aa16.85■□□□□ 0.29
VSX1-201ENST00000376707 OCSTAMPQ9BR26 566 aa16.85■□□□□ 0.29
VSX1-201ENST00000376707 ZNF286AQ9HBT8 521 aa16.85■□□□□ 0.29
VSX1-201ENST00000376707 C8orf4Q9NR00 106 aa16.85■□□□□ 0.29
VSX1-201ENST00000376707 SLC33A1O00400 549 aaPredicted RBP16.84■□□□□ 0.29
VSX1-201ENST00000376707 IGLV1-47P01700 117 aa16.84■□□□□ 0.29
VSX1-201ENST00000376707 CD34P28906 385 aa16.84■□□□□ 0.29
VSX1-201ENST00000376707 GDNFP39905 211 aa16.84■□□□□ 0.29
VSX1-201ENST00000376707 ETV1P50549 477 aa16.84■□□□□ 0.29
VSX1-201ENST00000376707 ELP2Q6IA86 826 aa16.84■□□□□ 0.29
VSX1-201ENST00000376707 RPL22L1Q6P5R6 122 aaKnown RBP16.84■□□□□ 0.29
VSX1-201ENST00000376707 PXT1Q8NFP0 134 aa16.84■□□□□ 0.29
VSX1-201ENST00000376707 CPNE2Q96FN4 548 aaPredicted RBP16.84■□□□□ 0.29
VSX1-201ENST00000376707 COQ2Q96H96 371 aa16.84■□□□□ 0.29
VSX1-201ENST00000376707 OR6C3Q9NZP0 311 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms