RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 POLR2HP52434 150 aaKnown RBP11.22□□□□□ -0.61
MSH5-204ENST00000375755 AK3Q9UIJ7 227 aa11.22□□□□□ -0.61
MSH5-204ENST00000375755 NPIPA1Q9UND3 350 aa11.22□□□□□ -0.61
MSH5-204ENST00000375755 KNTC1P50748 2209 aa11.21□□□□□ -0.61
MSH5-204ENST00000375755 PRRC2CQ9Y520 2896 aaKnown RBP11.21□□□□□ -0.61
MSH5-204ENST00000375755 GEMIN2O14893 280 aaKnown RBP11.21□□□□□ -0.61
MSH5-204ENST00000375755 EWSR1Q01844 656 aaKnown RBP eCLIP11.21□□□□□ -0.61
MSH5-204ENST00000375755 RELQ04864 619 aaPredicted RBP11.21□□□□□ -0.61
MSH5-204ENST00000375755 IL11RAQ14626 422 aa11.21□□□□□ -0.61
MSH5-204ENST00000375755 FBXW12Q6X9E4 464 aa11.21□□□□□ -0.61
MSH5-204ENST00000375755 NAXEQ8NCW5 288 aa11.21□□□□□ -0.61
MSH5-204ENST00000375755 OR8B12Q8NGG6 310 aa11.21□□□□□ -0.61
MSH5-204ENST00000375755 NPRL2Q8WTW4 380 aa11.21□□□□□ -0.61
MSH5-204ENST00000375755 TOMM40LQ969M1 308 aa11.21□□□□□ -0.61
MSH5-204ENST00000375755 A6NIZ1 184 aa11.21□□□□□ -0.62
MSH5-204ENST00000375755 MSTNO14793 375 aa11.21□□□□□ -0.62
MSH5-204ENST00000375755 CYTIPO60759 359 aa11.21□□□□□ -0.62
MSH5-204ENST00000375755 IL18BPO95998 194 aa11.21□□□□□ -0.62
MSH5-204ENST00000375755 DBHP09172 617 aa11.21□□□□□ -0.62
MSH5-204ENST00000375755 RAP1BP61224 184 aa11.21□□□□□ -0.62
MSH5-204ENST00000375755 FOXF1Q12946 379 aa11.21□□□□□ -0.62
MSH5-204ENST00000375755 IL13RA2Q14627 380 aa11.21□□□□□ -0.62
MSH5-204ENST00000375755 CRIP3Q6Q6R5 217 aa11.21□□□□□ -0.62
MSH5-204ENST00000375755 ZNF248Q8NDW4 579 aa11.21□□□□□ -0.62
MSH5-204ENST00000375755 SNIP1Q8TAD8 396 aaKnown RBP11.21□□□□□ -0.62
MSH5-204ENST00000375755 OIT3Q8WWZ8 545 aa11.21□□□□□ -0.62
MSH5-204ENST00000375755 RAB24Q969Q5 203 aa11.21□□□□□ -0.62
MSH5-204ENST00000375755 RCC1LQ96I51 464 aaKnown RBP11.21□□□□□ -0.62
MSH5-204ENST00000375755 RASL10BQ96S79 203 aa11.21□□□□□ -0.62
MSH5-204ENST00000375755 HSF4Q9ULV5 492 aa11.21□□□□□ -0.62
MSH5-204ENST00000375755 CACNA1HO95180 2353 aa11.21□□□□□ -0.62
MSH5-204ENST00000375755 PCSK5Q92824 1860 aa11.2□□□□□ -0.62
MSH5-204ENST00000375755 MBP02144 154 aa11.2□□□□□ -0.62
MSH5-204ENST00000375755 FUT3P21217 361 aa11.2□□□□□ -0.62
MSH5-204ENST00000375755 CSNK1A1P48729 337 aa11.2□□□□□ -0.62
MSH5-204ENST00000375755 ZNF506Q5JVG8 444 aa11.2□□□□□ -0.62
MSH5-204ENST00000375755 SP5Q6BEB4 398 aaPredicted RBP11.2□□□□□ -0.62
MSH5-204ENST00000375755 C6orf201Q7Z4U5 140 aa11.2□□□□□ -0.62
MSH5-204ENST00000375755 SLC35E3Q7Z769 313 aa11.2□□□□□ -0.62
MSH5-204ENST00000375755 C1orf87Q8N0U7 546 aa11.2□□□□□ -0.62
MSH5-204ENST00000375755 OR6X1Q8NH79 312 aa11.2□□□□□ -0.62
MSH5-204ENST00000375755 SSC4DQ8WTU2 575 aa11.2□□□□□ -0.62
MSH5-204ENST00000375755 NOL4LQ96MY1 436 aaPredicted RBP11.2□□□□□ -0.62
MSH5-204ENST00000375755 EMC6Q9BV81 110 aa11.2□□□□□ -0.62
MSH5-204ENST00000375755 DDA1Q9BW61 102 aa11.2□□□□□ -0.62
MSH5-204ENST00000375755 NAA60Q9H7X0 242 aa11.2□□□□□ -0.62
MSH5-204ENST00000375755 CCDC187A0A096LP49 1063 aa11.2□□□□□ -0.62
MSH5-204ENST00000375755 FAM24AA6NFZ4 105 aa11.2□□□□□ -0.62
MSH5-204ENST00000375755 DVL1O14640 695 aa11.2□□□□□ -0.62
MSH5-204ENST00000375755 ST8SIA3O43173 380 aa11.2□□□□□ -0.62
MSH5-204ENST00000375755 ONECUT2O95948 504 aa11.2□□□□□ -0.62
MSH5-204ENST00000375755 AMBPP02760 352 aa11.2□□□□□ -0.62
MSH5-204ENST00000375755 HSPB1P04792 205 aaKnown RBP11.2□□□□□ -0.62
MSH5-204ENST00000375755 ZNF43P17038 809 aa11.2□□□□□ -0.62
MSH5-204ENST00000375755 ECI1P42126 302 aa11.2□□□□□ -0.62
MSH5-204ENST00000375755 POU3F1Q03052 451 aaPredicted RBP11.2□□□□□ -0.62
MSH5-204ENST00000375755 GRINAQ7Z429 371 aa11.2□□□□□ -0.62
MSH5-204ENST00000375755 BOD1Q96IK1 185 aa11.2□□□□□ -0.62
MSH5-204ENST00000375755 DEFB126Q9BYW3 111 aa11.2□□□□□ -0.62
MSH5-204ENST00000375755 DECR2Q9NUI1 292 aa11.2□□□□□ -0.62
MSH5-204ENST00000375755 RRP8O43159 456 aaKnown RBP11.2□□□□□ -0.62
MSH5-204ENST00000375755 ZFAND5O76080 213 aa11.2□□□□□ -0.62
MSH5-204ENST00000375755 HLA-DRB3P79483 266 aa11.2□□□□□ -0.62
MSH5-204ENST00000375755 TNFRSF9Q07011 255 aa11.2□□□□□ -0.62
MSH5-204ENST00000375755 FAM189A2Q15884 450 aa11.2□□□□□ -0.62
MSH5-204ENST00000375755 BEND2Q8NDZ0 799 aa11.2□□□□□ -0.62
MSH5-204ENST00000375755 RTN4IP1Q8WWV3 396 aaPredicted RBP11.2□□□□□ -0.62
MSH5-204ENST00000375755 C18orf12Q96KH6 178 aa11.2□□□□□ -0.62
MSH5-204ENST00000375755 OR14J1Q9UGF5 321 aa11.2□□□□□ -0.62
MSH5-204ENST00000375755 PITPNC1Q9UKF7 332 aa11.2□□□□□ -0.62
MSH5-204ENST00000375755 IGHV1-45A0A0A0MS14 117 aa11.19□□□□□ -0.62
MSH5-204ENST00000375755 A0A1W2PNU3 283 aaPredicted RBP11.19□□□□□ -0.62
MSH5-204ENST00000375755 SERPINE3A8MV23 424 aa11.19□□□□□ -0.62
MSH5-204ENST00000375755 TMEM225BP0DP42 221 aa11.19□□□□□ -0.62
MSH5-204ENST00000375755 COX6A1P12074 109 aa11.19□□□□□ -0.62
MSH5-204ENST00000375755 DUSP1P28562 367 aa11.19□□□□□ -0.62
MSH5-204ENST00000375755 DUSP3P51452 185 aaPredicted RBP11.19□□□□□ -0.62
MSH5-204ENST00000375755 ZNF121P58317 390 aaPredicted RBP11.19□□□□□ -0.62
MSH5-204ENST00000375755 PHLDA2Q53GA4 152 aa11.19□□□□□ -0.62
MSH5-204ENST00000375755 P4HA3Q7Z4N8 544 aa11.19□□□□□ -0.62
MSH5-204ENST00000375755 FBXL14Q8N1E6 418 aa11.19□□□□□ -0.62
MSH5-204ENST00000375755 OR8G5Q8NG78 346 aa11.19□□□□□ -0.62
MSH5-204ENST00000375755 METTL7AQ9H8H3 244 aa11.19□□□□□ -0.62
MSH5-204ENST00000375755 EP300Q09472 2414 aaPredicted RBP11.19□□□□□ -0.62
MSH5-204ENST00000375755 IGSF23A1L1A6 192 aa11.19□□□□□ -0.62
MSH5-204ENST00000375755 OMGP23515 440 aa11.19□□□□□ -0.62
MSH5-204ENST00000375755 C17orf67Q0P5P2 114 aa11.19□□□□□ -0.62
MSH5-204ENST00000375755 KISS1Q15726 138 aa11.19□□□□□ -0.62
MSH5-204ENST00000375755 TIPARPQ7Z3E1 657 aaKnown RBP11.19□□□□□ -0.62
MSH5-204ENST00000375755 TMEM183AQ8IXX5 376 aa11.19□□□□□ -0.62
MSH5-204ENST00000375755 CLDND2Q8NHS1 167 aa11.19□□□□□ -0.62
MSH5-204ENST00000375755 POC1BQ8TC44 478 aa11.19□□□□□ -0.62
MSH5-204ENST00000375755 TMEM171Q8WVE6 324 aa11.19□□□□□ -0.62
MSH5-204ENST00000375755 GPR87Q9BY21 358 aa11.19□□□□□ -0.62
MSH5-204ENST00000375755 ZNF160Q9HCG1 818 aa11.19□□□□□ -0.62
MSH5-204ENST00000375755 LHFPL6Q9Y693 200 aa11.19□□□□□ -0.62
MSH5-204ENST00000375755 BOD1L1Q8NFC6 3051 aa11.18□□□□□ -0.62
MSH5-204ENST00000375755 C5orf63A6NC05 138 aa11.18□□□□□ -0.62
MSH5-204ENST00000375755 ZNF468Q5VIY5 522 aaPredicted RBP11.18□□□□□ -0.62
MSH5-204ENST00000375755 LIAT1Q6ZQX7 453 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms