RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 TMEM123Q8N131 208 aa18.28■□□□□ 0.52
UPF3A-202ENST00000375299 GNPNAT1Q96EK6 184 aaPredicted RBP18.28■□□□□ 0.52
UPF3A-202ENST00000375299 GFOD1Q9NXC2 390 aa18.28■□□□□ 0.52
UPF3A-202ENST00000375299 ELOA3CA0A087WX78 387 aaPredicted RBP18.28■□□□□ 0.52
UPF3A-202ENST00000375299 PROB1E7EW31 1015 aa18.28■□□□□ 0.52
UPF3A-202ENST00000375299 CYB5BO43169 146 aa18.28■□□□□ 0.52
UPF3A-202ENST00000375299 F10P00742 488 aa18.28■□□□□ 0.52
UPF3A-202ENST00000375299 CRYGSP22914 178 aa18.28■□□□□ 0.52
UPF3A-202ENST00000375299 DYNLT3P51808 116 aa18.28■□□□□ 0.52
UPF3A-202ENST00000375299 SLC35E3Q7Z769 313 aa18.28■□□□□ 0.52
UPF3A-202ENST00000375299 ZNF100Q8IYN0 542 aa18.28■□□□□ 0.52
UPF3A-202ENST00000375299 NAXEQ8NCW5 288 aa18.28■□□□□ 0.52
UPF3A-202ENST00000375299 SPACA9Q96E40 222 aaPredicted RBP18.28■□□□□ 0.52
UPF3A-202ENST00000375299 ST3GAL6Q9Y274 331 aa18.28■□□□□ 0.52
UPF3A-202ENST00000375299 PTRH2Q9Y3E5 179 aaKnown RBP18.28■□□□□ 0.52
UPF3A-202ENST00000375299 SHANK1Q9Y566 2161 aa18.27■□□□□ 0.52
UPF3A-202ENST00000375299 IGHV3-15A0A0B4J1V0 119 aa18.27■□□□□ 0.52
UPF3A-202ENST00000375299 NPIPA2E9PIF3 369 aa18.27■□□□□ 0.52
UPF3A-202ENST00000375299 NPIPA3F8WFD2 350 aa18.27■□□□□ 0.52
UPF3A-202ENST00000375299 PPP1R2P9O14990 202 aa18.27■□□□□ 0.52
UPF3A-202ENST00000375299 HIST1H1BP16401 226 aaKnown RBP18.27■□□□□ 0.52
UPF3A-202ENST00000375299 NKX6-1P78426 367 aaPredicted RBP18.27■□□□□ 0.52
UPF3A-202ENST00000375299 ZNF695Q8IW36 515 aa18.27■□□□□ 0.52
UPF3A-202ENST00000375299 HIST3H2BBQ8N257 126 aa18.27■□□□□ 0.52
UPF3A-202ENST00000375299 CLDND2Q8NHS1 167 aa18.27■□□□□ 0.52
UPF3A-202ENST00000375299 RBMXL1Q96E39 390 aaKnown RBP18.27■□□□□ 0.52
UPF3A-202ENST00000375299 ABHD14BQ96IU4 210 aa18.27■□□□□ 0.52
UPF3A-202ENST00000375299 CA14Q9ULX7 337 aa18.27■□□□□ 0.52
UPF3A-202ENST00000375299 SPAG17Q6Q759 2223 aa18.27■□□□□ 0.52
UPF3A-202ENST00000375299 EML6Q6ZMW3 1958 aa18.27■□□□□ 0.52
UPF3A-202ENST00000375299 PDCD6O75340 191 aa18.27■□□□□ 0.52
UPF3A-202ENST00000375299 PRSS12P56730 875 aa18.27■□□□□ 0.52
UPF3A-202ENST00000375299 AKR1C8PQ5T2L2 129 aa18.27■□□□□ 0.52
UPF3A-202ENST00000375299 PRAMEF20Q5VT98 475 aa18.27■□□□□ 0.52
UPF3A-202ENST00000375299 ODF3L1Q8IXM7 274 aa18.27■□□□□ 0.52
UPF3A-202ENST00000375299 TMEM56Q96MV1 263 aa18.27■□□□□ 0.52
UPF3A-202ENST00000375299 RASL10BQ96S79 203 aa18.27■□□□□ 0.52
UPF3A-202ENST00000375299 MAGT1Q9H0U3 335 aa18.27■□□□□ 0.52
UPF3A-202ENST00000375299 UBE2J1Q9Y385 318 aaPredicted RBP18.27■□□□□ 0.52
UPF3A-202ENST00000375299 TMEM56-RWDD3S4R434 201 aa18.27■□□□□ 0.52
UPF3A-202ENST00000375299 BCAT2O15382 392 aaPredicted RBP18.26■□□□□ 0.51
UPF3A-202ENST00000375299 LY86O95711 162 aa18.26■□□□□ 0.51
UPF3A-202ENST00000375299 TRGC2P03986 189 aa18.26■□□□□ 0.51
UPF3A-202ENST00000375299 SOD3P08294 240 aa18.26■□□□□ 0.51
UPF3A-202ENST00000375299 GLB1P16278 677 aa18.26■□□□□ 0.51
UPF3A-202ENST00000375299 MALLQ13021 153 aa18.26■□□□□ 0.51
UPF3A-202ENST00000375299 EXT1Q16394 746 aa18.26■□□□□ 0.51
UPF3A-202ENST00000375299 TMEM211Q6ICI0 200 aa18.26■□□□□ 0.51
UPF3A-202ENST00000375299 DPPA2Q7Z7J5 298 aa18.26■□□□□ 0.51
UPF3A-202ENST00000375299 ULBP2Q9BZM5 246 aa18.26■□□□□ 0.51
UPF3A-202ENST00000375299 ZNF576Q9H609 170 aa18.26■□□□□ 0.51
UPF3A-202ENST00000375299 IL36GQ9NZH8 169 aa18.26■□□□□ 0.51
UPF3A-202ENST00000375299 CCDC85CA6NKD9 419 aa18.26■□□□□ 0.51
UPF3A-202ENST00000375299 DKK1O94907 266 aa18.26■□□□□ 0.51
UPF3A-202ENST00000375299 HBE1P02100 147 aa18.26■□□□□ 0.51
UPF3A-202ENST00000375299 EPHA1P21709 976 aa18.26■□□□□ 0.51
UPF3A-202ENST00000375299 RUNX1Q01196 453 aa18.26■□□□□ 0.51
UPF3A-202ENST00000375299 RAB35Q15286 201 aa18.26■□□□□ 0.51
UPF3A-202ENST00000375299 CXorf66Q5JRM2 361 aaPredicted RBP18.26■□□□□ 0.51
UPF3A-202ENST00000375299 TBC1D26Q86UD7 250 aa18.26■□□□□ 0.51
UPF3A-202ENST00000375299 MAML2Q8IZL2 1156 aaPredicted RBP18.26■□□□□ 0.51
UPF3A-202ENST00000375299 SELENOHQ8IZQ5 122 aaKnown RBP18.26■□□□□ 0.51
UPF3A-202ENST00000375299 GPR61Q9BZJ8 451 aa18.26■□□□□ 0.51
UPF3A-202ENST00000375299 PCED1AQ9H1Q7 454 aa18.26■□□□□ 0.51
UPF3A-202ENST00000375299 ABCA7Q8IZY2 2146 aa18.26■□□□□ 0.51
UPF3A-202ENST00000375299 CST7O76096 145 aa18.25■□□□□ 0.51
UPF3A-202ENST00000375299 CEACAM1P13688 526 aa18.25■□□□□ 0.51
UPF3A-202ENST00000375299 RPL23AP62750 156 aaKnown RBP18.25■□□□□ 0.51
UPF3A-202ENST00000375299 TLE4Q04727 773 aa18.25■□□□□ 0.51
UPF3A-202ENST00000375299 BAXQ07812 192 aa18.25■□□□□ 0.51
UPF3A-202ENST00000375299 PDCD1Q15116 288 aa18.25■□□□□ 0.51
UPF3A-202ENST00000375299 KHDC3LQ587J8 217 aa18.25■□□□□ 0.51
UPF3A-202ENST00000375299 DNLZQ5SXM8 178 aa18.25■□□□□ 0.51
UPF3A-202ENST00000375299 FAM27BQ5VT28 67 aa18.25■□□□□ 0.51
UPF3A-202ENST00000375299 GFI1BQ5VTD9 330 aa18.25■□□□□ 0.51
UPF3A-202ENST00000375299 PLSCR2Q9NRY7 297 aa18.25■□□□□ 0.51
UPF3A-202ENST00000375299 FOXD3Q9UJU5 478 aaPredicted RBP18.25■□□□□ 0.51
UPF3A-202ENST00000375299 ADAM20O43506 726 aa18.25■□□□□ 0.51
UPF3A-202ENST00000375299 TIAF1O95411 115 aa18.25■□□□□ 0.51
UPF3A-202ENST00000375299 NRASP01111 189 aa18.25■□□□□ 0.51
UPF3A-202ENST00000375299 TCN2P20062 427 aa18.25■□□□□ 0.51
UPF3A-202ENST00000375299 GNRHRP30968 328 aa18.25■□□□□ 0.51
UPF3A-202ENST00000375299 TMEM42Q69YG0 159 aa18.25■□□□□ 0.51
UPF3A-202ENST00000375299 WDR74Q6RFH5 385 aaPredicted RBP18.25■□□□□ 0.51
UPF3A-202ENST00000375299 ZNF837Q96EG3 531 aaPredicted RBP18.25■□□□□ 0.51
UPF3A-202ENST00000375299 UCN2Q96RP3 112 aa18.25■□□□□ 0.51
UPF3A-202ENST00000375299 HIPK2Q9H2X6 1198 aa18.25■□□□□ 0.51
UPF3A-202ENST00000375299 ZNF442Q9H7R0 627 aa18.25■□□□□ 0.51
UPF3A-202ENST00000375299 SYNGR3O43761 229 aa18.24■□□□□ 0.51
UPF3A-202ENST00000375299 VAMP5O95183 116 aa18.24■□□□□ 0.51
UPF3A-202ENST00000375299 HLA-DRB3P79483 266 aa18.24■□□□□ 0.51
UPF3A-202ENST00000375299 MRPS34P82930 218 aaKnown RBP18.24■□□□□ 0.51
UPF3A-202ENST00000375299 PDZD11Q5EBL8 140 aa18.24■□□□□ 0.51
UPF3A-202ENST00000375299 DPPA3Q6W0C5 159 aa18.24■□□□□ 0.51
UPF3A-202ENST00000375299 CMTM1Q8IZ96 169 aa18.24■□□□□ 0.51
UPF3A-202ENST00000375299 CPNE4Q96A23 557 aaPredicted RBP18.24■□□□□ 0.51
UPF3A-202ENST00000375299 C14orf144Q96I85 54 aa18.24■□□□□ 0.51
UPF3A-202ENST00000375299 B4DEV8 164 aa18.24■□□□□ 0.51
UPF3A-202ENST00000375299 PTBP3O95758 552 aaKnown RBP18.24■□□□□ 0.51
UPF3A-202ENST00000375299 LCATP04180 440 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms