RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 LEPP41159 167 aa7.75□□□□□ -1.17
UBR4-201ENST00000375218 MYBPHQ13203 477 aa7.75□□□□□ -1.17
UBR4-201ENST00000375218 C6orf141Q5SZD1 244 aa7.75□□□□□ -1.17
UBR4-201ENST00000375218 DUSP18Q8NEJ0 188 aa7.75□□□□□ -1.17
UBR4-201ENST00000375218 EEF1AKMT1Q8WVE0 214 aa7.75□□□□□ -1.17
UBR4-201ENST00000375218 OR7D2Q96RA2 312 aa7.75□□□□□ -1.17
UBR4-201ENST00000375218 RNASE7Q9H1E1 156 aaKnown RBP7.75□□□□□ -1.17
UBR4-201ENST00000375218 TECRQ9NZ01 308 aaKnown RBP7.75□□□□□ -1.17
UBR4-201ENST00000375218 RHODO00212 210 aa7.75□□□□□ -1.17
UBR4-201ENST00000375218 ORC5O43913 435 aa7.75□□□□□ -1.17
UBR4-201ENST00000375218 EDF1O60869 148 aaKnown RBP7.75□□□□□ -1.17
UBR4-201ENST00000375218 C1orf105O95561 183 aa7.75□□□□□ -1.17
UBR4-201ENST00000375218 MYL9P24844 172 aa7.75□□□□□ -1.17
UBR4-201ENST00000375218 RPS20P60866 119 aaKnown RBP7.75□□□□□ -1.17
UBR4-201ENST00000375218 RPS24P62847 133 aaKnown RBP7.75□□□□□ -1.17
UBR4-201ENST00000375218 TGFBR3Q03167 851 aa7.75□□□□□ -1.17
UBR4-201ENST00000375218 SPHARQ15513 63 aa7.75□□□□□ -1.17
UBR4-201ENST00000375218 SPATA31B1PQ5VZV4 182 aa7.75□□□□□ -1.17
UBR4-201ENST00000375218 AWAT2Q6E213 333 aa7.75□□□□□ -1.17
UBR4-201ENST00000375218 CALHM3Q86XJ0 350 aa7.75□□□□□ -1.17
UBR4-201ENST00000375218 CBLN2Q8IUK8 224 aa7.75□□□□□ -1.17
UBR4-201ENST00000375218 LRRC25Q8N386 305 aaPredicted RBP7.75□□□□□ -1.17
UBR4-201ENST00000375218 WDYHV1Q96HA8 205 aa7.75□□□□□ -1.17
UBR4-201ENST00000375218 C1RLQ9NZP8 487 aa7.75□□□□□ -1.17
UBR4-201ENST00000375218 SIGLEC9Q9Y336 463 aa7.75□□□□□ -1.17
UBR4-201ENST00000375218 NUMA1Q14980 2115 aa7.75□□□□□ -1.17
UBR4-201ENST00000375218 ADAMTS20P59510 1910 aa7.75□□□□□ -1.17
UBR4-201ENST00000375218 TRAV30A0A087WSZ9 112 aa7.75□□□□□ -1.17
UBR4-201ENST00000375218 GXYLT2A0PJZ3 443 aa7.75□□□□□ -1.17
UBR4-201ENST00000375218 TMEM189A5PLL7 270 aa7.75□□□□□ -1.17
UBR4-201ENST00000375218 MLNRO43193 412 aa7.75□□□□□ -1.17
UBR4-201ENST00000375218 CLDN1O95832 211 aa7.75□□□□□ -1.17
UBR4-201ENST00000375218 RPL7P18124 248 aaKnown RBP7.75□□□□□ -1.17
UBR4-201ENST00000375218 RPS3P23396 243 aaKnown RBP eCLIP7.75□□□□□ -1.176e-12■□□□□ 8.2
UBR4-201ENST00000375218 FCARP24071 287 aa7.75□□□□□ -1.17
UBR4-201ENST00000375218 RPL10P27635 214 aaKnown RBP7.75□□□□□ -1.17
UBR4-201ENST00000375218 RPS27LQ71UM5 84 aaKnown RBP7.75□□□□□ -1.17
UBR4-201ENST00000375218 SPICQ8N5J4 248 aa7.75□□□□□ -1.17
UBR4-201ENST00000375218 ZMYND19Q96E35 227 aaPredicted RBP7.75□□□□□ -1.17
UBR4-201ENST00000375218 NBPF19A0A087WUL8 3843 aa7.75□□□□□ -1.17
UBR4-201ENST00000375218 ZNF705GA8MUZ8 300 aaPredicted RBP7.75□□□□□ -1.17
UBR4-201ENST00000375218 G3V2L1 256 aa7.75□□□□□ -1.17
UBR4-201ENST00000375218 RHEBQ15382 184 aa7.75□□□□□ -1.17
UBR4-201ENST00000375218 CD276Q5ZPR3 534 aa7.75□□□□□ -1.17
UBR4-201ENST00000375218 OPN5Q6U736 354 aa7.75□□□□□ -1.17
UBR4-201ENST00000375218 CBLL1Q75N03 491 aa7.75□□□□□ -1.17
UBR4-201ENST00000375218 UMODL1-AS1Q8N2C9 162 aa7.75□□□□□ -1.17
UBR4-201ENST00000375218 SLC30A7Q8NEW0 376 aa7.75□□□□□ -1.17
UBR4-201ENST00000375218 OR11H4Q8NGC9 324 aa7.75□□□□□ -1.17
UBR4-201ENST00000375218 SSMEM1Q8WWF3 244 aa7.75□□□□□ -1.17
UBR4-201ENST00000375218 LIN37Q96GY3 246 aaPredicted RBP7.75□□□□□ -1.17
UBR4-201ENST00000375218 TEX37Q96LM6 180 aa7.75□□□□□ -1.17
UBR4-201ENST00000375218 APOL4Q9BPW4 351 aa7.75□□□□□ -1.17
UBR4-201ENST00000375218 TNRC6BQ9UPQ9 1833 aaKnown RBP7.74□□□□□ -1.17
UBR4-201ENST00000375218 HAND1O96004 215 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 GCGP01275 180 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 SEMG1P04279 462 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 TDGF1P13385 188 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 GABRA2P47869 451 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 BTG1P62324 171 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 RPS4XP62701 263 aaKnown RBP7.74□□□□□ -1.17
UBR4-201ENST00000375218 BTG2P78543 158 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 ZNF788Q6ZQV5 615 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 BADQ92934 168 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 NRTNQ99748 197 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 SLC25A51Q9H1U9 297 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 HES4Q9HCC6 221 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 ACOT13Q9NPJ3 140 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 FLRT3Q9NZU0 649 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 IGHV2-70DA0A0C4DH43 119 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 OR51F1A6NGY5 319 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 C10orf142B7Z368 130 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 NDUFA7O95182 113 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 PRKACGP22612 351 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 PRDX3P30048 256 aaKnown RBP7.74□□□□□ -1.17
UBR4-201ENST00000375218 DLX6P56179 175 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 EIF4HQ15056 248 aaKnown RBP7.74□□□□□ -1.17
UBR4-201ENST00000375218 CDSNQ15517 529 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 ZIC1Q15915 447 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 GLT8D1Q68CQ7 371 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 RFLNAQ6ZTI6 216 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 CDC20BQ86Y33 519 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 MMD2Q8IY49 270 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 ZNF664Q8N3J9 261 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 GPR148Q8TDV2 347 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 ZNF436Q9C0F3 470 aaPredicted RBP7.74□□□□□ -1.17
UBR4-201ENST00000375218 PCDH15Q96QU1 1955 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 FCN1O00602 326 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 SH2D1BO14796 132 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 ZG16O60844 167 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 NUDT3O95989 172 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 UMODP07911 640 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 TRAPPC2P0DI81 140 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 TRAPPC2BP0DI82 140 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 RBM11P57052 281 aaKnown RBP7.74□□□□□ -1.17
UBR4-201ENST00000375218 ERVFC1-1P60608 527 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 KIR3DS1Q14943 382 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 TRIP6Q15654 476 aaKnown RBP7.74□□□□□ -1.17
UBR4-201ENST00000375218 TMEM97Q5BJF2 176 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 ZNF684Q5T5D7 378 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms